BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00026446
         (1031 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ...    64   8e-08
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]               64   1e-07
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]                        64   1e-07
gb|ABB47331.1| retrotransposon protein, putative, Ty1-copia subc...    64   1e-07
gb|AAK13130.1|AC083945_5 Putative gag-pol polyprotein [Oryza sat...    64   1e-07
gb|EEE68923.1| hypothetical protein OsJ_27787 [Oryza sativa Japo...    63   2e-07
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]    63   2e-07
gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subc...    62   3e-07
gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subc...    62   3e-07
gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subc...    62   4e-07
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]               62   4e-07
gb|EEC80481.1| hypothetical protein OsI_22711 [Oryza sativa Indi...    62   4e-07
gb|EEC68906.1| hypothetical protein OsI_37574 [Oryza sativa Indi...    62   4e-07
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc...    62   5e-07
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]               62   5e-07
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]               62   5e-07
dbj|BAB03249.1| polyprotein [Oryza sativa]                             61   7e-07
gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subc...    61   7e-07
gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sa...    61   7e-07
gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subc...    61   7e-07

>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score = 64.3 bits (155), Expect = 8e-08
 Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
 Frame = +2

Query: 341 YKCGQQGHCARDCPRNKDGFR*YLANFHKDLASLAMLSEDYDCNEILLMPAILK---SQR 511
           + CG+ GH A+DCP  KD          K  A++ +  +         +P +L    S  
Sbjct: 216 FVCGKPGHWAKDCPERKD----------KKSANMVISEDGGTLGYGKFLPTVLSVCHSPD 265

Query: 512 EWVSDGAAIMHVCNNHLIYNNYK-DCNKHVYMRDGSRLLLHGVSEVLLQFSDGSVQVIRN 688
            WV  GA I HVC +  ++++Y+      + M +GS   +HGV  V L+F+ G +  ++N
Sbjct: 266 WWVDTGANI-HVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKIVQLKN 324

Query: 689 VRYVSEMKWNLISVLIL 739
           V++V  +K NL+S  +L
Sbjct: 325 VQHVPSIKKNLVSGSLL 341


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
 Frame = +2

Query: 305 QRKSNIFQR*LLYKCGQQGHCARDCPRNKDGFR*YLANFHKDLASLAMLSEDYDCNEILL 484
           +RK+NI      Y CG +GH  ++C  NK           +   S   ++   D  EIL 
Sbjct: 223 RRKNNI----KCYGCGMKGHVKKECWNNKKNGE----KNSEATTSQGCVASTSDDGEILY 274

Query: 485 MPAILKSQRE------WVSDGAAIMHVCNNHLIYNNYKDCNK-HVYMRDGSRLLLHGVSE 643
             A   S+ E      W+ D  A  H+  +   + +Y+  ++  VYM +   L + GV  
Sbjct: 275 SEAATSSEGERQLNDVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGT 334

Query: 644 VLLQFSDGSVQVIRNVRYVSEMKWNLISVLILK*LGMG*STKNGVMSV 787
           + L+  DG+V+ I+ VR+V  +K NL+SV  L  LG    +++G++ V
Sbjct: 335 IRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHSESGILKV 382


>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
          Length = 1264

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = +2

Query: 341 YKCGQQGHCARDCPRNKDGFR*YLANFHKDLASLAMLSEDYDCNEILLMPAILKSQREWV 520
           + CG+ GH A+DCP   D  R    N +  +AS     ED     +  + ++ +S   W+
Sbjct: 209 FACGEAGHFAKDCPDRADR-RGKKGNVNTVIASN---EEDKGYGNLPFIFSVFQSPSWWL 264

Query: 521 SDGAAIMHVCNNHLIYNNYKDC-NKHVYMRDGSRLLLHGVSEVLLQFSDGSVQVIRNVRY 697
             GA + HVC++  ++++Y+   +  V M +GS   +HG   V L+F+ G +  ++NV +
Sbjct: 265 DTGANV-HVCSDINLFSSYQGARDSSVLMGNGSHASVHGTGTVDLKFTSGKIVQLKNVHH 323

Query: 698 VSEMKWNLISVLIL 739
           V  +  NL+S  +L
Sbjct: 324 VPSIHKNLVSGTLL 337


>gb|ABB47331.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1022

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
 Frame = +2

Query: 341 YKCGQQGHCARDCPRNKDGFR*YLANFHKDLASLAMLSEDYDCNEILLMPAILK---SQR 511
           + CG+ GH A+DCP  KD          K  A++ +  E         +P +L    S  
Sbjct: 281 FVCGKPGHWAKDCPERKD----------KKSANMVISEEGGTLGYGKFLPTVLSICYSPD 330

Query: 512 EWVSDGAAIMHVCNNHLIYNNYK-DCNKHVYMRDGSRLLLHGVSEVLLQFSDGSVQVIRN 688
            WV  GA I HVC +  ++++Y+      + M +GS   +HGV  V L+F+ G +  ++N
Sbjct: 331 WWVDTGANI-HVCVDISLFSSYQVGRGSSLLMGNGSLAAVHGVDTVDLKFTLGKIVQLKN 389

Query: 689 VRYVSEMKWNLISVLIL 739
           V++V  +K NL+S  +L
Sbjct: 390 VQHVPSIKKNLVSGSLL 406


>gb|AAK13130.1|AC083945_5 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1363

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
 Frame = +2

Query: 341 YKCGQQGHCARDCPRNKDGFR*YLANFHKDLASLAMLSEDYDCNEILLMPAILK---SQR 511
           + CG+ GH A+DCP  KD          K  A++ +  E         +P +L    S  
Sbjct: 401 FVCGKPGHWAKDCPERKD----------KKSANMVISEEGGTLGYGKFLPTVLSICYSPD 450

Query: 512 EWVSDGAAIMHVCNNHLIYNNYK-DCNKHVYMRDGSRLLLHGVSEVLLQFSDGSVQVIRN 688
            WV  GA I HVC +  ++++Y+      + M +GS   +HGV  V L+F+ G +  ++N
Sbjct: 451 WWVDTGANI-HVCVDISLFSSYQVGRGSSLLMGNGSLAAVHGVDTVDLKFTLGKIVQLKN 509

Query: 689 VRYVSEMKWNLISVLIL 739
           V++V  +K NL+S  +L
Sbjct: 510 VQHVPSIKKNLVSGSLL 526


>gb|EEE68923.1| hypothetical protein OsJ_27787 [Oryza sativa Japonica Group]
          Length = 349

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
 Frame = +2

Query: 341 YKCGQQGHCARDCPRNKDGFR*YLANFHKDLASLAMLSEDYDCNEILLMPAILK---SQR 511
           + CG+ GH A+DCP  KD          +  A++ +  +        ++P +L    S  
Sbjct: 117 FVCGKSGHWAKDCPERKD----------RKSANMIISEDGGTSGYGKILPTVLSVFHSPD 166

Query: 512 EWVSDGAAIMHVCNNHLIYNNYK-DCNKHVYMRDGSRLLLHGVSEVLLQFSDGSVQVIRN 688
            WV  GA I HVC +  ++++Y+      + M +GS   +HGV  V L+F+ G    ++N
Sbjct: 167 WWVDTGANI-HVCADFSLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKN 225

Query: 689 VRYVSEMKWNLISVLIL 739
           V++V  +K NL+S  +L
Sbjct: 226 VQHVLSIKKNLVSGSLL 242


>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
          Length = 894

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
 Frame = +2

Query: 347 CGQQGHCARDCPRNKDGFR*YLANFHKDLASLAMLSEDYDCNEILLMPAILKSQREWVSD 526
           C ++GH  +DCP  +        N         M+ + YD N  +L  A + S +EW+ D
Sbjct: 231 CHKEGHFKKDCPDMRQNTXKKTMNE----GDATMILDGYD-NAGVLNVAEVDSGKEWILD 285

Query: 527 GAAIMHVCNNHLIYNNYKDCNK-HVYMRDGSRLLLHGVSEVLLQFSDGSVQVIRNVRYVS 703
                H+C     + ++K+ N  HV + +     + G   V ++  DG  +V+ ++RY+ 
Sbjct: 286 SGCSFHMCPIKAWFEDFKEANGGHVLLGNNKHCKILGTGTVKIKHYDGIERVLEDIRYIP 345

Query: 704 EMKWNLISVLILK*LG 751
           E+K NLIS+ +L  LG
Sbjct: 346 ELKMNLISLGMLDKLG 361


>gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1453

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
 Frame = +2

Query: 341 YKCGQQGHCARDCPRNKDGFR*YLANFHKDLASLAMLSEDYDCNEILLMPAILK---SQR 511
           + CG+ GH A+DCP  KD          +  A++ +           ++P +L    S  
Sbjct: 400 FVCGKSGHWAKDCPERKD----------RKSANMIISEGGGTSGYGKILPTVLSVFHSPD 449

Query: 512 EWVSDGAAIMHVCNNHLIYNNYK-DCNKHVYMRDGSRLLLHGVSEVLLQFSDGSVQVIRN 688
            WV  GA I HVC +  ++++Y+ +    + M +GS   +HGV  V L+F+ G    ++N
Sbjct: 450 WWVDTGANI-HVCADISLFSSYQVERGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKN 508

Query: 689 VRYVSEMKWNLISVLIL 739
           V++V  +K NL+S  +L
Sbjct: 509 VQHVPSIKKNLVSGSLL 525


>gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1287

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
 Frame = +2

Query: 341 YKCGQQGHCARDCPRNKDGFR*YLANFHKDLASLAMLSEDYDCNEILLMPAILK---SQR 511
           + CG+ GH A+DCP  KD          K  A++ +           ++P +L    S  
Sbjct: 360 FVCGKSGHWAKDCPERKD----------KKSANMIISEGGGTSGYGKILPTVLSVFHSPD 409

Query: 512 EWVSDGAAIMHVCNNHLIYNNYK-DCNKHVYMRDGSRLLLHGVSEVLLQFSDGSVQVIRN 688
            WV  GA I HVC +  ++++Y+      + M +GS   +HGV  V L+F+ G    ++N
Sbjct: 410 WWVDTGANI-HVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKN 468

Query: 689 VRYVSEMKWNLISVLIL 739
           V++V  +K NL+S  +L
Sbjct: 469 VQHVPSIKKNLVSGSLL 485


>gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1452

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
 Frame = +2

Query: 341 YKCGQQGHCARDCPRNKDGFR*YLANFHKDLASLAMLSEDYDCNEILLMPAILK---SQR 511
           + CG+ GH A+DCP  KD          +  A++ +           ++P +L    S  
Sbjct: 403 FVCGKSGHWAKDCPERKD----------RKSANMIISEGGGTSGYGKILPTVLSVFHSPD 452

Query: 512 EWVSDGAAIMHVCNNHLIYNNYK-DCNKHVYMRDGSRLLLHGVSEVLLQFSDGSVQVIRN 688
            WV  GA I HVC +  ++++Y+      + M +GS  ++HGV  V L+F+ G    ++N
Sbjct: 453 WWVDTGANI-HVCADISLFSSYQVGRGSSLLMGNGSLAVVHGVGTVDLKFTSGKTVQLKN 511

Query: 689 VRYVSEMKWNLISVLIL 739
           V++V  +K NL+S  +L
Sbjct: 512 VQHVPSIKKNLVSGSLL 528


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
 Frame = +2

Query: 305 QRKSNIFQR*LLYKCGQQGHCARDCPR-NKDGFR*YLANFHKDLASLAMLSEDYDCNEIL 481
           +RK NI      Y CG +GH  ++C    K+G +   A+      S   ++   D  EIL
Sbjct: 223 RRKKNI----KCYGCGMKGHVKKECWNIKKNGEKNSEAS-----TSQGCVASTSDDGEIL 273

Query: 482 LMPAILKSQRE------WVSDGAAIMHVCNNHLIYNNYKDCNK-HVYMRDGSRLLLHGVS 640
              A   S+ E      W+ D  A  H+  +   + +Y+  ++  VYM +   L + GV 
Sbjct: 274 YSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVG 333

Query: 641 EVLLQFSDGSVQVIRNVRYVSEMKWNLISVLILK*LGMG*STKNGVMSV 787
            + L+  DG+V+ I+ VR+V  +K NL+SV  L  LG    T++G++ V
Sbjct: 334 TIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKV 382


>gb|EEC80481.1| hypothetical protein OsI_22711 [Oryza sativa Indica Group]
          Length = 360

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
 Frame = +2

Query: 341 YKCGQQGHCARDCPRNKDGFR*YLANFHKDL-ASLAMLSEDYDCNEILLMPAILKSQREW 517
           + CGQ GH AR CP+ K G +       K    ++    +      +  + ++ +S   W
Sbjct: 113 FVCGQPGHLARKCPQRK-GMKAPAGQTSKSANVTIGNTGDGSGYGNLPTIFSVNQSTNWW 171

Query: 518 VSDGAAIMHVCNNHLIYNNYKDCN-KHVYMRDGSRLLLHGVSEVLLQFSDGSVQVIRNVR 694
           V  GA I HVC +  ++++Y+      V M +GS L +HGV  V L+F+ G +  ++NV+
Sbjct: 172 VDTGANI-HVCADISLFSSYQVARGSTVLMGNGSHLYVHGVGTVDLKFTSGKIVQLKNVQ 230

Query: 695 YVSEMKWNLIS 727
           +V  +  NL+S
Sbjct: 231 HVPSIDRNLVS 241


>gb|EEC68906.1| hypothetical protein OsI_37574 [Oryza sativa Indica Group]
          Length = 342

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
 Frame = +2

Query: 341 YKCGQQGHCARDCPRNKDGFR*YLANFHKDLASLAMLSEDYDCNEILLMPAILK---SQR 511
           + CG+ GH A+DCP +KD          +  A++ +           ++P +L    S  
Sbjct: 215 FVCGKPGHWAKDCPEHKD----------RKSANMVISEGGGTSGYGKILPTVLSVFHSPD 264

Query: 512 EWVSDGAAIMHVCNNHLIYNNYK-DCNKHVYMRDGSRLLLHGVSEVLLQFSDGSVQVIRN 688
            WV  GA I HVC +  ++++Y+      + M +GS   +HGV  V L+F+ G    ++N
Sbjct: 265 WWVDTGANI-HVCADIFLFSSYQVGRGSSLLMGNGSLAAVHGVGMVDLKFTSGKTVQLKN 323

Query: 689 VRYVSEMKWNLISVLIL 739
           V++V  +K NL+S  +L
Sbjct: 324 VQHVPSIKKNLVSGSLL 340


>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1448

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
 Frame = +2

Query: 341 YKCGQQGHCARDCPRNKDGFR*YLANFHKDLASLAMLSEDYDCNEILLMPAILK---SQR 511
           + CG+ GH A+DCP  KD          +  A++ +           ++P +L    S  
Sbjct: 395 FVCGKSGHWAKDCPERKD----------RKSANMVISEGGGTSGYGKILPTVLSVFHSPD 444

Query: 512 EWVSDGAAIMHVCNNHLIYNNYK-DCNKHVYMRDGSRLLLHGVSEVLLQFSDGSVQVIRN 688
            WV  GA I HVC +  ++++Y+      + M +GS   +HGV  V L+F+ G    ++N
Sbjct: 445 WWVDTGANI-HVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKN 503

Query: 689 VRYVSEMKWNLISVLIL 739
           V++V  +K NL+S  +L
Sbjct: 504 VQHVPSIKKNLVSGSLL 520


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
 Frame = +2

Query: 305 QRKSNIFQR*LLYKCGQQGHCARDCPR-NKDGFR*YLANFHKDLASLAMLSEDYDCNEIL 481
           +RK NI      Y CG +GH  ++C    K+G +   A+      S   ++   D  EIL
Sbjct: 223 RRKKNI----KCYGCGMKGHVKKECWNIKKNGEKNSEAS-----TSQGCVASTSDDGEIL 273

Query: 482 LMPAILKSQRE------WVSDGAAIMHVCNNHLIYNNYKDCNK-HVYMRDGSRLLLHGVS 640
              A   S+ E      W+ D  A  H+  +   + +Y+  ++  VYM +   L + GV 
Sbjct: 274 YSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVG 333

Query: 641 EVLLQFSDGSVQVIRNVRYVSEMKWNLISVLILK*LGMG*STKNGVMSV 787
            + L+  DG+V+ I+ VR+V  +K NL+SV  L  LG    T++G++ V
Sbjct: 334 TIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKV 382


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
 Frame = +2

Query: 305 QRKSNIFQR*LLYKCGQQGHCARDCPR-NKDGFR*YLANFHKDLASLAMLSEDYDCNEIL 481
           +RK NI      Y CG +GH  ++C    K+G +   A+      S   ++   D  EIL
Sbjct: 223 RRKKNI----KCYGCGMKGHVKKECWNIKKNGEKNSEAS-----TSQGCVASTSDDGEIL 273

Query: 482 LMPAILKSQRE------WVSDGAAIMHVCNNHLIYNNYKDCNK-HVYMRDGSRLLLHGVS 640
              A   S+ E      W+ D  A  H+  +   + +Y+  ++  VYM +   L + GV 
Sbjct: 274 YSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVG 333

Query: 641 EVLLQFSDGSVQVIRNVRYVSEMKWNLISVLILK*LGMG*STKNGVMSV 787
            + L+  DG+V+ I+ VR+V  +K NL+SV  L  LG    T++G++ V
Sbjct: 334 TIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKV 382


>dbj|BAB03249.1| polyprotein [Oryza sativa]
          Length = 1268

 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
 Frame = +2

Query: 341 YKCGQQGHCARDCPRNKDGFR*YLANFHKDLASLAMLSEDYDCNEILLMPAILK---SQR 511
           + CG+ GH A+DCP  KD          +  A++ +           ++P +L    S  
Sbjct: 215 FVCGKSGHWAKDCPERKD----------RKSANMIISEGGGTSGYGKILPTVLSVFHSPD 264

Query: 512 EWVSDGAAIMHVCNNHLIYNNYK-DCNKHVYMRDGSRLLLHGVSEVLLQFSDGSVQVIRN 688
            WV  GA I HVC +  ++++Y+      + M +GS   +HGV  V L+F+ G    ++N
Sbjct: 265 WWVDTGANI-HVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKN 323

Query: 689 VRYVSEMKWNLISVLIL 739
           V++V  +K NL+S  +L
Sbjct: 324 VQHVPSIKKNLVSGSLL 340


>gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1298

 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
 Frame = +2

Query: 341 YKCGQQGHCARDCPRNKDGFR*YLANFHKDLASLAMLSEDYDCNEILLMPAILK---SQR 511
           + CG+ GH A+DCP  KD          +  A++ +           ++P +L    S  
Sbjct: 360 FVCGKSGHWAKDCPERKD----------RKSANMIISEGGGTSGYGKILPTVLSVFHSPD 409

Query: 512 EWVSDGAAIMHVCNNHLIYNNYK-DCNKHVYMRDGSRLLLHGVSEVLLQFSDGSVQVIRN 688
            WV  GA I HVC +  ++++Y+      + M +GS   +HGV  V L+F+ G    ++N
Sbjct: 410 WWVDTGANI-HVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKN 468

Query: 689 VRYVSEMKWNLISVLIL 739
           V++V  +K NL+S  +L
Sbjct: 469 VQHVPSIKKNLVSGSLL 485


>gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1408

 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
 Frame = +2

Query: 341 YKCGQQGHCARDCPRNKDGFR*YLANFHKDLASLAMLSEDYDCNEILLMPAILK---SQR 511
           + CG+ GH A+DCP  KD          +  A++ +           ++P +L    S  
Sbjct: 355 FVCGKSGHWAKDCPERKD----------RKSANMIISEGGGTSGYGKILPTVLSVFHSPD 404

Query: 512 EWVSDGAAIMHVCNNHLIYNNYK-DCNKHVYMRDGSRLLLHGVSEVLLQFSDGSVQVIRN 688
            WV  GA I HVC +  ++++Y+      + M +GS   +HGV  V L+F+ G    ++N
Sbjct: 405 WWVDTGANI-HVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKN 463

Query: 689 VRYVSEMKWNLISVLIL 739
           V++V  +K NL+S  +L
Sbjct: 464 VQHVPSIKKNLVSGSLL 480


>gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1457

 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
 Frame = +2

Query: 341 YKCGQQGHCARDCPRNKDGFR*YLANFHKDLASLAMLSEDYDCNEILLMPAILK---SQR 511
           + CG+ GH A+DCP  KD          +  A++ +           ++P +L    S  
Sbjct: 404 FVCGKSGHWAKDCPERKD----------RKSANMIISEGGGTSGYGKILPTVLSVFHSPD 453

Query: 512 EWVSDGAAIMHVCNNHLIYNNYK-DCNKHVYMRDGSRLLLHGVSEVLLQFSDGSVQVIRN 688
            WV  GA I HVC +  ++++Y+      + M +GS   +HGV  V L+F+ G    ++N
Sbjct: 454 WWVDTGANI-HVCADISLFSSYQVGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKN 512

Query: 689 VRYVSEMKWNLISVLIL 739
           V++V  +K NL+S  +L
Sbjct: 513 VQHVPSIKKNLVSGSLL 529