BLASTX nr result
ID: Papaver23_contig00034216
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver23_contig00034216 (574 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266... 185 5e-45 ref|XP_004134396.1| PREDICTED: DNA mismatch repair protein MSH1,... 182 3e-44 gb|ACA35268.1| DNA mismatch repair protein [Cucumis sativus] 182 3e-44 ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|2... 174 9e-42 ref|XP_004170676.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 172 3e-41 >ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266612 [Vitis vinifera] Length = 1144 Score = 185 bits (469), Expect = 5e-45 Identities = 106/196 (54%), Positives = 128/196 (65%), Gaps = 5/196 (2%) Frame = +1 Query: 1 IQRAGELYLSLNGKDLSVQRNSMKVQH----QNFNSDKEWINE-AEDRSSTLKPLNCKSE 165 I+RA ELYLS++ KDL RN ++ H N+ E N+ + T+ P K E Sbjct: 938 IRRAEELYLSIHSKDLLSGRNETELGHFCLDTTVNTSGEVYNQLSRITGGTICP---KIE 994 Query: 166 TLNPTETLQKEVATAVAIICQQKLIELCRDRNLSEPAELMCTTIATREQPPPSVIGSSCV 345 + N E L K+V +AV I+CQ+KL EL + +N S+ E+ C I EQPPPS IG+S V Sbjct: 995 STNEMEVLHKKVESAVTIVCQKKLKELYKQKNTSKLPEINCVAILPGEQPPPSTIGASSV 1054 Query: 346 YVLFRPDGKLYVGETDDLGGRVRAHRSKGGMQNVSFIYIEVPGKSFATLLETNLIHQLPN 525 YVLF D KLYVGETDDL GRVRAHRSK GMQ SF+Y VPGKS A LET LI+QLP Sbjct: 1055 YVLFSTDKKLYVGETDDLEGRVRAHRSKEGMQKASFLYFVVPGKSLACQLETLLINQLPV 1114 Query: 526 YGFRLSNVADGKHRNF 573 GF+L N ADGKHRNF Sbjct: 1115 QGFQLVNRADGKHRNF 1130 >ref|XP_004134396.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like [Cucumis sativus] Length = 1122 Score = 182 bits (463), Expect = 3e-44 Identities = 96/197 (48%), Positives = 131/197 (66%), Gaps = 6/197 (3%) Frame = +1 Query: 1 IQRAGELYLS------LNGKDLSVQRNSMKVQHQNFNSDKEWINEAEDRSSTLKPLNCKS 162 IQRA +LYLS ++GK+ + N H + N + + + +K K+ Sbjct: 913 IQRAEDLYLSNYAKEGISGKE-TTDLNFFVSSHPSLNGNGTGKSNLKSNGVIVKADQPKT 971 Query: 163 ETLNPTETLQKEVATAVAIICQQKLIELCRDRNLSEPAELMCTTIATREQPPPSVIGSSC 342 ET + T L K++ A+ ICQ+KLIE RD+N PAE+ C I RE+PPPS IG+S Sbjct: 972 ETTSKTGVLWKKLERAITKICQKKLIEFHRDKNTLTPAEIQCVLIDAREKPPPSTIGASS 1031 Query: 343 VYVLFRPDGKLYVGETDDLGGRVRAHRSKGGMQNVSFIYIEVPGKSFATLLETNLIHQLP 522 VYV+ RPDGK YVG+TDDL GRV++HR K GM++ +F+Y+ VPGKS A LET LI++LP Sbjct: 1032 VYVILRPDGKFYVGQTDDLDGRVQSHRLKEGMRDAAFLYLMVPGKSLACQLETLLINRLP 1091 Query: 523 NYGFRLSNVADGKHRNF 573 ++GF+L+NVADGKHRNF Sbjct: 1092 DHGFQLTNVADGKHRNF 1108 >gb|ACA35268.1| DNA mismatch repair protein [Cucumis sativus] Length = 1227 Score = 182 bits (463), Expect = 3e-44 Identities = 96/197 (48%), Positives = 131/197 (66%), Gaps = 6/197 (3%) Frame = +1 Query: 1 IQRAGELYLS------LNGKDLSVQRNSMKVQHQNFNSDKEWINEAEDRSSTLKPLNCKS 162 IQRA +LYLS ++GK+ + N H + N + + + +K K+ Sbjct: 1018 IQRAEDLYLSNYAKEGISGKE-TTDLNFFVSSHPSLNGNGTGKSNLKSNGVIVKADQPKT 1076 Query: 163 ETLNPTETLQKEVATAVAIICQQKLIELCRDRNLSEPAELMCTTIATREQPPPSVIGSSC 342 ET + T L K++ A+ ICQ+KLIE RD+N PAE+ C I RE+PPPS IG+S Sbjct: 1077 ETTSKTGVLWKKLERAITKICQKKLIEFHRDKNTLTPAEIQCVLIDAREKPPPSTIGASS 1136 Query: 343 VYVLFRPDGKLYVGETDDLGGRVRAHRSKGGMQNVSFIYIEVPGKSFATLLETNLIHQLP 522 VYV+ RPDGK YVG+TDDL GRV++HR K GM++ +F+Y+ VPGKS A LET LI++LP Sbjct: 1137 VYVILRPDGKFYVGQTDDLDGRVQSHRLKEGMRDAAFLYLMVPGKSLACQLETLLINRLP 1196 Query: 523 NYGFRLSNVADGKHRNF 573 ++GF+L+NVADGKHRNF Sbjct: 1197 DHGFQLTNVADGKHRNF 1213 >ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|222863550|gb|EEF00681.1| predicted protein [Populus trichocarpa] Length = 1130 Score = 174 bits (441), Expect = 9e-42 Identities = 92/191 (48%), Positives = 122/191 (63%) Frame = +1 Query: 1 IQRAGELYLSLNGKDLSVQRNSMKVQHQNFNSDKEWINEAEDRSSTLKPLNCKSETLNPT 180 IQRA +LY S K S R +D + + + +++L P ++ ++ Sbjct: 938 IQRAEDLYFSAYAKGFSSDR---------IVNDSDEAHLSSGTTASLHPSTHSTKAVDTV 988 Query: 181 ETLQKEVATAVAIICQQKLIELCRDRNLSEPAELMCTTIATREQPPPSVIGSSCVYVLFR 360 E +K++ A+ +ICQ+KLIEL + +N SE C I REQPPPS I +SCVYV+ R Sbjct: 989 E--KKDIENAITMICQKKLIELYKQKNTSEVVSFHCVAIGAREQPPPSTISASCVYVMLR 1046 Query: 361 PDGKLYVGETDDLGGRVRAHRSKGGMQNVSFIYIEVPGKSFATLLETNLIHQLPNYGFRL 540 PD KLYVG TDDL R+R+HRSK GM N +F+Y VPGKS A LLET LI+QLP GF+L Sbjct: 1047 PDKKLYVGVTDDLESRIRSHRSKEGMDNAAFLYFIVPGKSIACLLETLLINQLPIKGFKL 1106 Query: 541 SNVADGKHRNF 573 +NV+DGKHRNF Sbjct: 1107 TNVSDGKHRNF 1117 >ref|XP_004170676.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH1, mitochondrial-like, partial [Cucumis sativus] Length = 675 Score = 172 bits (437), Expect = 3e-41 Identities = 82/139 (58%), Positives = 107/139 (76%) Frame = +1 Query: 157 KSETLNPTETLQKEVATAVAIICQQKLIELCRDRNLSEPAELMCTTIATREQPPPSVIGS 336 K+ET + T L K++ A+ ICQ+KLIE RD+N PAE+ C I RE+PPPS IG+ Sbjct: 523 KTETTSKTGVLWKKLERAITKICQKKLIEFHRDKNTLTPAEIQCVLIDAREKPPPSTIGA 582 Query: 337 SCVYVLFRPDGKLYVGETDDLGGRVRAHRSKGGMQNVSFIYIEVPGKSFATLLETNLIHQ 516 S VYV+ RPDGK YVG+TDDL GRV++HR K GM++ +F+Y+ VPGKS A LET LI++ Sbjct: 583 SSVYVILRPDGKFYVGQTDDLDGRVQSHRLKEGMRDAAFLYLMVPGKSLACQLETLLINR 642 Query: 517 LPNYGFRLSNVADGKHRNF 573 LP++GF+L+NVADGKHRNF Sbjct: 643 LPDHGFQLTNVADGKHRNF 661