BLASTX nr result

ID: Papaver23_contig00034212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034212
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   189   5e-46
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   182   5e-44
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   182   8e-44
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   179   4e-43
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   178   9e-43

>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  189 bits (480), Expect = 5e-46
 Identities = 92/245 (37%), Positives = 152/245 (62%), Gaps = 1/245 (0%)
 Frame = +1

Query: 1    KSTRLTHLYFADDVMVFFKGTLEAATVLKCGLERFSACSGLEVNVKKTSLFCSGVSIEEK 180
            ++  LTHL FADD+MVF  GT ++        E+F+A S L+++++K+++F +G+S   K
Sbjct: 841  RNMNLTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAK 900

Query: 181  TLLLCCLGCSEGTLPVTYLGIPLISTRISYTNCLPLLERVIKKVHSWKTKFLAYPGRLLL 360
            T +L       GTLPV YLG+PL++ R++ ++ LPL+E++  ++ SW  +FL++ GRL L
Sbjct: 901  TSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQL 960

Query: 361  IKVVLCGMVYL*FDCFILPKRVVKELNTIFKRFLWAGAGLEKKHNPISWDNVCTSRSAGG 540
            IK VL  +       F LPK  ++E+  +F  FLW+G  L  K   I+W  VC  +  GG
Sbjct: 961  IKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGG 1020

Query: 541  LDVKKLQLINVAANLRHIWDLISGKETIWTVWVQENLIKHKDFWTMNTPQDC-SWSWRKL 717
            L +K L+  N  + L+ IW ++S ++++W  WV ++LI+ + FW++       SW WRK+
Sbjct: 1021 LGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKENTGLGSWLWRKI 1080

Query: 718  LEHRE 732
            L+ R+
Sbjct: 1081 LKQRD 1085


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  182 bits (463), Expect = 5e-44
 Identities = 90/245 (36%), Positives = 146/245 (59%), Gaps = 1/245 (0%)
 Frame = +1

Query: 1    KSTRLTHLYFADDVMVFFKGTLEAATVLKCGLERFSACSGLEVNVKKTSLFCSGVSIEEK 180
            K+  LTHL FADD+MV   G + +   +    + F+  SGL ++++K++++ +G+S   +
Sbjct: 694  KTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATAR 753

Query: 181  TLLLCCLGCSEGTLPVTYLGIPLISTRISYTNCLPLLERVIKKVHSWKTKFLAYPGRLLL 360
              +      S G LPV YLG+PLI+ R+S T+CLPLLE+V K++ SW ++FL+Y GRL L
Sbjct: 754  NEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNL 813

Query: 361  IKVVLCGMVYL*FDCFILPKRVVKELNTIFKRFLWAGAGLEKKHNPISWDNVCTSRSAGG 540
            I  VL  +       F LP++ ++EL  +   FLW+G  +      ISW  VC  +  GG
Sbjct: 814  ISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGG 873

Query: 541  LDVKKLQLINVAANLRHIWDLISGKETIWTVWVQENLIKHKDFWTM-NTPQDCSWSWRKL 717
            L ++ L+  N    L+ +W ++S   ++W  WV ++L+++  FW +  T    SW W+KL
Sbjct: 874  LGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKL 933

Query: 718  LEHRE 732
            L++RE
Sbjct: 934  LKYRE 938


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  182 bits (461), Expect = 8e-44
 Identities = 86/245 (35%), Positives = 149/245 (60%), Gaps = 1/245 (0%)
 Frame = +1

Query: 1    KSTRLTHLYFADDVMVFFKGTLEAATVLKCGLERFSACSGLEVNVKKTSLFCSGVSIEEK 180
            K+  LTHL FADD+M+   G + +   +   L +F+A  GL++ ++KT+L+ +GVS   +
Sbjct: 415  KTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGVSDHSR 474

Query: 181  TLLLCCLGCSEGTLPVTYLGIPLISTRISYTNCLPLLERVIKKVHSWKTKFLAYPGRLLL 360
             L+        G LPV YLG+PL++ R++ ++  PL++++ +++  W +++L++ GRL L
Sbjct: 475  QLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLSL 534

Query: 361  IKVVLCGMVYL*FDCFILPKRVVKELNTIFKRFLWAGAGLEKKHNPISWDNVCTSRSAGG 540
            I  VL  +     + F LP+  + E+N I    LW+G  L  K   +SWD +C  +  GG
Sbjct: 535  INSVLWSITNFWMNAFRLPRECINEINRISSALLWSGPELNPKKAKVSWDEICKPKKEGG 594

Query: 541  LDVKKLQLINVAANLRHIWDLISGKETIWTVWVQENLIKHKDFWTMNTPQDC-SWSWRKL 717
            L ++ L+  N  ++L+ IW L+S ++++W  W + NL+K + FW++ T     SW WR+L
Sbjct: 595  LGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSIGTHSTLGSWIWRRL 654

Query: 718  LEHRE 732
            L+HRE
Sbjct: 655  LKHRE 659


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  179 bits (455), Expect = 4e-43
 Identities = 86/246 (34%), Positives = 149/246 (60%), Gaps = 2/246 (0%)
 Frame = +1

Query: 1   KSTRLTHLYFADDVMVFFKGTLEAATVLKCGLERFSACSGLEVNVKKTSLFCSGVSIEEK 180
           K+  LTHL FADD+M+   G + +   +   +  F+  SGL++N++KT+L+ +GVS   +
Sbjct: 99  KNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNLFAKRSGLQINMEKTTLYTAGVSDHNR 158

Query: 181 TLLLCCLGCSEGTLPVTYLGIPLISTRISYTNCLPLLERVIKKVHSWKTKFLAYPGRLLL 360
            +++       G LPV YLG+PL++ R++  +  PL E++  ++ +W +++L++ GRL L
Sbjct: 159 YMMISRYPFGLGQLPVRYLGLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLSFAGRLNL 218

Query: 361 IKVVLCGMVYL*FDCFILPKRVVKELNTIFKRFLWAGAGLEKKHNPISWDNVCTSRSAGG 540
           I  VL   +      F LP   +KE+N+I   FLW+G  L ++   +SWD++C  +  GG
Sbjct: 219 ISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSGPELHRRKAKVSWDDICKPKQEGG 278

Query: 541 LDVKKLQLINVAANLRHIWDLISGKETIWTVWVQENLIKHKDFWTMNTPQDC--SWSWRK 714
           L ++ L   NV + L+ IW + S  +++W  W + NL+K + FW++ TP     SW W+K
Sbjct: 279 LGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSL-TPNSSLGSWMWKK 337

Query: 715 LLEHRE 732
           +L++RE
Sbjct: 338 MLKYRE 343


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  178 bits (452), Expect = 9e-43
 Identities = 83/218 (38%), Positives = 134/218 (61%), Gaps = 1/218 (0%)
 Frame = +1

Query: 79  VLKCGLERFSACSGLEVNVKKTSLFCSGVSIEEKTLLLCCLGCSEGTLPVTYLGIPLIST 258
           +++  L +F   SGL  N  K+ +F SGV   E+  ++  LG  EG LP+ YLG+PL+S+
Sbjct: 7   MIRTVLTKFQDLSGLYPNPNKSDIFLSGVLNAEREQIIHILGFREGELPMKYLGVPLLSS 66

Query: 259 RISYTNCLPLLERVIKKVHSWKTKFLAYPGRLLLIKVVLCGMVYL*FDCFILPKRVVKEL 438
           R+    C  L++R+  KV  W  + L+Y GR+ LI  VL  +       F+LP +V+K +
Sbjct: 67  RLKAIYCKGLVDRITSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNV 126

Query: 439 NTIFKRFLWAGAGLEKKHNPISWDNVCTSRSAGGLDVKKLQLINVAANLRHIWDLISGKE 618
             I K FLW+G+ +      ++WD VC  +  GGL +K ++  N  A L+HIW+L +  +
Sbjct: 127 EQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDSD 186

Query: 619 -TIWTVWVQENLIKHKDFWTMNTPQDCSWSWRKLLEHR 729
            +IW+ W++ NL++ ++FWT+ TPQ+CSW+W K+L+ R
Sbjct: 187 GSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLR 224


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