BLASTX nr result

ID: Papaver23_contig00034251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034251
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609896.1| hypothetical protein MTR_4g124160 [Medicago ...    70   2e-10
ref|NP_189037.1| F-box protein [Arabidopsis thaliana] gi|7527344...    57   2e-06
ref|XP_002873126.1| F-box family protein [Arabidopsis lyrata sub...    56   5e-06
ref|XP_002310219.1| predicted protein [Populus trichocarpa] gi|2...    56   5e-06
ref|XP_002872473.1| hypothetical protein ARALYDRAFT_911262 [Arab...    55   6e-06

>ref|XP_003609896.1| hypothetical protein MTR_4g124160 [Medicago truncatula]
           gi|355510951|gb|AES92093.1| hypothetical protein
           MTR_4g124160 [Medicago truncatula]
          Length = 424

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 24/146 (16%)
 Frame = +3

Query: 210 LLSSSNGLILCTIRLFYQTSYYVCNPLTQKFVLIPLPPG-----NEYGKTVTGFICNDE- 371
           ++  SNGL LC  +      Y+VCN LT+ ++ +PLPP      N+  + + GF+C    
Sbjct: 118 IVGFSNGLFLCK-KTTRGRVYHVCNILTKDWIKLPLPPPPGTGHNKRDRVLEGFVCEPYY 176

Query: 372 CFSESTS--------YKVVRIPWFEAPTKE---------FKVEMFSSDVGEWNVHHVSCP 500
              EST         ++VVR P FE    E         F++ +FSS+ G+W+  +VSCP
Sbjct: 177 SIGESTKKVSFNHHRFRVVRFPCFEGTISEILWGITKSEFEMVVFSSETGQWSKKNVSCP 236

Query: 501 LGATWELAYFVNY-VAHNGVFYWFQK 575
            G ++     + Y VAH  + Y+  K
Sbjct: 237 NGLSFTRPAILPYVVAHENILYFMGK 262


>ref|NP_189037.1| F-box protein [Arabidopsis thaliana]
           gi|75273448|sp|Q9LIR3.1|FB181_ARATH RecName:
           Full=Putative F-box protein At3g23950
           gi|9294663|dbj|BAB03012.1| unnamed protein product
           [Arabidopsis thaliana] gi|332643315|gb|AEE76836.1| F-box
           protein [Arabidopsis thaliana]
          Length = 418

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
 Frame = +3

Query: 177 FLHQVVDRGLYLLSSSNGLILCTIRLFYQTS-YYVCNPLTQKFVLIPLPPGNEYGKTVTG 353
           F  +   R L +L+ ++GL+L  +     T  YYV NPL Q++  IPL P  +Y      
Sbjct: 88  FFAETTIRKLQVLACTDGLVLLYVESCVGTPMYYVGNPLFQEWFRIPLRP--KYTSQNVE 145

Query: 354 FICNDECFSES-----------TSYKVVRIPWFEAPT-KEFKVEMFSSDVGEWNVHHVSC 497
            + N E FS+S            SYKVV   W  A T  +    ++SS+ GEW + +V+C
Sbjct: 146 KLRNHERFSDSGLVTKMQSGIVVSYKVV---WLIAHTFAQVDFAIYSSNTGEWEIKNVTC 202

Query: 498 PLGATWELAYFVNYVAHNGVFYW 566
              A W   +    +A NG+ +W
Sbjct: 203 LHSAYWFSHH--KSIALNGILHW 223


>ref|XP_002873126.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318963|gb|EFH49385.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 369

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
 Frame = +3

Query: 207 YLLSSSNGLILCTIRLFYQTSYYVCNPLTQKFVLIPLPPGNEYGKTVTGFICNDECFSES 386
           Y + SS+GL+LC     +  +YY+ +P TQK   +P P    + + +   +  ++C  + 
Sbjct: 124 YYIDSSDGLLLCGR---HPKAYYLWDPSTQKQQQLPRP--RVHFEELCMSLITEDCPDKG 178

Query: 387 TSYKVVRIPW--FEAPTKEFKVEMFSSDVGEWNVHHVSCPLG---ATWELAYFVNYVAHN 551
            SYKV+R     F A + + KVE FSS    W+   +SCP     + W L   +      
Sbjct: 179 FSYKVIRAECVGFIAQSTKLKVETFSSKTSTWSYSELSCPEPISLSPWTLGRVI-----K 233

Query: 552 GVFYW 566
           GV YW
Sbjct: 234 GVVYW 238


>ref|XP_002310219.1| predicted protein [Populus trichocarpa] gi|222853122|gb|EEE90669.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 43/133 (32%), Positives = 61/133 (45%)
 Frame = +3

Query: 168 SFRFLHQVVDRGLYLLSSSNGLILCTIRLFYQTSYYVCNPLTQKFVLIPLPPGNEYGKTV 347
           S +FL + VD    +  SSNGL+ C  R  YQ +YY+CNP+TQK+  +P P  N      
Sbjct: 97  SLKFLPEPVD----IRCSSNGLLCCQGRTGYQ-AYYICNPVTQKWKKLPEPTANHGTDPA 151

Query: 348 TGFICNDECFSESTSYKVVRIPWFEAPTKEFKVEMFSSDVGEWNVHHVSCPLGATWELAY 527
              +      +    YK+V    F +    F+ E++SS  G W +       G    L  
Sbjct: 152 VVLVFEPSLLNFVAEYKLVVA--FASDLDGFEFEIYSSTDGFWRI-SAEISFGKMKLLPR 208

Query: 528 FVNYVAHNGVFYW 566
              +V  NGV YW
Sbjct: 209 TGVHV--NGVVYW 219


>ref|XP_002872473.1| hypothetical protein ARALYDRAFT_911262 [Arabidopsis lyrata subsp.
           lyrata] gi|297318310|gb|EFH48732.1| hypothetical protein
           ARALYDRAFT_911262 [Arabidopsis lyrata subsp. lyrata]
          Length = 416

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 53/216 (24%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
 Frame = +3

Query: 21  KWYNLNNSLLPWGFLHNVYEQEDSNSTSIILFSYPDLH------SRFISDLQ-------- 158
           +W +L  S     F +++Y Q  SNSTS    ++P LH      + ++ ++Q        
Sbjct: 29  EWKSLTES----AFFNDLY-QSISNSTSS---NWPILHGSYRCTTSYLEEVQLNLPREPW 80

Query: 159 --NGFSFRFLHQVVDR---------GLYLLSSSNGLIL-CTIRLFYQTSYYVCNPLTQKF 302
             N  ++ F   V+ +          +++++ ++GL+L C +       YY+ NP+ Q++
Sbjct: 81  HGNSHNWSFTSGVIRKYTQNNNKIKEIWVVACADGLVLLCLLDEDMTKRYYIGNPMLQQW 140

Query: 303 VLIPLPPG-NEYGKTVTGFICNDECFSESTSYKVVRIPWFEAP----TKEFKVEMFSSDV 467
           + +  PP   +Y   +   +          SYKV+R+ + EA     ++ +  +++SS++
Sbjct: 141 IQLSPPPYLTQYHFFIDSGLVTRMHNGALLSYKVIRV-YSEARHLDVSRTWTFQIYSSEM 199

Query: 468 GEWNVHHVSCPLGATWELAYFVNYVAHNGVFYWFQK 575
           G+W+V HVSCP     +     N V+ NG  +WF +
Sbjct: 200 GKWSVQHVSCPGDGVSQQT--SNPVSLNGKLHWFHE 233


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