BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034406
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    83   2e-14
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ...    78   9e-13
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    78   9e-13
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              77   1e-12
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              77   2e-12

>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 8/170 (4%)
 Frame = -2

Query: 486  LWFLAHKKLLVRAHLSKIGLDINPECPLCHLYDETLDHLFVDCPISAQIWMKLQDSWNIN 307
            LW    K L  R+ L   G+DI+P CP C   +ET++H+   CP +A IW      W   
Sbjct: 1375 LWRTISKALPTRSRLLTRGMDIDPHCPRCPTEEETINHVLFTCPYAASIWGLSNFPW--- 1431

Query: 306  LPSMHIS------LSAILHTCSLSLMNDVLPWSVFYPYILWNIWIARNNVVFNHFTFDTD 145
            LP    S      +S ++++ S + +N     + F  +++W +W ARNN+VFN F+    
Sbjct: 1432 LPGHTFSQDTEENISFLINSFSNNTLNTEQRLAPF--WLIWRLWKARNNLVFNKFSESCS 1489

Query: 144  QVLRFAYSQAYEHWLYVEKPKKLNLLPKQT--VFINWNSPPFPFYKLNCD 1
            +V+    ++  E    V + +  ++L + +    + W  P FP  K N D
Sbjct: 1490 RVVTQTEAEVNEWLQSVNRREDASVLTRSSHRANVRWKKPVFPLVKCNFD 1539


>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
           reverse transcriptase [Arabidopsis thaliana]
           gi|332641254|gb|AEE74775.1| RNase H domain-containing
           protein [Arabidopsis thaliana]
          Length = 484

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
 Frame = -2

Query: 486 LWFLAHKKLLVRAHLSKIGLDINPECPLCHLYDETLDHLFVDCPISAQIWMKLQDSWNIN 307
           LW    + L     L+  G+ I+P CP CH  +E+++H    CP +   W +L DS  I 
Sbjct: 175 LWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAW-RLSDSSLIR 233

Query: 306 LPSM----HISLSAILHTCSLSLMNDVLPWSVFYPYILWNIWIARNNVVFNHFTFDTDQV 139
              M      ++S IL+    + M+D     +   +++W IW ARNNVVFN F     + 
Sbjct: 234 NQLMSNDFEENISNILNFVQDTTMSDF--HKLLPVWLIWRIWKARNNVVFNKFRESPSKT 291

Query: 138 LRFAYSQAYEHWLYVEKPKKLNLLPKQTVF---INWNSPPFPFYKLNCD 1
           +  A ++ ++ WL   +  K    P + +    I W +PP  + K N D
Sbjct: 292 VLSAKAETHD-WLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFD 339


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
 Frame = -2

Query: 486  LWFLAHKKLLVRAHLSKIGLDINPECPLCHLYDETLDHLFVDCPISAQIWMKLQDSWNIN 307
            LW    + L     L+  G+ I+P CP CH  +E+++H    CP +   W +L DS  I 
Sbjct: 1441 LWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAW-RLSDSSLIR 1499

Query: 306  LPSM----HISLSAILHTCSLSLMNDVLPWSVFYPYILWNIWIARNNVVFNHFTFDTDQV 139
               M      ++S IL+    + M+D     +   +++W IW ARNNVVFN F     + 
Sbjct: 1500 NQLMSNDFEENISNILNFVQDTTMSDF--HKLLPVWLIWRIWKARNNVVFNKFRESPSKT 1557

Query: 138  LRFAYSQAYEHWLYVEKPKKLNLLPKQTVF---INWNSPPFPFYKLNCD 1
            +  A ++ ++ WL   +  K    P + +    I W +PP  + K N D
Sbjct: 1558 VLSAKAETHD-WLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFD 1605


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
 Frame = -2

Query: 486  LWFLAHKKLLVRAHLSKIGLDINPECPLCHLYDETLDHLFVDCPISAQIWMKLQDSWNIN 307
            +W +    L+V     + GL     CP+C   DETLDHLF  C ++   W          
Sbjct: 1053 MWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQ 1112

Query: 306  LPSMHISLSAILHTCSLSLMNDVLP--WSVFYPYILWNIWIARNNVVFNHFTFDTDQVLR 133
              S H+ + + +     S   D     WS+ +PYILWN+W ARN +VF++       +L 
Sbjct: 1113 T-SNHLHMHSWMKAACSSQQKDGYSTNWSLIFPYILWNLWKARNRLVFDNNITAPSDILN 1171

Query: 132  FAYSQAYEHWLYVEKPKKLNLLPKQTVFINWNSPPFPFYKLNCD 1
             ++ ++ E    +   K+  L      ++ W+ P   F KLN D
Sbjct: 1172 RSFMESSEARCLL--AKRTGLQTAFQTWVVWSPPAAGFTKLNSD 1213


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
 Frame = -2

Query: 486  LWFLAHKKLLVRAHLSKIGLDINPECPLCHLYDETLDHLFVDCPISAQIWMKLQDSWNIN 307
            +W +    L+V     + GL     CP+C   DETLDHLF  C ++   W          
Sbjct: 1585 MWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQ 1644

Query: 306  LPSMHISLSAILHTCSLSLMNDVLP--WSVFYPYILWNIWIARNNVVFNHFTFDTDQVLR 133
              S H+ + + +     S   D     WS+ +PYILWN+W ARN +VF++       +L 
Sbjct: 1645 T-SNHLHMHSWMKAACSSQQKDGYGTNWSLIFPYILWNLWKARNRLVFDNNITAPSDILN 1703

Query: 132  FAYSQAYEHWLYVEKPKKLNLLPKQTVFINWNSPPFPFYKLNCD 1
             ++ ++ E    +   K+  L      ++ W+ P   F KLN D
Sbjct: 1704 RSFMESSEARCLL--AKRTGLQTAFQTWVVWSPPAAGFTKLNSD 1745