BLASTX nr result

ID: Papaver23_contig00034413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034413
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana] gi|1...   102   3e-20
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   102   3e-20
dbj|BAF01202.1| hypothetical protein [Arabidopsis thaliana]           102   3e-20
emb|CAB41726.1| putative protein [Arabidopsis thaliana] gi|72679...   102   3e-20
ref|XP_002872660.1| F-box family protein [Arabidopsis lyrata sub...   100   2e-19

>ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana]
           gi|145333023|ref|NP_001078377.1| F-box protein CPR30
           [Arabidopsis thaliana]
           gi|142989747|sp|Q9SU30.2|CPR30_ARATH RecName: Full=F-box
           protein CPR30; AltName: Full=Protein CONSTITUTIVE
           EXPRESSER OF PR GENES 30 gi|332657747|gb|AEE83147.1|
           F-box protein CPR30 [Arabidopsis thaliana]
           gi|332657748|gb|AEE83148.1| F-box protein CPR30
           [Arabidopsis thaliana]
          Length = 413

 Score =  102 bits (255), Expect = 3e-20
 Identities = 62/166 (37%), Positives = 90/166 (54%), Gaps = 18/166 (10%)
 Frame = -1

Query: 454 YGFYYDYSIEDYKLIKMVAISGESA-RLG------VQIFSLRSNSWKNSDK--------F 320
           YG  YD   +DYK+++MV    +S   LG      V++FSL+ NSWK  +         F
Sbjct: 140 YGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLF 199

Query: 319 IPYESSSLQRSSGVLVNRALHWLLIT-PGNRTSNIIVSFNTCDEGFDDLALP*AVENK-- 149
             Y     +R  GVL   +LHW+L   PG    N+IV F+   E F+ +  P AV N   
Sbjct: 200 YFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNV 259

Query: 148 DVTIELGKLDGCLCLLVGSLGDRADLWVMQKYGLKQSWTKIFTTTK 11
           D+ +++G LDGCLCL+        D+W+M++Y ++ SWTK+FT  K
Sbjct: 260 DIQMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQK 305


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  102 bits (255), Expect = 3e-20
 Identities = 58/164 (35%), Positives = 95/164 (57%), Gaps = 4/164 (2%)
 Frame = -1

Query: 490 SCGVKIVENNSDYGFYYDYSIEDYKLIKMVAISGESARL---GVQIFSLRSNSWKNSDKF 320
           SC V +      +GF YD   +DYKL+++    G   R     V+++SLR  SW+     
Sbjct: 143 SCSVYV------FGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGD- 195

Query: 319 IPYESSSLQRSSGVLVNRALHWLL-ITPGNRTSNIIVSFNTCDEGFDDLALP*AVENKDV 143
           +PY       ++GV  N ALHW++   P +  +NI+V+ +   E + ++  P   ++K+ 
Sbjct: 196 MPY-CVHYPGANGVFANGALHWVVGENPESNVANIVVALDLGVEDYREVLQP-EYKDKNF 253

Query: 142 TIELGKLDGCLCLLVGSLGDRADLWVMQKYGLKQSWTKIFTTTK 11
            I+LG L GCLC L   LG+R D+W+M++YG+K+SWTK+F+  +
Sbjct: 254 YIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLFSVAQ 297


>dbj|BAF01202.1| hypothetical protein [Arabidopsis thaliana]
          Length = 413

 Score =  102 bits (255), Expect = 3e-20
 Identities = 62/166 (37%), Positives = 90/166 (54%), Gaps = 18/166 (10%)
 Frame = -1

Query: 454 YGFYYDYSIEDYKLIKMVAISGESA-RLG------VQIFSLRSNSWKNSDK--------F 320
           YG  YD   +DYK+++MV    +S   LG      V++FSL+ NSWK  +         F
Sbjct: 140 YGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLF 199

Query: 319 IPYESSSLQRSSGVLVNRALHWLLIT-PGNRTSNIIVSFNTCDEGFDDLALP*AVENK-- 149
             Y     +R  GVL   +LHW+L   PG    N+IV F+   E F+ +  P AV N   
Sbjct: 200 YFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNV 259

Query: 148 DVTIELGKLDGCLCLLVGSLGDRADLWVMQKYGLKQSWTKIFTTTK 11
           D+ +++G LDGCLCL+        D+W+M++Y ++ SWTK+FT  K
Sbjct: 260 DIQMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQK 305


>emb|CAB41726.1| putative protein [Arabidopsis thaliana] gi|7267958|emb|CAB78299.1|
           putative protein [Arabidopsis thaliana]
          Length = 408

 Score =  102 bits (255), Expect = 3e-20
 Identities = 62/166 (37%), Positives = 90/166 (54%), Gaps = 18/166 (10%)
 Frame = -1

Query: 454 YGFYYDYSIEDYKLIKMVAISGESA-RLG------VQIFSLRSNSWKNSDK--------F 320
           YG  YD   +DYK+++MV    +S   LG      V++FSL+ NSWK  +         F
Sbjct: 140 YGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLF 199

Query: 319 IPYESSSLQRSSGVLVNRALHWLLIT-PGNRTSNIIVSFNTCDEGFDDLALP*AVENK-- 149
             Y     +R  GVL   +LHW+L   PG    N+IV F+   E F+ +  P AV N   
Sbjct: 200 YFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNV 259

Query: 148 DVTIELGKLDGCLCLLVGSLGDRADLWVMQKYGLKQSWTKIFTTTK 11
           D+ +++G LDGCLCL+        D+W+M++Y ++ SWTK+FT  K
Sbjct: 260 DIQMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQK 305


>ref|XP_002872660.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318497|gb|EFH48919.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score =  100 bits (248), Expect = 2e-19
 Identities = 61/167 (36%), Positives = 89/167 (53%), Gaps = 19/167 (11%)
 Frame = -1

Query: 454 YGFYYDYSIEDYKLIKMVAISGESA-RLG------VQIFSLRSNSWKNSDK--------- 323
           YGF YD   +DYK+++MV    +S   LG      V++FSL+ NSWK  +          
Sbjct: 140 YGFGYDSVSDDYKVVRMVQFKIDSDDELGCSFPYEVKVFSLKKNSWKRVESVSTSSIRLL 199

Query: 322 FIPYESSSLQRSSGVLVNRALHWLLIT-PGNRTSNIIVSFNTCDEGFDDLALP*AVENK- 149
           F  Y     +R  GVL   +LHW+L   PG    N+IV F+   E F  +  P  V N  
Sbjct: 200 FYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFGIVRFPETVANGN 259

Query: 148 -DVTIELGKLDGCLCLLVGSLGDRADLWVMQKYGLKQSWTKIFTTTK 11
            D+ +++  LDGCLCL+     +  D+W+M++Y ++ SWTK+FT  K
Sbjct: 260 VDIQMDISVLDGCLCLMCNYDQEYVDVWMMKEYNVRSSWTKVFTVQK 306


Top