BLASTX nr result

ID: Papaver23_contig00034380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034380
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620513.1| DNA mismatch repair protein Msh6-2 [Medicago...   254   4e-66
emb|CBI28088.3| unnamed protein product [Vitis vinifera]              254   4e-66
ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-...   254   4e-66
emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]   253   1e-65
tpg|DAA53155.1| TPA: MUS2 protein [Zea mays]                          250   7e-65

>ref|XP_003620513.1| DNA mismatch repair protein Msh6-2 [Medicago truncatula]
            gi|355495528|gb|AES76731.1| DNA mismatch repair protein
            Msh6-2 [Medicago truncatula]
          Length = 1160

 Score =  254 bits (650), Expect = 4e-66
 Identities = 125/163 (76%), Positives = 144/163 (88%)
 Frame = +2

Query: 2    TASVLRNATDDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVHCRLLFATHYHSLTKEF 181
            TASVL NAT DSLVILDELGRGTSTFDGYAIAYAVFRHL+EKV+CRLLFATHYH LTKEF
Sbjct: 969  TASVLHNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEF 1028

Query: 182  SSHPHVSLQHMACSFKPNTSKSLFKGDQELVFLYRLTSGACPESYGLQVALMAGIPEKLV 361
            +SHP V++QHMAC+FK + S +L K DQELVFLYRL  GACPESYGLQVALMAGIPEK V
Sbjct: 1029 ASHPRVTMQHMACAFK-SKSDTLSKQDQELVFLYRLAPGACPESYGLQVALMAGIPEKTV 1087

Query: 362  RAASRAGQVMKASVAENFKSSEQRASFSTLHEQWLKTVLAIAK 490
              AS+A Q MK S+ +NF+SSEQR+ FS+LHE+WLKT+++IA+
Sbjct: 1088 NVASKASQQMKISIGKNFRSSEQRSEFSSLHEEWLKTLMSIAR 1130


>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  254 bits (650), Expect = 4e-66
 Identities = 124/166 (74%), Positives = 147/166 (88%)
 Frame = +2

Query: 2    TASVLRNATDDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVHCRLLFATHYHSLTKEF 181
            TASVLRNAT DSLV+LDELGRGTSTFDGYAIAYAVFRHLVEKV+CRLLFATHYH LTKEF
Sbjct: 925  TASVLRNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTKEF 984

Query: 182  SSHPHVSLQHMACSFKPNTSKSLFKGDQELVFLYRLTSGACPESYGLQVALMAGIPEKLV 361
            +SHPHV+LQHMAC+F     KS   G+QELVFLY+LTSGACPESYGLQVALMAG+P+++V
Sbjct: 985  ASHPHVTLQHMACTFNLKGEKS-SGGEQELVFLYQLTSGACPESYGLQVALMAGVPKEVV 1043

Query: 362  RAASRAGQVMKASVAENFKSSEQRASFSTLHEQWLKTVLAIAKGAE 499
             AAS AG++MK S+ E+F++SEQR+ FSTLHE+WLK +L +++  E
Sbjct: 1044 EAASTAGRMMKQSIGESFRTSEQRSEFSTLHEEWLKALLTVSRLGE 1089


>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
          Length = 1122

 Score =  254 bits (650), Expect = 4e-66
 Identities = 124/166 (74%), Positives = 147/166 (88%)
 Frame = +2

Query: 2    TASVLRNATDDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVHCRLLFATHYHSLTKEF 181
            TASVLRNAT DSLV+LDELGRGTSTFDGYAIAYAVFRHLVEKV+CRLLFATHYH LTKEF
Sbjct: 921  TASVLRNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTKEF 980

Query: 182  SSHPHVSLQHMACSFKPNTSKSLFKGDQELVFLYRLTSGACPESYGLQVALMAGIPEKLV 361
            +SHPHV+LQHMAC+F     KS   G+QELVFLY+LTSGACPESYGLQVALMAG+P+++V
Sbjct: 981  ASHPHVTLQHMACTFNLKGEKS-SGGEQELVFLYQLTSGACPESYGLQVALMAGVPKEVV 1039

Query: 362  RAASRAGQVMKASVAENFKSSEQRASFSTLHEQWLKTVLAIAKGAE 499
             AAS AG++MK S+ E+F++SEQR+ FSTLHE+WLK +L +++  E
Sbjct: 1040 EAASTAGRMMKQSIGESFRTSEQRSEFSTLHEEWLKALLTVSRLGE 1085


>emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]
          Length = 1090

 Score =  253 bits (646), Expect = 1e-65
 Identities = 124/166 (74%), Positives = 146/166 (87%)
 Frame = +2

Query: 2    TASVLRNATDDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVHCRLLFATHYHSLTKEF 181
            TASVLRNAT DSLV+LDELGRGTSTFDGYAIAYAVFRHLVEKV+CRLLFATHYH LTKEF
Sbjct: 889  TASVLRNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTKEF 948

Query: 182  SSHPHVSLQHMACSFKPNTSKSLFKGDQELVFLYRLTSGACPESYGLQVALMAGIPEKLV 361
            +SHPHV+LQHMAC+F     KS   G+QELVFLY+LTSGACPESYGLQVALMAG P+++V
Sbjct: 949  ASHPHVTLQHMACTFNLKGEKS-SGGEQELVFLYQLTSGACPESYGLQVALMAGXPKEVV 1007

Query: 362  RAASRAGQVMKASVAENFKSSEQRASFSTLHEQWLKTVLAIAKGAE 499
             AAS AG++MK S+ E+F++SEQR+ FSTLHE+WLK +L +++  E
Sbjct: 1008 EAASTAGRMMKQSIGESFRTSEQRSEFSTLHEEWLKALLTVSRLGE 1053


>tpg|DAA53155.1| TPA: MUS2 protein [Zea mays]
          Length = 1184

 Score =  250 bits (639), Expect = 7e-65
 Identities = 124/162 (76%), Positives = 139/162 (85%)
 Frame = +2

Query: 2    TASVLRNATDDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVHCRLLFATHYHSLTKEF 181
            TASVL+ AT DSLV+LDELGRGTSTFDGYAIAYAVFRHLVE+V CR LFATHYHSLTKEF
Sbjct: 996  TASVLQKATVDSLVLLDELGRGTSTFDGYAIAYAVFRHLVERVRCRQLFATHYHSLTKEF 1055

Query: 182  SSHPHVSLQHMACSFKPNTSKSLFKGDQELVFLYRLTSGACPESYGLQVALMAGIPEKLV 361
            +SHPHVSLQHMAC FKP +  +   G +EL FLYRLTSGACPESYGLQVA MAGIP+ +V
Sbjct: 1056 ASHPHVSLQHMACMFKPRSDGN---GQKELTFLYRLTSGACPESYGLQVAAMAGIPKSIV 1112

Query: 362  RAASRAGQVMKASVAENFKSSEQRASFSTLHEQWLKTVLAIA 487
              AS AGQVM+A +A NFKSSEQRA FSTLHE+WL+  LA++
Sbjct: 1113 EKASVAGQVMRAKIAGNFKSSEQRAEFSTLHEEWLRAALAVS 1154


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