BLASTX nr result

ID: Papaver23_contig00034273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034273
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39461.3| unnamed protein product [Vitis vinifera]              229   3e-58
ref|XP_002269673.1| PREDICTED: pentatricopeptide repeat-containi...   229   3e-58
ref|XP_002892228.1| EMB2748 [Arabidopsis lyrata subsp. lyrata] g...   224   7e-57
ref|XP_002526313.1| conserved hypothetical protein [Ricinus comm...   223   2e-56
ref|NP_563712.1| uncharacterized protein [Arabidopsis thaliana] ...   222   4e-56

>emb|CBI39461.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  229 bits (584), Expect = 3e-58
 Identities = 117/195 (60%), Positives = 138/195 (70%), Gaps = 8/195 (4%)
 Frame = +2

Query: 32  TQKEMKPSAEV--------QNDNPAMQELPKKDLSVIGKREIGENVSGKDKVKFLMNTLL 187
           TQ +M  ++ V        Q +N  M     KD + + K +IGENVS KDK+ FL+ TLL
Sbjct: 33  TQTQMSDTSNVGEVAFLGGQCNNQPMYHDSGKDAASVHKHQIGENVSRKDKINFLVTTLL 92

Query: 188 HLEDSKETIYSTLDAWVASEQKFPTVSLKRTLIALEREHQWHRVIQVIKWMLSKGQCTTM 367
            L+DSKE +Y  LDAWVA EQ FP  SLKR LI LE+E QWHRVIQV+KWMLSKGQ TTM
Sbjct: 93  DLKDSKEAVYGALDAWVAWEQNFPIASLKRVLITLEKEQQWHRVIQVVKWMLSKGQGTTM 152

Query: 368 GTYGQLIRALEKDRRPEEAHIIWARKVINNMHSVPKELCDLMISIYYQNNMFERLVKLFK 547
           GTYGQLIRAL+ D R EEAH  W +K+  ++HSVP  LC  MIS+YY+NNM E LVKLFK
Sbjct: 153 GTYGQLIRALDMDHRAEEAHEFWVKKIGTDLHSVPWHLCHRMISVYYRNNMLENLVKLFK 212

Query: 548 RLEAYDRKPPGKSVV 592
            LEA+DRKP  K VV
Sbjct: 213 GLEAFDRKPQDKLVV 227


>ref|XP_002269673.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
           chloroplastic-like isoform 1 [Vitis vinifera]
          Length = 300

 Score =  229 bits (584), Expect = 3e-58
 Identities = 117/195 (60%), Positives = 138/195 (70%), Gaps = 8/195 (4%)
 Frame = +2

Query: 32  TQKEMKPSAEV--------QNDNPAMQELPKKDLSVIGKREIGENVSGKDKVKFLMNTLL 187
           TQ +M  ++ V        Q +N  M     KD + + K +IGENVS KDK+ FL+ TLL
Sbjct: 37  TQTQMSDTSNVGEVAFLGGQCNNQPMYHDSGKDAASVHKHQIGENVSRKDKINFLVTTLL 96

Query: 188 HLEDSKETIYSTLDAWVASEQKFPTVSLKRTLIALEREHQWHRVIQVIKWMLSKGQCTTM 367
            L+DSKE +Y  LDAWVA EQ FP  SLKR LI LE+E QWHRVIQV+KWMLSKGQ TTM
Sbjct: 97  DLKDSKEAVYGALDAWVAWEQNFPIASLKRVLITLEKEQQWHRVIQVVKWMLSKGQGTTM 156

Query: 368 GTYGQLIRALEKDRRPEEAHIIWARKVINNMHSVPKELCDLMISIYYQNNMFERLVKLFK 547
           GTYGQLIRAL+ D R EEAH  W +K+  ++HSVP  LC  MIS+YY+NNM E LVKLFK
Sbjct: 157 GTYGQLIRALDMDHRAEEAHEFWVKKIGTDLHSVPWHLCHRMISVYYRNNMLENLVKLFK 216

Query: 548 RLEAYDRKPPGKSVV 592
            LEA+DRKP  K VV
Sbjct: 217 GLEAFDRKPQDKLVV 231


>ref|XP_002892228.1| EMB2748 [Arabidopsis lyrata subsp. lyrata]
           gi|297338070|gb|EFH68487.1| EMB2748 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 395

 Score =  224 bits (572), Expect = 7e-57
 Identities = 104/165 (63%), Positives = 131/165 (79%)
 Frame = +2

Query: 98  KKDLSVIGKREIGENVSGKDKVKFLMNTLLHLEDSKETIYSTLDAWVASEQKFPTVSLKR 277
           K++     K +IGEN+  KDK+KFL+NTLL +ED+KE +Y  LDAWVA E+ FP  SLKR
Sbjct: 126 KENAETPRKHQIGENIPKKDKIKFLVNTLLDMEDNKEAVYGALDAWVAWERNFPIASLKR 185

Query: 278 TLIALEREHQWHRVIQVIKWMLSKGQCTTMGTYGQLIRALEKDRRPEEAHIIWARKVINN 457
            +  LE+EHQWHR+IQVIKW+LSKGQ  TMGTYGQLIRAL+ DRR EEAH+IW +K+ N+
Sbjct: 186 VIAILEKEHQWHRMIQVIKWILSKGQGNTMGTYGQLIRALDMDRRAEEAHVIWRKKIGND 245

Query: 458 MHSVPKELCDLMISIYYQNNMFERLVKLFKRLEAYDRKPPGKSVV 592
           +HSVP +LC  M+ IY++NNM + LVKLFK LE+YDRKPP K +V
Sbjct: 246 LHSVPWQLCLQMMRIYFRNNMLQELVKLFKDLESYDRKPPDKHIV 290


>ref|XP_002526313.1| conserved hypothetical protein [Ricinus communis]
           gi|223534394|gb|EEF36102.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 300

 Score =  223 bits (568), Expect = 2e-56
 Identities = 108/192 (56%), Positives = 137/192 (71%)
 Frame = +2

Query: 17  RAKLSTQKEMKPSAEVQNDNPAMQELPKKDLSVIGKREIGENVSGKDKVKFLMNTLLHLE 196
           +A++S +    P  E Q+D         +    + K +IG+NVS K+K+ FL+ TLL L+
Sbjct: 35  QAQISNRNTPSPRPEDQDDYKTTCHNSNQSAGGVQKNQIGKNVSRKEKIDFLLKTLLDLK 94

Query: 197 DSKETIYSTLDAWVASEQKFPTVSLKRTLIALEREHQWHRVIQVIKWMLSKGQCTTMGTY 376
           DSKE +Y  LDAWVA E  FP  SLKR LI LE+E QWH+V+QVIKWMLSKGQ  TMGTY
Sbjct: 95  DSKEAVYGALDAWVAWEHNFPIASLKRVLILLEKEQQWHKVVQVIKWMLSKGQGNTMGTY 154

Query: 377 GQLIRALEKDRRPEEAHIIWARKVINNMHSVPKELCDLMISIYYQNNMFERLVKLFKRLE 556
           GQLIRAL+ D R  EAH+ W +K+  ++HSVP +LC  MIS+YY+NNM E LVKLFK LE
Sbjct: 155 GQLIRALDMDHRANEAHMFWLKKIGLDLHSVPWQLCHRMISVYYRNNMLESLVKLFKGLE 214

Query: 557 AYDRKPPGKSVV 592
           A+DRKPP KS++
Sbjct: 215 AFDRKPPDKSIL 226


>ref|NP_563712.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13430646|gb|AAK25945.1|AF360235_1 unknown protein
           [Arabidopsis thaliana] gi|14532820|gb|AAK64092.1|
           unknown protein [Arabidopsis thaliana]
           gi|332189597|gb|AEE27718.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 381

 Score =  222 bits (565), Expect = 4e-56
 Identities = 102/157 (64%), Positives = 128/157 (81%)
 Frame = +2

Query: 122 KREIGENVSGKDKVKFLMNTLLHLEDSKETIYSTLDAWVASEQKFPTVSLKRTLIALERE 301
           K +IGEN+  KDK+KFL+NTLL +ED+KE +Y  LDAWVA E+ FP  SLK  + +LE+E
Sbjct: 133 KHQIGENIPKKDKIKFLVNTLLDIEDNKEAVYGALDAWVAWERNFPIASLKIVIASLEKE 192

Query: 302 HQWHRVIQVIKWMLSKGQCTTMGTYGQLIRALEKDRRPEEAHIIWARKVINNMHSVPKEL 481
           HQWHR++QVIKW+LSKGQ  TMGTYGQLIRAL+ DRR EEAH+IW +KV N++HSVP +L
Sbjct: 193 HQWHRMVQVIKWILSKGQGNTMGTYGQLIRALDMDRRAEEAHVIWRKKVGNDLHSVPWQL 252

Query: 482 CDLMISIYYQNNMFERLVKLFKRLEAYDRKPPGKSVV 592
           C  M+ IY++NNM + LVKLFK LE+YDRKPP K +V
Sbjct: 253 CLQMMRIYFRNNMLQELVKLFKDLESYDRKPPDKHIV 289


Top