BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00007103
         (2129 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   966   0.0  
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   959   0.0  
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   947   0.0  
ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put...   947   0.0  
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put...   947   0.0  
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin...   944   0.0  
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              936   0.0  
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun...   936   0.0  
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...   926   0.0  
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...   915   0.0  
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...   908   0.0  
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no...   905   0.0  
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   892   0.0  
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub...   883   0.0  
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub...   882   0.0  
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub...   879   0.0  
gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus...   877   0.0  
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag...   877   0.0  
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub...   876   0.0  
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise...   870   0.0  

>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  966 bits (2498), Expect = 0.0
 Identities = 480/709 (67%), Positives = 579/709 (81%), Gaps = 1/709 (0%)
 Frame = -1

Query: 2126 HLGELKRLLSIICLKCLRMKKGQIRKNGEKDKSSACTHCLDMPPITVRESNLKDGSFCLE 1947
            H+ ELKR+LS++CLKCL+++K ++  NG  ++  A   C D P ++VRE    +G+  LE
Sbjct: 85   HVSELKRMLSLLCLKCLKIRKSKVTNNGITEQLLAPC-CQDSPQVSVREFRPTEGACFLE 143

Query: 1946 LKVP-KSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRIPAETKKKLAAKGYFPQ 1770
            LK+P +S+ ++  W+FL RYG+ YG+   R LLP EV+EIL+RIP +T+KKL  KGYFPQ
Sbjct: 144  LKIPSRSRPKDGFWDFLARYGYRYGHNLSRILLPSEVMEILRRIPEDTRKKLVRKGYFPQ 203

Query: 1769 DGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNFESHE 1590
            DGYILQ LPVPPNCLSVPDISDG +IMSSD+SVSMLKKVLKQ E+IK SRSG PNFESH+
Sbjct: 204  DGYILQYLPVPPNCLSVPDISDGVSIMSSDLSVSMLKKVLKQIEVIKGSRSGEPNFESHK 263

Query: 1589 VEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKGSGFS 1410
            +EAN LQS+I QYL VRG+ K  R + ++FG + E +++S KAW+EKM+TLFI KGSGFS
Sbjct: 264  IEANNLQSSIEQYLEVRGTAKTSRSLDTRFGSSKEPNESSTKAWLEKMRTLFIRKGSGFS 323

Query: 1409 SRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGGSMYS 1230
            SRSVITGDAYKRV+EIGLP EIAQ+ITFEE+V VHNM HLQ LVD+KLCLTYRDG S YS
Sbjct: 324  SRSVITGDAYKRVNEIGLPFEIAQRITFEERVNVHNMKHLQNLVDEKLCLTYRDGLSTYS 383

Query: 1229 LKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKINPLIC 1050
            L+EGSKGHT L+ GQVVHRRIMDGDIVFINRPP+THKHSLQA SVY+HD+HTVKINPLIC
Sbjct: 384  LREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLIC 443

Query: 1049 SPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSLKIMF 870
             PL ADFDGDC+HLFYPQSL AKAEVLELFSVE+QLLSSHSG LNLQLA D+LLSLK++F
Sbjct: 444  GPLSADFDGDCVHLFYPQSLGAKAEVLELFSVEKQLLSSHSGNLNLQLATDSLLSLKVLF 503

Query: 869  KKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQWTALQILQNALPADFDCSGERYVIR 690
            ++YFL KA AQQL M+VS  L  PALLK+    P WTALQILQ ALP+ FDC GER+ I 
Sbjct: 504  ERYFLNKAAAQQLVMFVSMSLPRPALLKSPCSGPCWTALQILQTALPSYFDCIGERHWIS 563

Query: 689  QSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYSVSLED 510
            +S I+K DYNRDV+QS+ N+I+ ++F +KG  + LK F+SLQPLLMEN+FSEG+SVSLED
Sbjct: 564  KSAILKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLED 623

Query: 509  FCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKSSTLGN 330
            F IP  +T+ +QKNV+ IS LLY+LRS YNE+++LQ ENHLR  KVPV NFIL SS LGN
Sbjct: 624  FSIPSEVTQNIQKNVEDISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFILNSSALGN 683

Query: 329  LIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCPSEAFG 150
            LIDSKS+S+INKVV           ++G+ Y+RTLVE M   F+ K+   G D PS  FG
Sbjct: 684  LIDSKSDSAINKVVQQIGFLGQQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADYPSGEFG 743

Query: 149  LIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
            LIRSCFFHGL+PYE++V SIS+RE++VRSSRGL+EPGTLFKNLMAILRD
Sbjct: 744  LIRSCFFHGLDPYEEMVHSISTREIIVRSSRGLSEPGTLFKNLMAILRD 792


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  959 bits (2479), Expect = 0.0
 Identities = 475/710 (66%), Positives = 576/710 (81%), Gaps = 1/710 (0%)
 Frame = -1

Query: 2129 SHLGELKRLLSIICLKCLRMKKGQIRKNGEKDKSSACTHCLDMPPITVRESNLKDGSFCL 1950
            +H+ ELK++LS++CLKCL+MKK +     E+  SS C    D   +T+RE+   DG+  L
Sbjct: 86   NHITELKKMLSLLCLKCLKMKKTKNIGFAERLLSSCCE---DASQVTIREAKKADGASYL 142

Query: 1949 ELKVP-KSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRIPAETKKKLAAKGYFP 1773
            +LKVP ++ L+E  W+FLERYGF YG    RTLLPCEV E+LK+IP ET+KKLA +GY+P
Sbjct: 143  QLKVPSRTSLQERFWDFLERYGFRYGDNFTRTLLPCEVKEMLKKIPNETRKKLAGRGYYP 202

Query: 1772 QDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNFESH 1593
            QDGYILQ LPVPPNCLSVP+ISDG T+MSSD +VSMLKK+LKQ EIIK SRSG PNFESH
Sbjct: 203  QDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESH 262

Query: 1592 EVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKGSGF 1413
            EVEAN+LQ A+ QYL VRG+ K  RGI ++FGVN E +D S KAW+EKM+TLFI KGSGF
Sbjct: 263  EVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGF 322

Query: 1412 SSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGGSMY 1233
            SSRSVITGDAYK V+EIG+P E+AQ+ITFEE+V+VHN+ +LQELVDKKLCLTYRDG S Y
Sbjct: 323  SSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQELVDKKLCLTYRDGSSAY 382

Query: 1232 SLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKINPLI 1053
            SL+EGS GHT LK GQ+VHRRIMDGDIVFINRPP+THKHSLQA  VY+HD+H VKINPLI
Sbjct: 383  SLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHVVKINPLI 442

Query: 1052 CSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSLKIM 873
            C PL ADFDGDCIHLFYPQS+AAKAEVL LFSVE+QLLSSHSG LNLQLAND+LLSLK+M
Sbjct: 443  CGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMM 502

Query: 872  FKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQWTALQILQNALPADFDCSGERYVI 693
            F+KYFL KA AQQLAM+VSS L  PALL        WTALQILQ  LPA FDC G+ Y+I
Sbjct: 503  FRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTALQILQTVLPASFDCHGDSYLI 562

Query: 692  RQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYSVSLE 513
            + S  +KFD++RD + S+ N+I+ ++F +KG ++ LK F+SLQPLLME+IFSEG+SV L+
Sbjct: 563  KNSNFLKFDFDRDAMPSLINEILTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLD 622

Query: 512  DFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKSSTLG 333
            D+ +P +  + LQKN+Q +SPLLY LRST+NE+VELQ+ENHLR VKVP  NFILK S+LG
Sbjct: 623  DYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLENHLRSVKVPFTNFILKLSSLG 682

Query: 332  NLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCPSEAF 153
             L DSKSES+INKVV           D+GR Y+++L+ED+ + F  +++   ID PS  F
Sbjct: 683  KLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDYPSAEF 742

Query: 152  GLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
            GL++ CFFHGL+PYE++V SIS+REV+VRSSRGLTEPGTLFKNLMAILRD
Sbjct: 743  GLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRD 792


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1-like [Cucumis sativus]
          Length = 2019

 Score =  947 bits (2449), Expect = 0.0
 Identities = 471/711 (66%), Positives = 573/711 (80%), Gaps = 2/711 (0%)
 Frame = -1

Query: 2129 SHLGELKRLLSIICLKCLRMKKGQI-RKNGEKDKSSACTHCLDMPPITVRESNLKDGSFC 1953
            +H+ ELK++LS++CLKCL+MKK +   KN    +    + C D   +T+RE+   DG+  
Sbjct: 112  NHITELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVTIREAKKADGASY 171

Query: 1952 LELKVP-KSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRIPAETKKKLAAKGYF 1776
            L+LKVP ++ L+E  W+FLERYGF YG    RTLL   V E+LK+IP ET+KKLA +GY+
Sbjct: 172  LQLKVPSRTSLQERFWDFLERYGFRYGDNFTRTLLSVMVKEMLKKIPNETRKKLAGRGYY 231

Query: 1775 PQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNFES 1596
            PQDGYILQ LPVPPNCLSVP+ISDG T+MSSD +VSMLKK+LKQ EIIK SRSG PNFES
Sbjct: 232  PQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFES 291

Query: 1595 HEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKGSG 1416
            HEVEAN+LQ A+ QYL VRG+ K  RGI ++FGVN E +D S KAW+EKM+TLFI KGSG
Sbjct: 292  HEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSG 351

Query: 1415 FSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGGSM 1236
            FSSRSVITGDAYK V+EIG+P E+AQ+ITFEE+V+VHN+ +LQELVDKKLCLTYRDG S 
Sbjct: 352  FSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQELVDKKLCLTYRDGSSA 411

Query: 1235 YSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKINPL 1056
            YSL+EGS GHT LK GQ+VHRRIMDGDIVFINRPP+THKHSLQA  VY+HD+H VKINPL
Sbjct: 412  YSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHVVKINPL 471

Query: 1055 ICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSLKI 876
            IC PL ADFDGDCIHLFYPQS+AAKAEVL LFSVE+QLLSSHSG LNLQLAND+LLSLK+
Sbjct: 472  ICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKM 531

Query: 875  MFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQWTALQILQNALPADFDCSGERYV 696
            MF+KYFL KA AQQLAM+VSS L  PALL        WTALQILQ  LPA FDC G+ Y+
Sbjct: 532  MFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTALQILQTVLPASFDCHGDSYL 591

Query: 695  IRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYSVSL 516
            I+ S  +KFD++RD + S+ N+I+ ++F +KG ++ LK F+SLQPLLME+IFSEG+SV L
Sbjct: 592  IKNSNFLKFDFDRDAMPSLINEILTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGL 651

Query: 515  EDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKSSTL 336
            +D+ +P +  + LQKN+Q +SPLLY LRST+NE+VELQ+ENHLR VKVP  NFILK S+L
Sbjct: 652  DDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLENHLRSVKVPFTNFILKLSSL 711

Query: 335  GNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCPSEA 156
            G L DSKSES+INKVV           D+GR Y+++L+ED+ + F  +++   ID PS  
Sbjct: 712  GKLFDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDYPSAE 771

Query: 155  FGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
            FGL++ CFFHGL+PYE++V SIS+REV+VRSSRGLTEPGTLFKNLMAILRD
Sbjct: 772  FGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRD 822


>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
            [Theobroma cacao] gi|508727914|gb|EOY19811.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            3 [Theobroma cacao]
          Length = 1675

 Score =  947 bits (2448), Expect = 0.0
 Identities = 468/711 (65%), Positives = 575/711 (80%), Gaps = 2/711 (0%)
 Frame = -1

Query: 2129 SHLGELKRLLSIICLKCLRMK-KGQIRKNGEKDKSSACTHCLDMPPITVRESNLKDGSFC 1953
            SH+ ELKRLLS++CLKCLRMK K QI+     D+  A   C + P ++++E    DG+  
Sbjct: 85   SHISELKRLLSLLCLKCLRMKNKFQIKSGSISDRLLASC-CENAPQVSIKEVKTTDGACS 143

Query: 1952 LELKVPKSKLRESMWNFLERYGFIYG-YEECRTLLPCEVLEILKRIPAETKKKLAAKGYF 1776
            LELK P  + R S W FLE+YGF YG +   RTLLPCEV+EILKRIPAET++KL+ KG+F
Sbjct: 144  LELKQPSRQARTS-WEFLEKYGFRYGDHHNTRTLLPCEVMEILKRIPAETRRKLSGKGFF 202

Query: 1775 PQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNFES 1596
            PQ+GYIL+ LPVPPNCLSVPDISDG +IMSSD+S +MLKKVLKQ EIIKSSRSG PNFES
Sbjct: 203  PQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLSTAMLKKVLKQVEIIKSSRSGTPNFES 262

Query: 1595 HEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKGSG 1416
            HEVEAN+LQSA+ QYL VRG+ K  R I +++G++ ++ D+S KAW+EKM+TLFI KGSG
Sbjct: 263  HEVEANDLQSAVEQYLQVRGTVKASRNIDARYGISKDASDSSTKAWLEKMRTLFIRKGSG 322

Query: 1415 FSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGGSM 1236
            FSSR VITGD YK+V+EIG+PSEIAQ+ITFEE+V +HNM +LQ LVD KLCLTYRDG S 
Sbjct: 323  FSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVNMHNMRYLQNLVDNKLCLTYRDGSST 382

Query: 1235 YSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKINPL 1056
            YSL+EGSKGHT L+ GQVVHRRIMDGDIVFINRPP+THKHSLQA SVY+HD+HTVKINPL
Sbjct: 383  YSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPL 442

Query: 1055 ICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSLKI 876
            IC PL ADFDGDCIHLFYPQSLAAKAEV ELFSVE+QLLSSH+G LNLQLA D+LLSL++
Sbjct: 443  ICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVEKQLLSSHNGNLNLQLATDSLLSLRV 502

Query: 875  MFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQWTALQILQNALPADFDCSGERYV 696
            M K    KKA AQQL+M++SS L  PA LK     P WTALQILQ A PA  DCSG+RY+
Sbjct: 503  MLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFGPCWTALQILQTAFPACLDCSGDRYL 562

Query: 695  IRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYSVSL 516
            I +S+I+  D++RD++QS+ N+++ ++F +KG ++ L  F+SLQPLLMEN+F+EG+SVSL
Sbjct: 563  ISKSDILTVDFSRDLMQSVINEVVTSIFFEKGPKEVLNFFDSLQPLLMENVFAEGFSVSL 622

Query: 515  EDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKSSTL 336
            EDF + + + + +QK++Q ISPLLY LRSTYNE+V LQ+ENH+R  K PV NFIL SS L
Sbjct: 623  EDFSVSREVIQNIQKDIQDISPLLYQLRSTYNELVGLQMENHIRVAKAPVANFILNSSAL 682

Query: 335  GNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCPSEA 156
            G+LIDSKS+S++NKVV           ++G+ Y++TLVED+   FQ  +   G+D PS  
Sbjct: 683  GDLIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSKTLVEDVAYQFQSIYPSDGVDYPSAE 742

Query: 155  FGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
            FGLI+SCFFHGL+PYE +V SIS+REV+VRSSRGL+EPGTLFKNLMAILRD
Sbjct: 743  FGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLSEPGTLFKNLMAILRD 793


>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|590569189|ref|XP_007011000.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score =  947 bits (2448), Expect = 0.0
 Identities = 468/711 (65%), Positives = 575/711 (80%), Gaps = 2/711 (0%)
 Frame = -1

Query: 2129 SHLGELKRLLSIICLKCLRMK-KGQIRKNGEKDKSSACTHCLDMPPITVRESNLKDGSFC 1953
            SH+ ELKRLLS++CLKCLRMK K QI+     D+  A   C + P ++++E    DG+  
Sbjct: 85   SHISELKRLLSLLCLKCLRMKNKFQIKSGSISDRLLASC-CENAPQVSIKEVKTTDGACS 143

Query: 1952 LELKVPKSKLRESMWNFLERYGFIYG-YEECRTLLPCEVLEILKRIPAETKKKLAAKGYF 1776
            LELK P  + R S W FLE+YGF YG +   RTLLPCEV+EILKRIPAET++KL+ KG+F
Sbjct: 144  LELKQPSRQARTS-WEFLEKYGFRYGDHHNTRTLLPCEVMEILKRIPAETRRKLSGKGFF 202

Query: 1775 PQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNFES 1596
            PQ+GYIL+ LPVPPNCLSVPDISDG +IMSSD+S +MLKKVLKQ EIIKSSRSG PNFES
Sbjct: 203  PQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLSTAMLKKVLKQVEIIKSSRSGTPNFES 262

Query: 1595 HEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKGSG 1416
            HEVEAN+LQSA+ QYL VRG+ K  R I +++G++ ++ D+S KAW+EKM+TLFI KGSG
Sbjct: 263  HEVEANDLQSAVEQYLQVRGTVKASRNIDARYGISKDASDSSTKAWLEKMRTLFIRKGSG 322

Query: 1415 FSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGGSM 1236
            FSSR VITGD YK+V+EIG+PSEIAQ+ITFEE+V +HNM +LQ LVD KLCLTYRDG S 
Sbjct: 323  FSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVNMHNMRYLQNLVDNKLCLTYRDGSST 382

Query: 1235 YSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKINPL 1056
            YSL+EGSKGHT L+ GQVVHRRIMDGDIVFINRPP+THKHSLQA SVY+HD+HTVKINPL
Sbjct: 383  YSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPL 442

Query: 1055 ICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSLKI 876
            IC PL ADFDGDCIHLFYPQSLAAKAEV ELFSVE+QLLSSH+G LNLQLA D+LLSL++
Sbjct: 443  ICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVEKQLLSSHNGNLNLQLATDSLLSLRV 502

Query: 875  MFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQWTALQILQNALPADFDCSGERYV 696
            M K    KKA AQQL+M++SS L  PA LK     P WTALQILQ A PA  DCSG+RY+
Sbjct: 503  MLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFGPCWTALQILQTAFPACLDCSGDRYL 562

Query: 695  IRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYSVSL 516
            I +S+I+  D++RD++QS+ N+++ ++F +KG ++ L  F+SLQPLLMEN+F+EG+SVSL
Sbjct: 563  ISKSDILTVDFSRDLMQSVINEVVTSIFFEKGPKEVLNFFDSLQPLLMENVFAEGFSVSL 622

Query: 515  EDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKSSTL 336
            EDF + + + + +QK++Q ISPLLY LRSTYNE+V LQ+ENH+R  K PV NFIL SS L
Sbjct: 623  EDFSVSREVIQNIQKDIQDISPLLYQLRSTYNELVGLQMENHIRVAKAPVANFILNSSAL 682

Query: 335  GNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCPSEA 156
            G+LIDSKS+S++NKVV           ++G+ Y++TLVED+   FQ  +   G+D PS  
Sbjct: 683  GDLIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSKTLVEDVAYQFQSIYPSDGVDYPSAE 742

Query: 155  FGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
            FGLI+SCFFHGL+PYE +V SIS+REV+VRSSRGL+EPGTLFKNLMAILRD
Sbjct: 743  FGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLSEPGTLFKNLMAILRD 793


>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 991

 Score =  944 bits (2441), Expect = 0.0
 Identities = 471/711 (66%), Positives = 580/711 (81%), Gaps = 2/711 (0%)
 Frame = -1

Query: 2129 SHLGELKRLLSIICLKCLRMKKGQIRKNGEKDKSSACTHCLDMPPITVRESNLKDGSFCL 1950
            SH+ ELKR+LS++CLKCL++K  +I+ +G  ++  +C  C +   I+++E    DG++ L
Sbjct: 87   SHVSELKRMLSLLCLKCLKLKTNKIKSSGVAERLFSC--CEEAAQISIKEVKTTDGAYIL 144

Query: 1949 ELKVP-KSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRIPAETKKKLAAKGYFP 1773
            +LK+P + +LR+  WNFLERYGF YG +  RTLLPCEVLE+L+RIP +T+KKLA KGYFP
Sbjct: 145  QLKLPSRMRLRDGFWNFLERYGFRYGDDITRTLLPCEVLEMLRRIPQDTRKKLAKKGYFP 204

Query: 1772 QDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNFESH 1593
            QDGYI++ +PVPPNCLSVPDISDG ++MSSD+S+SMLKKVLKQ EIIKSSRSG PNFESH
Sbjct: 205  QDGYIMRYVPVPPNCLSVPDISDGVSVMSSDLSISMLKKVLKQVEIIKSSRSGEPNFESH 264

Query: 1592 EVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKGSGF 1413
            EVEA +LQSA+ QYL VRG+ K  R +  +FGV+ ES+D+S KAW+EKM+TLFI KGSGF
Sbjct: 265  EVEAVDLQSAVDQYLQVRGTAKSARDVGERFGVHKESNDSSTKAWLEKMRTLFIRKGSGF 324

Query: 1412 SSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGGSMY 1233
            SSRSVITGDAYK V+EIG+PSEIAQ+ITFEE+V  HNM +LQELVD KLCLTYRDG S Y
Sbjct: 325  SSRSVITGDAYKCVNEIGIPSEIAQRITFEERVNAHNMQYLQELVDNKLCLTYRDGSSTY 384

Query: 1232 SLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKINPLI 1053
            SL+EGSKGHT L++GQ+VHRRIMDGD+VFINRPP+THKHSLQA SVY+HD HTVKINPLI
Sbjct: 385  SLREGSKGHTFLRLGQIVHRRIMDGDMVFINRPPTTHKHSLQALSVYVHDGHTVKINPLI 444

Query: 1052 CSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSLKIM 873
            C PL ADFDGDCIHLFYPQSLAAKAEVLELFSVE+QLLSSHSG LNLQL +D+LLSLK M
Sbjct: 445  CGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLTSDSLLSLKTM 504

Query: 872  FKKYFLKKATAQQLAMYV-SSGLQFPALLKACGPVPQWTALQILQNALPADFDCSGERYV 696
            F  YFL +A AQQLAM+V SS L  PAL KA   VP WTALQILQ ALP+ FDCSGERY+
Sbjct: 505  FNTYFLDRAAAQQLAMFVSSSSLPQPALWKAHCSVPIWTALQILQTALPSQFDCSGERYL 564

Query: 695  IRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYSVSL 516
            I  ++IVK D++RDVVQ++ NDI+ ++F +KG     K FNSLQPLLME++FSEG+SV L
Sbjct: 565  ISNTDIVKVDFSRDVVQAVINDIVISMFFEKGPDAVFKFFNSLQPLLMESLFSEGFSVGL 624

Query: 515  EDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKSSTL 336
            EDF I ++     +++ + IS LL  LRSTYNE++ LQ+ENH+R  K+PV +FI++ S++
Sbjct: 625  EDFYISRAAIGGTRRDFKVISSLLSQLRSTYNELMALQLENHIRRAKLPVADFIVRLSSI 684

Query: 335  GNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCPSEA 156
            G+LID KS+S++ KVV           DRG+ YT+TLVEDM   F+ K+  S ID PS  
Sbjct: 685  GDLIDYKSDSAMTKVVQQIGFLGLQISDRGKFYTKTLVEDMALHFESKYP-SDIDYPSAK 743

Query: 155  FGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
             GLI+SCFFHGL+PYE++V SIS+REV+VRS+RGL+EPGTLFKNLMAILRD
Sbjct: 744  HGLIQSCFFHGLDPYEEMVHSISAREVMVRSTRGLSEPGTLFKNLMAILRD 794


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  936 bits (2420), Expect = 0.0
 Identities = 468/692 (67%), Positives = 562/692 (81%), Gaps = 1/692 (0%)
 Frame = -1

Query: 2075 RMKKGQIRKNGEKDKSSACTHCLDMPPITVRESNLKDGSFCLELKVP-KSKLRESMWNFL 1899
            R++  ++  NG  ++  A   C D P ++VRE    +G+  LELK+P +S+ ++  W+FL
Sbjct: 162  RIQTDKVTNNGITEQLLAPC-CQDSPQVSVREFRPTEGACFLELKIPSRSRPKDGFWDFL 220

Query: 1898 ERYGFIYGYEECRTLLPCEVLEILKRIPAETKKKLAAKGYFPQDGYILQKLPVPPNCLSV 1719
             RYG+ YG+   R LLP EV+EIL+RIP +T+KKL  KGYFPQDGYILQ LPVPPNCLSV
Sbjct: 221  ARYGYRYGHNLSRILLPSEVMEILRRIPEDTRKKLVRKGYFPQDGYILQYLPVPPNCLSV 280

Query: 1718 PDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNFESHEVEANELQSAIAQYLHVR 1539
            PDISDG +IMSSD+SVSMLKKVLKQ E+IK SRSG PNFESH++EAN LQS+I QYL VR
Sbjct: 281  PDISDGVSIMSSDLSVSMLKKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVR 340

Query: 1538 GSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKGSGFSSRSVITGDAYKRVDEIG 1359
            G+ K  R + ++FG + E +++S KAW+EKM+TLFI KGSGFSSRSVITGDAYKRV+EIG
Sbjct: 341  GTAKTSRSLDTRFGSSKEPNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIG 400

Query: 1358 LPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGGSMYSLKEGSKGHTSLKVGQVV 1179
            LP EIAQ+ITFEE+V VHNM HLQ LVD+KLCLTYRDG S YSL+EGSKGHT L+ GQVV
Sbjct: 401  LPFEIAQRITFEERVNVHNMKHLQNLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVV 460

Query: 1178 HRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKINPLICSPLGADFDGDCIHLFYP 999
            HRRIMDGDIVFINRPP+THKHSLQA SVY+HD+HTVKINPLIC PL ADFDGDC+HLFYP
Sbjct: 461  HRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYP 520

Query: 998  QSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSLKIMFKKYFLKKATAQQLAMYV 819
            QSL AKAEVLELFSVE+QLLSSHSG LNLQLA D+LLSLK++F++YFL KA AQQL M+V
Sbjct: 521  QSLGAKAEVLELFSVEKQLLSSHSGNLNLQLATDSLLSLKVLFERYFLNKAAAQQLVMFV 580

Query: 818  SSGLQFPALLKACGPVPQWTALQILQNALPADFDCSGERYVIRQSEIVKFDYNRDVVQSI 639
            S  L  PALLK+    P WTALQILQ ALP+ FDC GER+ I +S I+K DYNRDV+QS+
Sbjct: 581  SMSLPRPALLKSPCSGPCWTALQILQTALPSYFDCIGERHWISKSAILKVDYNRDVLQSL 640

Query: 638  FNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYSVSLEDFCIPKSITRELQKNVQK 459
             N+I+ ++F +KG  + LK F+SLQPLLMEN+FSEG+SVSLEDF IP  +T+ +QKNV+ 
Sbjct: 641  VNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLEDFSIPSEVTQNIQKNVED 700

Query: 458  ISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKSSTLGNLIDSKSESSINKVVXXX 279
            IS LLY+LRS YNE+++LQ ENHLR  KVPV NFIL SS LGNLIDSKS+S+INKVV   
Sbjct: 701  ISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFILNSSALGNLIDSKSDSAINKVVQQI 760

Query: 278  XXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCPSEAFGLIRSCFFHGLNPYEKLV 99
                    ++G+ Y+RTLVE M   F+ K+   G D PS  FGLIRSCFFHGL+PYE++V
Sbjct: 761  GFLGQQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMV 820

Query: 98   DSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
             SIS+RE++VRSSRGL+EPGTLFKNLMAILRD
Sbjct: 821  HSISTREIIVRSSRGLSEPGTLFKNLMAILRD 852


>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
            gi|462415343|gb|EMJ20080.1| hypothetical protein
            PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score =  936 bits (2419), Expect = 0.0
 Identities = 470/711 (66%), Positives = 568/711 (79%), Gaps = 2/711 (0%)
 Frame = -1

Query: 2129 SHLGELKRLLSIICLKCLRMKKGQI-RKNGEKDKSSACTHCLDMPPITVRESNLKDGSFC 1953
            +H+ ELKR+LS++CLKCL+MKK +   KN    +    + C D   +++ E    DGS  
Sbjct: 85   NHVSELKRMLSLLCLKCLKMKKNKFPTKNAGLAERMLSSCCEDASQVSIGEIKPTDGSCS 144

Query: 1952 LELKVP-KSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRIPAETKKKLAAKGYF 1776
            L+LK P KS+     WNFLERYGF YG    RTLLPCEV+E+LKRIP ET+KKLAAKGYF
Sbjct: 145  LQLKRPSKSRTPPGFWNFLERYGFRYGDGHIRTLLPCEVMEMLKRIPQETRKKLAAKGYF 204

Query: 1775 PQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNFES 1596
            PQDGYIL ++PVPPNCLSVP+ISDG ++MS+D S+SMLKKVLKQ EII+SSRSG PNFES
Sbjct: 205  PQDGYILSQIPVPPNCLSVPEISDGVSVMSADPSISMLKKVLKQVEIIRSSRSGIPNFES 264

Query: 1595 HEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKGSG 1416
              VEANELQ+ I QYL VRG+ K  R I ++FGVN E + +S KAW+EKM+TLFI KGSG
Sbjct: 265  QIVEANELQAIIDQYLQVRGTGKPSRDIDARFGVNKELNASSTKAWLEKMRTLFIRKGSG 324

Query: 1415 FSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGGSM 1236
            FSSRSVITGDA++RV+E+G+P EIAQ+ITFEEKV  HN+ +LQELVD KLCLTY+DG S 
Sbjct: 325  FSSRSVITGDAFRRVNEVGIPYEIAQRITFEEKVNDHNIRYLQELVDSKLCLTYKDGSST 384

Query: 1235 YSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKINPL 1056
            YSL+EGSKGHT L+ GQVVHRRIMDGD+VF+NRPP+THKHSLQA  VY+HD+H VKINPL
Sbjct: 385  YSLREGSKGHTFLRPGQVVHRRIMDGDLVFVNRPPTTHKHSLQALQVYVHDDHVVKINPL 444

Query: 1055 ICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSLKI 876
            IC PL ADFDGDCIHLFYPQSLAAKAEVLELFSVE+QLLSSHSGK NLQLA DALLSLK+
Sbjct: 445  ICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQLLSSHSGKPNLQLAADALLSLKM 504

Query: 875  MFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQWTALQILQNALPADFDCSGERYV 696
            MFKKYFL KA AQQLAM+ SS L  PALLKA      WTA QILQ ALPA FDCSG+ Y+
Sbjct: 505  MFKKYFLDKAAAQQLAMFASSSLPRPALLKANSAHSYWTAFQILQTALPAHFDCSGDNYL 564

Query: 695  IRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYSVSL 516
            + +SEI+  D++   V ++ NDI  +VF +KG +D LK F+SLQPLLMEN+FSEG+SV L
Sbjct: 565  VNKSEILNIDFSTSSVAAVMNDIATSVFFEKGGEDVLKFFDSLQPLLMENLFSEGFSVGL 624

Query: 515  EDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKSSTL 336
            EDF + ++  +++QKN+Q  S LLYHLRSTYNE VE Q++N +R VKVPV +FIL+SS L
Sbjct: 625  EDFYMSRTSIQDIQKNIQDSSDLLYHLRSTYNEFVEFQLQNRIRSVKVPVSHFILESSAL 684

Query: 335  GNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCPSEA 156
            G+LIDSKS+S+INK+V           D+GR Y++TLVED+ +    K+  S ID PS  
Sbjct: 685  GDLIDSKSDSAINKIVQQIGFLGLQLSDKGRFYSKTLVEDVASLCHSKYP-SDIDYPSAE 743

Query: 155  FGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
            +GL++SCFFHGL+PYE +V SI++REV+VRSSRGL+EPGTLFKNLMAILRD
Sbjct: 744  YGLVQSCFFHGLDPYEAIVHSIATREVIVRSSRGLSEPGTLFKNLMAILRD 794


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
            gi|550343552|gb|EEE78905.2| hypothetical protein
            POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score =  926 bits (2392), Expect = 0.0
 Identities = 463/714 (64%), Positives = 575/714 (80%), Gaps = 5/714 (0%)
 Frame = -1

Query: 2129 SHLGELKRLLSIICLKCLRMKKG--QIRKNGEKDKSSACTHCL--DMPPITVRESNLKDG 1962
            SH+ ELKR+LS+ICLKCL++K+   QI+ NG  ++  +C      +   I++RE    DG
Sbjct: 85   SHISELKRMLSLICLKCLKLKRNKIQIKSNGVAERLLSCCEVSIKECAQISIREVKNTDG 144

Query: 1961 SFCLELKVP-KSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRIPAETKKKLAAK 1785
            +  LELK+P +S+LR+  WNFLERYGF YG +  R LLPCEV++ILKRIPAET+KKL+ K
Sbjct: 145  ACFLELKLPSRSRLRDGCWNFLERYGFRYGDDFTRPLLPCEVMQILKRIPAETRKKLSGK 204

Query: 1784 GYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPN 1605
            GYFPQDGYILQ+LPVPPNCLSVP +SDG T+MSSD+S+SMLKKVLKQAE+I+SSRSG PN
Sbjct: 205  GYFPQDGYILQQLPVPPNCLSVPVVSDGITVMSSDLSISMLKKVLKQAEVIRSSRSGAPN 264

Query: 1604 FESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISK 1425
            F++H+ EA  LQS + QYL VRG+TK  R + +++GV  ES +++ KAW+EKM+TLFI K
Sbjct: 265  FDAHKDEATSLQSMVDQYLQVRGTTKTSRDVDTRYGVKKESSESTTKAWLEKMRTLFIRK 324

Query: 1424 GSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDG 1245
            GSGFSSRSVITGDAY  V+++G+P EIAQ+ITFEE+V+VHNM +LQELVD KLCLTY+DG
Sbjct: 325  GSGFSSRSVITGDAYTLVNQVGIPYEIAQRITFEERVSVHNMRYLQELVDNKLCLTYKDG 384

Query: 1244 GSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKI 1065
             S YSL+EGSKGHT L+ GQVVHRRIMDGDIVFINRPP+THKHSLQA SVY+HD+H VKI
Sbjct: 385  SSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHAVKI 444

Query: 1064 NPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLS 885
            NPLIC PL ADFDGDC+HLFYPQSLAAKAEVLELFSVE+QLLSSHSG LNLQL  D+LLS
Sbjct: 445  NPLICGPLSADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLTTDSLLS 504

Query: 884  LKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQWTALQILQNALPADFDCSGE 705
            LK+MFK  FL K+ AQQLAM++S  L  PALLK     P WTA QILQ ALPA F+CSGE
Sbjct: 505  LKMMFKACFLGKSAAQQLAMFISPYLPQPALLKVNCFFPHWTAHQILQMALPACFNCSGE 564

Query: 704  RYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYS 525
            R++I  S  +K D+NRDVV S+ N+I+ ++F +KGS   LK FNSLQP+LMEN+FSEG+S
Sbjct: 565  RFLIINSNFLKVDFNRDVVASVINEILISMFFEKGSGAVLKFFNSLQPMLMENLFSEGFS 624

Query: 524  VSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKS 345
            VSLEDF I +++ + + ++ + ISPLL +LRST+NE+VELQVENH+R VK PV  FIL S
Sbjct: 625  VSLEDFSISRAVKQRIPESFKAISPLLCNLRSTFNELVELQVENHIRDVKQPVREFILTS 684

Query: 344  STLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCP 165
            S LG LIDSKS++++ KVV           DRG++Y++TLVED+ + F  K+  +  D P
Sbjct: 685  SALGYLIDSKSDAAVTKVVQQIGFLGLQVSDRGKLYSKTLVEDLASHFLSKYPANLFDYP 744

Query: 164  SEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
            S  +GLI++ FFHGL+ YE++  SIS+REV+VRSSRGL+EPGTLFKNLMAILRD
Sbjct: 745  SAQYGLIQNSFFHGLDAYEEMAHSISTREVIVRSSRGLSEPGTLFKNLMAILRD 798


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
            gi|557522591|gb|ESR33958.1| hypothetical protein
            CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score =  915 bits (2364), Expect = 0.0
 Identities = 460/713 (64%), Positives = 573/713 (80%), Gaps = 4/713 (0%)
 Frame = -1

Query: 2129 SHLGELKRLLSIICLKCLRMK--KGQIRKNGEKDKS-SACTHCLDMPPITVRESNLKDGS 1959
            SH+ ELKR+LS++CLKCL+MK  K QI+ +G   +  S+C  C +   +++ +    DG+
Sbjct: 85   SHISELKRMLSLLCLKCLKMKSTKLQIKNDGVAQRLLSSC--CEEASQVSIVDVKTTDGA 142

Query: 1958 FCLELKVP-KSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRIPAETKKKLAAKG 1782
            F LELK+P K +L    WNFLERYGF YG    RTLL  EV E+LKRIP ET+KKLA KG
Sbjct: 143  FYLELKLPSKFRLCAGFWNFLERYGFRYGDSLTRTLLASEVKEMLKRIPEETRKKLAGKG 202

Query: 1781 YFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNF 1602
            YFPQDGYIL+ LPVPPNCLSVPDISDG + MSSD+S++MLKKVLKQ EII+SSRSG PNF
Sbjct: 203  YFPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDLSIAMLKKVLKQVEIIRSSRSGTPNF 262

Query: 1601 ESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKG 1422
            ES EVE+N+LQ A+ QYL VRG+ K  R + ++FGV+ + + T+ KAW+EKM+TLFI KG
Sbjct: 263  ESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARFGVSQDPNSTT-KAWLEKMRTLFIRKG 321

Query: 1421 SGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGG 1242
            SGFSSRSVITGDAYKRV+EIG+P EIAQ+ITFEE+V VHN+N+LQELVD KLCLTY DG 
Sbjct: 322  SGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEERVNVHNINYLQELVDNKLCLTYSDGS 381

Query: 1241 SMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKIN 1062
            S YSL+EGSKGHT L+ GQVVHRRIMDGD VFINRPP+THKHSLQA SVY+HD+HTVKIN
Sbjct: 382  SSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRPPTTHKHSLQALSVYVHDDHTVKIN 441

Query: 1061 PLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSL 882
            PLIC PL ADFDGDCIHLFYPQSLAAKAEVLELFSVE+QLLSSH+G LNLQLA DALLSL
Sbjct: 442  PLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQLLSSHNGNLNLQLATDALLSL 501

Query: 881  KIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQWTALQILQNALPADFDCSGER 702
            K+MFKKYFL KA AQQLAM+  S L  PAL KA    P+WTALQILQ+ LP  FD  G+R
Sbjct: 502  KVMFKKYFLDKAFAQQLAMFALSPLPRPALSKAHCSGPRWTALQILQSVLPPGFDSCGDR 561

Query: 701  YVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYSV 522
            Y+I++SE++  D++RD + S+ N+I+ ++F +KG ++ L+ F+SLQPLLMEN+F++G+SV
Sbjct: 562  YLIKKSEVLNGDFDRDTIPSVINEIVTSIFFEKGPEEVLEFFDSLQPLLMENLFADGFSV 621

Query: 521  SLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKSS 342
            SLEDF + K+    +QK +Q +  LLYH  ST NE+V+LQ+ENH+R VK+ V  FILKSS
Sbjct: 622  SLEDFSLSKAALWNIQKEIQALYSLLYHRMSTQNELVDLQIENHIRHVKMLVAKFILKSS 681

Query: 341  TLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCPS 162
            TLG LIDSKS+S+++KVV           DRG+ Y++TLVED+ + F++ + +  ++ P+
Sbjct: 682  TLGYLIDSKSDSAVSKVVQQAGFLGLQLSDRGKFYSKTLVEDIASHFERIYPMD-LNYPT 740

Query: 161  EAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
              +GLI+ CFFHGL+PYE++  SIS+REV+VRSSRGL+EPGTLFKNLMA+LRD
Sbjct: 741  AKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGLSEPGTLFKNLMAVLRD 793


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
            sinensis]
          Length = 1865

 Score =  908 bits (2347), Expect = 0.0
 Identities = 459/714 (64%), Positives = 572/714 (80%), Gaps = 5/714 (0%)
 Frame = -1

Query: 2129 SHLGELKRLLSIICLKCLRMK--KGQIRKNGEKDKS-SACTHCLDMPPITVRESNLKDGS 1959
            SH+ ELK +LS++CLKCL+MK  K QI+ +G   +  S+C  C +   +++ +    DG+
Sbjct: 85   SHISELKHMLSLLCLKCLKMKSTKFQIKNDGVAQRLLSSC--CEEASQVSIVDVKTTDGA 142

Query: 1958 FCLELKVP-KSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRIPAETKKKLAAKG 1782
            F LELK+P K +L    WNFLERYGF YG    RTLL  EV E+LKRIP ET+KKLA KG
Sbjct: 143  FYLELKLPSKFRLCAGFWNFLERYGFRYGDSLTRTLLASEVKEMLKRIPEETRKKLAGKG 202

Query: 1781 YFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNF 1602
            YFPQDGYIL+ LPVPPNCLSVPDISDG + MSSD+S++MLKKVLKQ EII+SSRSG PNF
Sbjct: 203  YFPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDLSIAMLKKVLKQVEIIRSSRSGTPNF 262

Query: 1601 ESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKG 1422
            ES EVE+N+LQ A+ QYL VRG+ K  R + ++FGV+ + + T+ KAW+EKM+TLFI KG
Sbjct: 263  ESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARFGVSQDPNSTT-KAWLEKMRTLFIRKG 321

Query: 1421 SGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGG 1242
            SGFSSRSVITGDAYKRV+EIG+P EIAQ+ITFEE+V VHN+N+LQELVD KLCLTY DG 
Sbjct: 322  SGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEERVNVHNINYLQELVDNKLCLTYSDGS 381

Query: 1241 SMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKIN 1062
            S YSL+EGSKGHT L+ GQVVHRRIMDGD VFINRPP+THKHSLQA SVY+HD+HTVKIN
Sbjct: 382  SSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRPPTTHKHSLQALSVYVHDDHTVKIN 441

Query: 1061 PLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSL 882
            PLIC PL ADFDGDCIHLFYPQSLAAKAEVLELFSVE+QLLSSH+G LNLQLA DALLSL
Sbjct: 442  PLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQLLSSHNGNLNLQLATDALLSL 501

Query: 881  KIMFKKYFLKKATAQQLAMYVSSGLQFPALLKA-CGPVPQWTALQILQNALPADFDCSGE 705
            K+MFKKYFL KA  QQLAM+  S L  PAL KA C    +WTALQILQ+ LP  FD  G+
Sbjct: 502  KVMFKKYFLDKAFTQQLAMFALSPLPRPALSKARCS--ARWTALQILQSVLPPGFDSCGD 559

Query: 704  RYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYS 525
            RY+I++SE++K D++RD + S+ N+I+ ++F +KG ++ L+ F+SLQPLLMEN+F++G+S
Sbjct: 560  RYLIKKSEVLKGDFDRDTIPSVINEIVTSIFFEKGPEEVLEFFDSLQPLLMENLFADGFS 619

Query: 524  VSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKS 345
            VSLEDF + K+    +QK +Q +  LLYH  ST NE+V+LQ+ENH+R VK+ V  FILKS
Sbjct: 620  VSLEDFSLSKAALWNIQKEIQALYSLLYHRMSTQNELVDLQIENHIRHVKMLVAKFILKS 679

Query: 344  STLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCP 165
            STLG LIDSKS+S+++KVV           DRG+ Y++TLVED+ + F++ + +  ++ P
Sbjct: 680  STLGYLIDSKSDSAVSKVVQQAGFLGLQLSDRGKFYSKTLVEDIASHFERIYPMD-LNYP 738

Query: 164  SEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
            +  +GLI+ CFFHGL+PYE++  SIS+REV+VRSSRGL+EPGTLFKNLMA+LRD
Sbjct: 739  TAKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGLSEPGTLFKNLMAVLRD 792


>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
          Length = 2054

 Score =  905 bits (2339), Expect = 0.0
 Identities = 468/716 (65%), Positives = 560/716 (78%), Gaps = 7/716 (0%)
 Frame = -1

Query: 2129 SHLGELKRLLSIICLKCLRMKKGQIR-KNGEKDKSSACTHCLDMPPITVRESNLKDGSFC 1953
            SH+ ELKR+LS++CLKCL+MKK +   KN    +    + C D   +++ E   KD    
Sbjct: 85   SHVSELKRMLSLLCLKCLKMKKNKFPVKNAGIAEQLLASCCQDASQVSIEEVK-KDTYSH 143

Query: 1952 LELKVPKSK-LRESMWNFLERYGFIYGY---EEC--RTLLPCEVLEILKRIPAETKKKLA 1791
            L LKVP +K L E  WNFLERYGF YG    EE   RTLLPCEV+EI K+IP ET+KKL 
Sbjct: 144  LRLKVPSNKKLHEGFWNFLERYGFRYGGSPGEELLRRTLLPCEVMEIFKKIPEETRKKLV 203

Query: 1790 AKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGP 1611
             KGYFPQDGYILQ LPVPPNCLSVP+ISDG TIMS+D S SMLKKVL+Q EIIKSSRS  
Sbjct: 204  GKGYFPQDGYILQYLPVPPNCLSVPEISDGITIMSTDPSTSMLKKVLRQGEIIKSSRS-Q 262

Query: 1610 PNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFI 1431
            PNFES EVEANELQS + QYL VRGS K  R I ++FGVN E  ++S K W+EKM+TLFI
Sbjct: 263  PNFESLEVEANELQSIVNQYLQVRGSVKASRDIDARFGVNKEEKNSSRKVWLEKMRTLFI 322

Query: 1430 SKGSGFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYR 1251
             KGSGFSSRSVITGDAYK V+E+G+P EIA+ ITFEEKV+ HNM +LQELVD KLCLTY+
Sbjct: 323  RKGSGFSSRSVITGDAYKAVNEVGIPYEIARWITFEEKVSSHNMKYLQELVDNKLCLTYK 382

Query: 1250 DGGSMYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTV 1071
            DG S YSL+EGSKGHT LK+GQVVHRRIMDGDIVFINRPP+THKHSLQA  VY+H+++TV
Sbjct: 383  DGSSTYSLREGSKGHTFLKLGQVVHRRIMDGDIVFINRPPTTHKHSLQALRVYVHEDNTV 442

Query: 1070 KINPLICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDAL 891
            KINPLIC PL ADFDGDC+HLFYPQS AAKAEVLELFS+E+Q+LSSHSG + LQLA D+L
Sbjct: 443  KINPLICGPLSADFDGDCVHLFYPQSPAAKAEVLELFSLEKQILSSHSGGMILQLACDSL 502

Query: 890  LSLKIMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQWTALQILQNALPADFDCS 711
            LSLKIMFK YF+ K  AQQL M+ SS L  PA        P WTALQ+LQ ALP   DC 
Sbjct: 503  LSLKIMFKTYFMDKIAAQQLVMFASSSLPQPAFWLTHSGDPFWTALQVLQTALPTSLDCY 562

Query: 710  GERYVIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEG 531
            G+R++I+ S+I+  D+NRDV  S+ NDI  ++  +KGS++ LK FN+LQPLLMENIF++G
Sbjct: 563  GDRFLIKGSDILVLDFNRDV--SVINDIGASICSEKGSEEVLKFFNALQPLLMENIFAQG 620

Query: 530  YSVSLEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFIL 351
            +SV LEDF I + + + + K++Q ISPLLYHLRSTYNE+VELQ+EN +R  K PV NFIL
Sbjct: 621  FSVGLEDFSISQEVIKNITKDIQLISPLLYHLRSTYNELVELQLENQIRFAKAPVTNFIL 680

Query: 350  KSSTLGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGID 171
            KSS++GNLID KS+S+INKVV           DRG+ Y++TLVED++  + +K+    +D
Sbjct: 681  KSSSMGNLIDPKSDSAINKVVQQIGFLGLQISDRGKFYSKTLVEDVSCLYTRKYP-ENVD 739

Query: 170  CPSEAFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
             PS   GLIRSCFFHGL+PYE++V SIS+REV+VRSSRGLTEPGTLFKNLMAILRD
Sbjct: 740  YPSAEHGLIRSCFFHGLDPYEEIVHSISTREVIVRSSRGLTEPGTLFKNLMAILRD 795


>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1 [Solanum lycopersicum]
          Length = 1632

 Score =  892 bits (2305), Expect = 0.0
 Identities = 444/709 (62%), Positives = 554/709 (78%), Gaps = 1/709 (0%)
 Frame = -1

Query: 2126 HLGELKRLLSIICLKCLRMKKGQIRKNGEKDKS-SACTHCLDMPPITVRESNLKDGSFCL 1950
            H+ ELK++LS++CLKCL+MK  +++  G  ++  S+C  C D+  ++V E    DG+  L
Sbjct: 87   HVSELKKMLSLLCLKCLKMKNRKVKNAGVLERMLSSC--CEDVSQVSVYEGKTSDGASYL 144

Query: 1949 ELKVPKSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRIPAETKKKLAAKGYFPQ 1770
            ELKVPK+  +   WNFLE+YG+ YG    R LLP EVL IL+RI  +T+KKL+AKGYFPQ
Sbjct: 145  ELKVPKNAAKLQEWNFLEKYGYRYGDGYSRPLLPSEVLAILRRIREDTRKKLSAKGYFPQ 204

Query: 1769 DGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNFESHE 1590
            +GYILQ LPVPPNCLSVPDISDG  IMSSD S++ML+KVL+Q +IIKSSRSG PNFE+HE
Sbjct: 205  EGYILQYLPVPPNCLSVPDISDGNNIMSSDHSITMLRKVLRQIDIIKSSRSGTPNFEAHE 264

Query: 1589 VEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKGSGFS 1410
            VEAN+LQ+A+ QYL  RG+ K  R +  +FG++ E+ DT+ KAW+EKMKTLFI KGSGFS
Sbjct: 265  VEANDLQAAVVQYLQFRGTGKASRDVDKRFGIHKEAADTTTKAWLEKMKTLFIRKGSGFS 324

Query: 1409 SRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGGSMYS 1230
            SRSVITGD YK V EIGLP EIAQKITFEE+V+ HNM +LQ+LVD+KLCLTY+DG S YS
Sbjct: 325  SRSVITGDPYKGVGEIGLPCEIAQKITFEERVSQHNMAYLQKLVDEKLCLTYKDGSSTYS 384

Query: 1229 LKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKINPLIC 1050
            L+EGSKGHT L+ GQ+VHRRIMDGD VFINRPP+THKHSLQA SVY+HD+HTVKINPL+C
Sbjct: 385  LREGSKGHTFLRPGQIVHRRIMDGDTVFINRPPTTHKHSLQALSVYVHDDHTVKINPLMC 444

Query: 1049 SPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSLKIMF 870
             PL ADFDGDCIHLFYPQSL+AKAEVLELF+V +QLLSSH+G  NLQLA D+LLSLK+MF
Sbjct: 445  GPLSADFDGDCIHLFYPQSLSAKAEVLELFAVGKQLLSSHTGNFNLQLATDSLLSLKLMF 504

Query: 869  KKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQWTALQILQNALPADFDCSGERYVIR 690
              YF  KA AQQLAM++   L   A++        WT LQIL  ALP  FD  GE + I 
Sbjct: 505  SHYFFDKAAAQQLAMFLPMALPDSAVVDVRKSGAMWTTLQILGAALPDGFDSCGETHTIG 564

Query: 689  QSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYSVSLED 510
            +S+ +  DY+RD++ SI ND+I +++  KG  D LK FNSLQPLLMEN+ +EG+S+SL D
Sbjct: 565  KSQFLGIDYHRDLISSILNDVITSIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSISLRD 624

Query: 509  FCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKSSTLGN 330
            F + K++   +Q+ +Q +S LL+HLRS+YNE VE+Q+E+HLR  K+PV++F+LKSS +G 
Sbjct: 625  FYMTKAVRDGIQERIQCMSKLLHHLRSSYNESVEVQLEHHLRNEKLPVIDFVLKSSGMGV 684

Query: 329  LIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCPSEAFG 150
            LIDSKSES+ NKVV           DRG+ YT+TLV DM   FQKK+   G + PSE FG
Sbjct: 685  LIDSKSESAFNKVVQQIGFLGLQISDRGKFYTKTLVHDMAQLFQKKYPSVGTN-PSEEFG 743

Query: 149  LIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
            L+RSC F+GL+PY+ ++ SISSREV+VRS+RGLTEPGTLFKNLMAILRD
Sbjct: 744  LVRSCLFYGLDPYQGMIHSISSREVIVRSTRGLTEPGTLFKNLMAILRD 792


>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2082

 Score =  883 bits (2282), Expect = 0.0
 Identities = 428/712 (60%), Positives = 561/712 (78%), Gaps = 3/712 (0%)
 Frame = -1

Query: 2129 SHLGELKRLLSIICLKCLRMKKGQIRKNGEKDKSSACTHCLDMPP---ITVRESNLKDGS 1959
            SH+ +LKR+LS++CL CL+++K ++  +         + C        +++RE    DG+
Sbjct: 85   SHISDLKRMLSMVCLNCLKLRKTKLPASSSGLAQRLISPCCQEDKAALVSIREVKTSDGA 144

Query: 1958 FCLELKVPKSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRIPAETKKKLAAKGY 1779
              L LKV KSK++   W+FLE+YG+ YG +  R LLPCE +EI+KRIP ETKKKLA KGY
Sbjct: 145  CYLALKVSKSKMQNGFWSFLEKYGYRYGGDHTRALLPCEAMEIIKRIPIETKKKLAGKGY 204

Query: 1778 FPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNFE 1599
            FPQDGY+L+ LPVPPNCLSVP++SDG ++MSSD S+++L+K+L++ EIIKSSRSG PNFE
Sbjct: 205  FPQDGYVLKYLPVPPNCLSVPEVSDGVSVMSSDPSITILRKLLRKVEIIKSSRSGEPNFE 264

Query: 1598 SHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKGS 1419
            SH VEAN+LQS + QY  +RG++K  R I++ FGVN E   +S KAW+EKM+TLFI KGS
Sbjct: 265  SHHVEANDLQSVVDQYFQIRGTSKPARDIETHFGVNKELTASSTKAWLEKMRTLFIRKGS 324

Query: 1418 GFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGGS 1239
            GFSSR+VITGD YKR++E+G+P E+AQ+ITFEE+V +HN+ +LQ+LVD+ LCLTY++GGS
Sbjct: 325  GFSSRNVITGDCYKRINEVGIPVEVAQRITFEERVNIHNIRYLQKLVDEHLCLTYKEGGS 384

Query: 1238 MYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKINP 1059
             YSL+EGSKGH  LK GQ+VHRRIMDGDIVFINRPP+THKHSLQA  VYIH++HTVKINP
Sbjct: 385  TYSLREGSKGHIYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALYVYIHEDHTVKINP 444

Query: 1058 LICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSLK 879
            LIC PLGADFDGDC+HLFYPQSLAAKAEV+ELFSVE QLLSSHSG LNLQL+ D+LLSLK
Sbjct: 445  LICGPLGADFDGDCVHLFYPQSLAAKAEVVELFSVENQLLSSHSGNLNLQLSTDSLLSLK 504

Query: 878  IMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQWTALQILQNALPADFDCSGERY 699
            ++ K+ F  +A A QLAM++   L  PALLKA      WT++QILQ ALP  FDC+G RY
Sbjct: 505  MLVKRCFFDRAAANQLAMFILLPLPRPALLKASSGDACWTSIQILQCALPLGFDCTGGRY 564

Query: 698  VIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYSVS 519
            +IRQSEI++F+++RDV+ +  N+I  +VF  KG ++AL  F+ LQP LME++F+EG+SVS
Sbjct: 565  LIRQSEILEFEFSRDVLPATVNEIAASVFFGKGPKEALNFFDVLQPFLMESLFAEGFSVS 624

Query: 518  LEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKSST 339
            LE+F I ++I R ++K++ K+S LLY LRS YNE+V  Q+E H+R V++P++NF LKS+ 
Sbjct: 625  LEEFSISRAIKRIIRKSIGKVSSLLYQLRSLYNELVAQQLEKHIRDVELPIINFALKSTK 684

Query: 338  LGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCPSE 159
            LG+LIDSKS+S+I+KVV          FDRGR Y++ LV+D+ + F  K    G   PS 
Sbjct: 685  LGDLIDSKSKSAIDKVVQQIGFLGQQLFDRGRFYSKGLVDDVASHFHAKCCYDGDGYPSA 744

Query: 158  AFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
             +GL++ CFF+GL+PYE++V SIS+RE++VRSSRGL+EPGTLFKNLMAILRD
Sbjct: 745  EYGLLKGCFFNGLDPYEEMVHSISTREIMVRSSRGLSEPGTLFKNLMAILRD 796


>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
            arietinum]
          Length = 2263

 Score =  882 bits (2278), Expect = 0.0
 Identities = 421/712 (59%), Positives = 563/712 (79%), Gaps = 3/712 (0%)
 Frame = -1

Query: 2129 SHLGELKRLLSIICLKCLRMKKGQIRKNGE---KDKSSACTHCLDMPPITVRESNLKDGS 1959
            SH+ ELK++LS++CL CL++KK +   +     +   S C   ++   +++RE    DG+
Sbjct: 85   SHVTELKKILSLVCLNCLKLKKTKFPSSSSGLAQSLLSPCCEDVNAAQVSIREVKTADGA 144

Query: 1958 FCLELKVPKSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRIPAETKKKLAAKGY 1779
              L LKV KSK+ +  W FLE+YG+ YG +  R LLPCEV+EI+KR P ET +KLA KGY
Sbjct: 145  CYLALKVSKSKMHDGFWGFLEKYGYRYGGDHTRALLPCEVMEIIKRFPQETNRKLAIKGY 204

Query: 1778 FPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNFE 1599
            FPQDGY+L+ LPVPPNCLSVP +SDG ++MSSD ++++L+K+L++ EII+SSRSG PNFE
Sbjct: 205  FPQDGYVLKYLPVPPNCLSVPVVSDGVSVMSSDPAMTILRKLLRKVEIIRSSRSGEPNFE 264

Query: 1598 SHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKGS 1419
            SH+VEAN+LQS + QYL VRG++K  R I++++GVN E +D+S KAW+EKM+TLFI KGS
Sbjct: 265  SHQVEANDLQSVVDQYLQVRGTSKATRDIETRYGVNKELNDSSTKAWLEKMRTLFIRKGS 324

Query: 1418 GFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGGS 1239
            GFSSR+VITGD YK+++E+G+P E+AQ+ITFEE+V++HN+ +LQ+LVD+ +CLTY++G S
Sbjct: 325  GFSSRNVITGDGYKKINEVGIPLEVAQRITFEERVSIHNIRYLQKLVDENMCLTYKEGVS 384

Query: 1238 MYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKINP 1059
             YSL+EGSKGHT LK GQ+VHRRIMDGD+VFINRPP+THKHSLQA  VYIHD+HTVKINP
Sbjct: 385  TYSLREGSKGHTYLKPGQIVHRRIMDGDVVFINRPPTTHKHSLQALVVYIHDDHTVKINP 444

Query: 1058 LICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSLK 879
            LIC PLGADFDGDC+HLFYPQSLAAKAEVLELFSVE+QLLSSHSG LNLQL+ D+LLSLK
Sbjct: 445  LICGPLGADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLSTDSLLSLK 504

Query: 878  IMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQWTALQILQNALPADFDCSGERY 699
            ++ K  FL +A A Q+AM++S  L  PAL KA      WT++Q+LQ ALP+ FDC+G RY
Sbjct: 505  MLVKSCFLDRAAANQMAMFLSLPLPMPALFKAGSGDSYWTSVQMLQCALPSSFDCTGGRY 564

Query: 698  VIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYSVS 519
            +IRQ EI++FD+ RD++ SI N++  ++F  +G ++AL  F+ LQP LMENIF+ GYSV 
Sbjct: 565  LIRQREILEFDFTRDLLPSIINEVAASIFFSQGPKEALNFFDVLQPFLMENIFAHGYSVG 624

Query: 518  LEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKSST 339
            L+DF I +++ R + +++ KISPLL+ LR  Y E+V  Q+E H++ +++PV+NF LKS+ 
Sbjct: 625  LQDFSISRAVKRVINRSIGKISPLLHQLRVVYKELVAQQLEKHMQDIELPVINFALKSTK 684

Query: 338  LGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCPSE 159
            LG+LIDSKS+S+++KVV          F+RG+ Y++ LVED+ + F  K    G   PS 
Sbjct: 685  LGDLIDSKSKSALDKVVQQIGFLGQQLFERGKFYSKGLVEDVGSHFHVKCFYDGDGYPSA 744

Query: 158  AFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
             FGL++ CFFHGL+PYE+LV SI++RE++VRSSRGL+EPGTLFKNLMAILRD
Sbjct: 745  EFGLLKGCFFHGLDPYEELVHSIATREIIVRSSRGLSEPGTLFKNLMAILRD 796


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2020

 Score =  879 bits (2270), Expect = 0.0
 Identities = 426/712 (59%), Positives = 561/712 (78%), Gaps = 3/712 (0%)
 Frame = -1

Query: 2129 SHLGELKRLLSIICLKCLRMKKGQIRKNGE---KDKSSACTHCLDMPPITVRESNLKDGS 1959
            SH+ ELKR+LS++CL CL+M+K +   +     +   S C   ++   +++RE    DG+
Sbjct: 85   SHISELKRMLSVVCLNCLKMRKTKFPASSSGLAQRLISPCCQDVNAALVSIREVKTSDGA 144

Query: 1958 FCLELKVPKSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRIPAETKKKLAAKGY 1779
              L LKV KSK+ +  W+FLE+YG+ Y  +E R LLPCE +EI+KRIP ETKKKLA KG+
Sbjct: 145  CYLALKVSKSKIHDGFWSFLEKYGYRYEGDETRALLPCEAMEIIKRIPIETKKKLAGKGF 204

Query: 1778 FPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNFE 1599
            FPQDGY+L+ LPVPPNCLSVP++SDG ++MSSD S+++L+K+L++ EIIKSSRSG PNFE
Sbjct: 205  FPQDGYVLKYLPVPPNCLSVPEVSDGASVMSSDPSMTILRKLLRKVEIIKSSRSGEPNFE 264

Query: 1598 SHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKGS 1419
            SH VEAN+LQS + QY  +RG++K  R I++ FGVN E   +S KAW+EKM+TLFI KGS
Sbjct: 265  SHHVEANDLQSVVDQYFQIRGTSKPARDIETHFGVNKELTASSTKAWLEKMRTLFIRKGS 324

Query: 1418 GFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGGS 1239
            GFSSR+VITGD YKR++E+G+P E+AQ+ITFEE+V +HN+ +LQ+LVD+ LCLTY++G S
Sbjct: 325  GFSSRNVITGDCYKRINEVGIPVEVAQRITFEERVNIHNIRYLQKLVDEHLCLTYKEGVS 384

Query: 1238 MYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKINP 1059
             YSL+EGSKGH  LK GQ+VHRRIMDGDIVFINRPP+THKHSLQA  VYIH++HTVKINP
Sbjct: 385  TYSLREGSKGHIYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALYVYIHEDHTVKINP 444

Query: 1058 LICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSLK 879
            LIC PLGADFDGDC+HLFYPQSLAAKAEV+ELF+VE QLLSSHSG LNLQL+ D+LL+LK
Sbjct: 445  LICGPLGADFDGDCVHLFYPQSLAAKAEVVELFAVENQLLSSHSGNLNLQLSTDSLLALK 504

Query: 878  IMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQWTALQILQNALPADFDCSGERY 699
            ++ K+ FL +A A QLAM++   L  PALLKA      WT++QILQ ALP  FDC+G RY
Sbjct: 505  MLVKRCFLGRAAANQLAMFLLLPLPRPALLKASSDDACWTSIQILQGALPMGFDCTGGRY 564

Query: 698  VIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYSVS 519
            +IRQSEI++FD++RD + +  N+I  ++F  KG  +ALK F+ LQP LME++F+EG+SVS
Sbjct: 565  LIRQSEILEFDFSRDALPATINEIAASIFFGKGPMEALKFFDVLQPFLMESLFAEGFSVS 624

Query: 518  LEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKSST 339
            LE+F I ++I R +++++ K S LLY LRS YNE+V  Q+E H++ V++P++NF LKS+ 
Sbjct: 625  LEEFSISRAIKRIIRRSIGKASSLLYQLRSLYNELVAQQLEKHIQDVELPIINFALKSTK 684

Query: 338  LGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCPSE 159
            LG+LIDSKS+S+I+KVV          FDRGR Y++ LV+D+ + F  K    G   PS 
Sbjct: 685  LGDLIDSKSKSTIDKVVQQVGFLGQQLFDRGRFYSKGLVDDVASHFHAKCCYDGDGYPSA 744

Query: 158  AFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
             +GL++ CFF+GL+PYE++V SIS+RE++VRSSRGL+EPGTLFKNLMAILRD
Sbjct: 745  EYGLLKGCFFNGLDPYEEMVHSISTREIMVRSSRGLSEPGTLFKNLMAILRD 796


>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
          Length = 2113

 Score =  877 bits (2267), Expect = 0.0
 Identities = 438/710 (61%), Positives = 563/710 (79%), Gaps = 2/710 (0%)
 Frame = -1

Query: 2126 HLGELKRLLSIICLKCLRMKKGQIRKNGEKDKSSACTHCLDMPPITVRESNLKDGSFCLE 1947
            H+ ELKR+L+++CLKCL+ K  +++  G  ++  + T C +   +++ ++   DG++ LE
Sbjct: 86   HVDELKRMLTLLCLKCLKFKNRKVKNVGVIERVLS-TCCEETSQMSINQAKTTDGAYFLE 144

Query: 1946 LKVPKSKLR--ESMWNFLERYGFIYGYEECRTLLPCEVLEILKRIPAETKKKLAAKGYFP 1773
            LKVP ++LR  + +W+FLE+YGF YG    R LLP EV+ IL+++P +T+KKL+AKGYFP
Sbjct: 145  LKVP-TRLRHEDGLWHFLEKYGFRYGDGYSRPLLPSEVMAILRKLPQDTRKKLSAKGYFP 203

Query: 1772 QDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNFESH 1593
            QDGYILQ LPVPPNCLSVPD+SDG + MS+D S+S+LKKVL+Q EIIK+SRSG PNFES 
Sbjct: 204  QDGYILQHLPVPPNCLSVPDVSDGISTMSTDYSISLLKKVLRQVEIIKNSRSGMPNFESQ 263

Query: 1592 EVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKGSGF 1413
            E+EANELQ+A+A YL  RG+ K  R + S+FGVN E + +S KAW+EKMKTLFI KGSGF
Sbjct: 264  EIEANELQAAVALYLQFRGTGKASRDVDSRFGVNKEINVSSTKAWLEKMKTLFIRKGSGF 323

Query: 1412 SSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGGSMY 1233
            SSRSVITGD +K V EIGLP EIAQKITFEE+V  HN+  LQ+LVD+KLCLTYRDG S Y
Sbjct: 324  SSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHNILFLQKLVDEKLCLTYRDGLSQY 383

Query: 1232 SLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKINPLI 1053
            SL+EGSKGHTSL+ GQVVHRRIMDGD VFINRPP+THKHSLQA SVY+HD+HTVKINPLI
Sbjct: 384  SLREGSKGHTSLRPGQVVHRRIMDGDTVFINRPPTTHKHSLQALSVYVHDDHTVKINPLI 443

Query: 1052 CSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSLKIM 873
            C PL ADFDGDCIHLFYPQSL AKAEVLELFSVE+QLLSSH+G  NLQLAND+LLSLK++
Sbjct: 444  CGPLSADFDGDCIHLFYPQSLEAKAEVLELFSVEKQLLSSHTGAFNLQLANDSLLSLKVL 503

Query: 872  FKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQWTALQILQNALPADFDCSGERYVI 693
            F+KYFL +A AQQLAM+  + L  P++ K+    P WTA QIL+  LP  FD SGER+VI
Sbjct: 504  FRKYFLSRAAAQQLAMFAPNVLSRPSVSKSASG-PLWTAPQILELTLPPSFDSSGERHVI 562

Query: 692  RQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYSVSLE 513
             +SE++  D++ D +  I NDI+ ++F  KG ++ ++ FNS+QPLLMEN+++EG+SVSL 
Sbjct: 563  SKSEVLSVDFSWDGMTPIVNDIVTSLFFLKGPEEVIRFFNSIQPLLMENLYTEGFSVSLR 622

Query: 512  DFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKSSTLG 333
            +F +P  +   +Q+N+QKISPLL+HLR++Y+E + LQ++N+LR VK+PV NF+ KSS +G
Sbjct: 623  EFFLPLDVLESIQENLQKISPLLFHLRASYSESIALQIDNYLRNVKIPVTNFV-KSSAVG 681

Query: 332  NLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCPSEAF 153
             LIDSKSES+++KVV           D+G+ YT TLV+DM++ FQKK+  S    P+E F
Sbjct: 682  RLIDSKSESALSKVVQQIGFLGIQLSDKGKFYTETLVQDMSSLFQKKYP-SCDGYPAEEF 740

Query: 152  GLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
             L+    F GLNPY+++V SI+SREV+VRS+RGLTEPGTLFKNLMAILRD
Sbjct: 741  SLVSRPLFRGLNPYQEMVHSIASREVIVRSTRGLTEPGTLFKNLMAILRD 790


>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
            gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
            subunit [Medicago truncatula]
          Length = 2032

 Score =  877 bits (2267), Expect = 0.0
 Identities = 422/712 (59%), Positives = 560/712 (78%), Gaps = 3/712 (0%)
 Frame = -1

Query: 2129 SHLGELKRLLSIICLKCLRMKKGQIRKNGE---KDKSSACTHCLDMPPITVRESNLKDGS 1959
            SH+ ELK++LS++CL CLR+KK ++  +     +   S C   ++   +++RE    DG+
Sbjct: 167  SHVTELKKILSLVCLSCLRLKKTKVPSSSSGLAQRLLSPCCEDVNAAQVSIREVKTADGA 226

Query: 1958 FCLELKVPKSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRIPAETKKKLAAKGY 1779
              L LKV KSK+ +  W FLE+YG+ YG +  R LLPCE +EI+KR+P ETKKKLA KGY
Sbjct: 227  CYLALKVSKSKMHDGFWTFLEKYGYRYGGDHTRALLPCEAMEIIKRLPQETKKKLAGKGY 286

Query: 1778 FPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNFE 1599
            FPQDGYIL+ LPVPPNCLSVP +SDG +IMSSD ++++L+K+L++ E+I+SSRSG PNFE
Sbjct: 287  FPQDGYILKYLPVPPNCLSVPVVSDGVSIMSSDPALTILRKLLRKVEVIRSSRSGEPNFE 346

Query: 1598 SHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKGS 1419
            SH+VEAN+LQS + QYL +RG++K  R I++ +GVN E +D+S KAW+EKM+TLFI KGS
Sbjct: 347  SHQVEANDLQSVVDQYLQIRGTSKAARDIETHYGVNKELNDSSTKAWLEKMRTLFIRKGS 406

Query: 1418 GFSSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGGS 1239
            GFSSR+VITGD YK+++E+G+P E+AQ+ITFEE+V++HN+++LQ+LVD+ LCLTY++G S
Sbjct: 407  GFSSRNVITGDGYKKINEVGIPLEVAQRITFEERVSIHNIHYLQKLVDENLCLTYKEGMS 466

Query: 1238 MYSLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKINP 1059
             YSL+EGSKGHT LK GQ+VHRRIMDGD VFINRPP+THKHSLQA  VYIHD+HTVKINP
Sbjct: 467  TYSLREGSKGHTYLKPGQIVHRRIMDGDTVFINRPPTTHKHSLQALVVYIHDDHTVKINP 526

Query: 1058 LICSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSLK 879
            LIC PLGADFDGDC+HLFYPQSLAAKAEVLELFSVE+QLLSSHSG LNLQL+ D+LLSLK
Sbjct: 527  LICGPLGADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSHSGNLNLQLSADSLLSLK 586

Query: 878  IMFKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQWTALQILQNALPADFDCSGERY 699
            ++ K  FL +  A Q+AM++   L  PALLKA      WT++QILQ ALP  FDC+G RY
Sbjct: 587  MLVKSCFLDRVAANQMAMFLLLPLPMPALLKATTGDSYWTSIQILQCALPFSFDCTGGRY 646

Query: 698  VIRQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYSVS 519
            +IRQ EI++FD+ RD++ SI N+I  ++F  KG Q+AL  F+ +QP LMENIF+ G+SV 
Sbjct: 647  LIRQREILEFDFTRDILPSIINEIAASIFFSKGPQEALNFFDVIQPFLMENIFAHGFSVG 706

Query: 518  LEDFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKSST 339
            L+DF I +++ R + +++ K+SPLL  LR  Y E+V  Q+E  ++ +++PV+NF LKS+ 
Sbjct: 707  LQDFSISRAVKRVINRSIGKVSPLLRQLRGMYKELVAQQLEKVIQDIELPVINFALKSTK 766

Query: 338  LGNLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCPSE 159
            LG+LIDSKS+S+++KV+          F+RG+ Y++ LVED+ + FQ K      D PS 
Sbjct: 767  LGDLIDSKSKSAVDKVIQQIGFLGQQLFERGKFYSKGLVEDVASHFQLKCFYDKDDYPSA 826

Query: 158  AFGLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
             FGL++ CFFHGL+PYE+LV SI++RE++ RSSRGL+EPGTLFKNLMAILRD
Sbjct: 827  EFGLLKGCFFHGLDPYEELVHSIATREIIDRSSRGLSEPGTLFKNLMAILRD 878


>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1991

 Score =  876 bits (2263), Expect = 0.0
 Identities = 437/710 (61%), Positives = 551/710 (77%), Gaps = 1/710 (0%)
 Frame = -1

Query: 2129 SHLGELKRLLSIICLKCLRMKKGQIRKNGEKDKSSACTHCLDMPPITVRESNLKDGSFCL 1950
            +H+ ELK+LLS++CLKCL+MKK +     E+  S  C    D   +++ E   +DG   L
Sbjct: 85   NHVSELKKLLSLLCLKCLKMKKNKSAGLAERLLSVCCE---DAAQVSITEFKPRDGVCSL 141

Query: 1949 ELKVPKSKLRE-SMWNFLERYGFIYGYEECRTLLPCEVLEILKRIPAETKKKLAAKGYFP 1773
            +LK+P +K      WNFLERYGF YG    R LLP EV++IL+RIP ETKKKLA +GY P
Sbjct: 142  QLKLPSNKKPPPGFWNFLERYGFRYGDGVKRILLPREVMQILRRIPEETKKKLATRGYNP 201

Query: 1772 QDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNFESH 1593
            QDGYIL  +PVPPNCLSVP+ISDG TI+S+D S+SMLKKVL++ E I SSRSG  NFES 
Sbjct: 202  QDGYILNHIPVPPNCLSVPEISDGVTIISADPSISMLKKVLRRVEEISSSRSGAANFESE 261

Query: 1592 EVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKGSGF 1413
              E + LQ ++ QYL VRG+ K  R   ++FG   E  ++S KAW+EKM+TLFI KGSGF
Sbjct: 262  IDEVDLLQESVDQYLQVRGTGKASRESDARFGGTKELSESSTKAWLEKMRTLFIRKGSGF 321

Query: 1412 SSRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGGSMY 1233
            SSR+VITGDAY+RV+E+G+P +IAQ+ITFEEKV  HN+  LQELVD KLCLTY DG S Y
Sbjct: 322  SSRTVITGDAYRRVNEVGIPYDIAQRITFEEKVNAHNIRRLQELVDSKLCLTYSDGSSTY 381

Query: 1232 SLKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKINPLI 1053
            SL+EGSKGHT LK GQVVHRRIMDGD+VF+NRPP+THKHSLQA  VY+H++  VKINPLI
Sbjct: 382  SLREGSKGHTFLKPGQVVHRRIMDGDLVFVNRPPTTHKHSLQALQVYVHEDKVVKINPLI 441

Query: 1052 CSPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSLKIM 873
            C PL ADFDGDCIHLFYPQSLAAKAEV+ELFSVE+QLLSSHSGK NLQLA D+LLSLK+M
Sbjct: 442  CGPLSADFDGDCIHLFYPQSLAAKAEVMELFSVEKQLLSSHSGKPNLQLATDSLLSLKLM 501

Query: 872  FKKYFLKKATAQQLAMYVSSGLQFPALLKACGPVPQWTALQILQNALPADFDCSGERYVI 693
            FKKYF  KA  QQLAM+VSS L  PALLKA   VP WTALQILQ ALPA F  SG+R+++
Sbjct: 502  FKKYFFNKAAMQQLAMFVSSSLPQPALLKANSTVPCWTALQILQTALPAQFQSSGDRHLV 561

Query: 692  RQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYSVSLE 513
            + SE++  D +  +V S+ NDI  ++F +K ++D L  FNS+QPLLMEN+FSEG+SV LE
Sbjct: 562  KDSEVLLLDCSTSLVPSLINDIGTSIFFEKSAEDVLSFFNSMQPLLMENLFSEGFSVGLE 621

Query: 512  DFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKSSTLG 333
            DF +P++  +++QK +++ISPLL+H+R+ YNE+VE+Q+ENH+R VK PV NFIL SS LG
Sbjct: 622  DFALPRASIQDIQKGLKEISPLLFHMRTVYNELVEMQLENHIRKVKEPVSNFILNSSALG 681

Query: 332  NLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCPSEAF 153
            +LIDSKS+S++NKVV          +D+G++Y++TLVED+++ +Q K+    +D PS  F
Sbjct: 682  DLIDSKSDSAMNKVVQQVGFLGRQLYDQGKLYSKTLVEDVSSLYQNKYPSDIVDYPSAEF 741

Query: 152  GLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
            GL+   F HGL+P E ++ SI++REV+VRSSRGL+EPGTLFKNLMA LRD
Sbjct: 742  GLVHRGFVHGLDPVEGMIHSIATREVIVRSSRGLSEPGTLFKNLMATLRD 791


>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
          Length = 1379

 Score =  870 bits (2249), Expect = 0.0
 Identities = 432/710 (60%), Positives = 557/710 (78%), Gaps = 2/710 (0%)
 Frame = -1

Query: 2126 HLGELKRLLSIICLKCLRMKKGQIRKNGEKDKSSACTHCLDMPPITVRESNLKDGSFCLE 1947
            H+ ELK++LS++CLKCL++K  +++  G  ++    + C +   ITV E+   DG+  LE
Sbjct: 86   HITELKKMLSLLCLKCLKLKTRKVKNIGAMERM-LMSCCEETSQITVYETKTSDGASYLE 144

Query: 1946 LKVP-KSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRIPAETKKKLAAKGYFPQ 1770
            LKVP KSKLRE  WNFLE++GF YG+   R LLP EV+ ILK++P ETKK L ++GYFPQ
Sbjct: 145  LKVPPKSKLREGYWNFLEKHGFRYGHTYSRPLLPSEVMSILKKLPKETKKSLLSRGYFPQ 204

Query: 1769 DGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIKSSRSGPPNFESHE 1590
            +GY+L+ LPVPPNCL VPDISDG + MS D S+++LKKVL+Q E+IK+SRSG PNFESHE
Sbjct: 205  EGYVLRFLPVPPNCLCVPDISDGVSTMSKDYSITLLKKVLRQVEVIKNSRSGMPNFESHE 264

Query: 1589 VEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNESDDTSAKAWIEKMKTLFISKGSGFS 1410
            +EANELQ++++QYL  RG+ K  R + S+FGV+ E + +S KAW+EKMKTLFI KGSGFS
Sbjct: 265  IEANELQASVSQYLQFRGTGKAARDVDSRFGVHKEINSSSTKAWLEKMKTLFIRKGSGFS 324

Query: 1409 SRSVITGDAYKRVDEIGLPSEIAQKITFEEKVTVHNMNHLQELVDKKLCLTYRDGGSMYS 1230
            SRSV+TGDA+K V EIGLP EIAQKITFEE+V VHN++ LQ+LVD+KLCLTYRDG S YS
Sbjct: 325  SRSVVTGDAFKGVSEIGLPYEIAQKITFEERVNVHNIDFLQKLVDEKLCLTYRDGSSTYS 384

Query: 1229 LKEGSKGHTSLKVGQVVHRRIMDGDIVFINRPPSTHKHSLQAFSVYIHDEHTVKINPLIC 1050
            L+EGSKGHT LK GQ+VHRRIMDGD+ FINRPP+THKHSLQA SVY+HD HTVKINPLIC
Sbjct: 385  LREGSKGHTFLKPGQIVHRRIMDGDLAFINRPPTTHKHSLQALSVYVHDGHTVKINPLIC 444

Query: 1049 SPLGADFDGDCIHLFYPQSLAAKAEVLELFSVEQQLLSSHSGKLNLQLANDALLSLKIMF 870
             PL ADFDGDCIHLFYPQSL A+AEV+ELFSVE+QLLSSH+G  NLQL  D+LLSLKI+F
Sbjct: 445  GPLAADFDGDCIHLFYPQSLEARAEVVELFSVEKQLLSSHTGNFNLQLTTDSLLSLKILF 504

Query: 869  KKYFLKKATAQQLAMYVSSGLQFPALLKA-CGPVPQWTALQILQNALPADFDCSGERYVI 693
              +FL+K  AQQLAM+V+  L  PA++K+  GP+  WTA QILQ  LP+ F CSGER++I
Sbjct: 505  GNHFLRKKAAQQLAMFVNM-LAGPAVVKSKIGPL--WTASQILQATLPSSFGCSGERHLI 561

Query: 692  RQSEIVKFDYNRDVVQSIFNDIINAVFLKKGSQDALKVFNSLQPLLMENIFSEGYSVSLE 513
             +SE++  D +RD++ ++ ND++ ++F  KG +D L  FNS+QPLLME++ +EG+SVSL+
Sbjct: 562  AKSEVLNLDVDRDLMTAVVNDLVTSLFFLKGPKDVLGFFNSVQPLLMESLQAEGFSVSLK 621

Query: 512  DFCIPKSITRELQKNVQKISPLLYHLRSTYNEVVELQVENHLRGVKVPVVNFILKSSTLG 333
            DF +P+ +   +++N+QKISPLL HLR  Y+E + LQ+E++L  VK PV  FI+ SS +G
Sbjct: 622  DFFLPREVLEGIRENIQKISPLLSHLRDHYSESIALQLESYLSSVKTPVTEFIVNSSAIG 681

Query: 332  NLIDSKSESSINKVVXXXXXXXXXXFDRGRIYTRTLVEDMTAFFQKKFAVSGIDCPSEAF 153
             L DS+SES ++KVV            +G+ YT  LV+D+++ F+ K+  S  DCP+E F
Sbjct: 682  FLTDSRSESGLSKVVQQIGFCGTQLSSKGKFYTERLVKDLSSLFRSKYP-SSDDCPTEDF 740

Query: 152  GLIRSCFFHGLNPYEKLVDSISSREVLVRSSRGLTEPGTLFKNLMAILRD 3
            GL+    F GLNPY+++V SISSREV+VRSSRGLTEPGTLFKNLMAILRD
Sbjct: 741  GLVCQPLFRGLNPYQEMVHSISSREVIVRSSRGLTEPGTLFKNLMAILRD 790