BLASTX nr result

ID: Papaver23_contig00034139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034139
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529315.1| DNA binding protein, putative [Ricinus commu...    79   5e-13
ref|XP_002271606.1| PREDICTED: putative DNA-binding protein ESCA...    76   3e-12
emb|CAN61523.1| hypothetical protein VITISV_016751 [Vitis vinifera]    76   3e-12
ref|XP_002284519.1| PREDICTED: putative DNA-binding protein ESCA...    75   4e-12
ref|XP_002314642.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>ref|XP_002529315.1| DNA binding protein, putative [Ricinus communis]
           gi|223531239|gb|EEF33084.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 301

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 52/110 (47%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
 Frame = -1

Query: 454 TLIASGPVMVIAATFGNATYERLPLEEAER--NNQQDHEEAXXXXXXXXXXGNSVPAVGS 281
           +LIA+GPVMVIAATF NATYERLPLE+ E   +  Q H +            NS P +GS
Sbjct: 206 SLIAAGPVMVIAATFANATYERLPLEDDEEAASAGQGHIQG--------GSNNSPPPIGS 257

Query: 280 SGSQQQQLPDLSTQMPVYXXXXXXXXXXXXXXXXXXNHDAYAWAHARPPF 131
           +G QQ  LPD S  +PVY                   HDAYAWAH RPP+
Sbjct: 258 TG-QQPGLPDPSA-LPVY-----NLPPNLIPNGGQLGHDAYAWAHGRPPY 300


>ref|XP_002271606.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
          Length = 291

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 48/108 (44%), Positives = 55/108 (50%)
 Frame = -1

Query: 454 TLIASGPVMVIAATFGNATYERLPLEEAERNNQQDHEEAXXXXXXXXXXGNSVPAVGSSG 275
           +LIA+GPVMVIAATF NATYERLPLE+ E       E+           G S P +G SG
Sbjct: 193 SLIAAGPVMVIAATFSNATYERLPLEDEEEAGSAAQEQ----LAGGGGGGGSPPGIGGSG 248

Query: 274 SQQQQLPDLSTQMPVYXXXXXXXXXXXXXXXXXXNHDAYAWAHARPPF 131
            QQQ      + MPVY                  NHDAY WAH R P+
Sbjct: 249 GQQQAGMADPSSMPVY-----NLPPNLLPNGGQLNHDAYGWAHGRQPY 291


>emb|CAN61523.1| hypothetical protein VITISV_016751 [Vitis vinifera]
          Length = 259

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 48/108 (44%), Positives = 55/108 (50%)
 Frame = -1

Query: 454 TLIASGPVMVIAATFGNATYERLPLEEAERNNQQDHEEAXXXXXXXXXXGNSVPAVGSSG 275
           +LIA+GPVMVIAATF NATYERLPLE+ E       E+           G S P +G SG
Sbjct: 161 SLIAAGPVMVIAATFSNATYERLPLEDEEEAGSAAQEQ----LAGGGGGGGSPPGIGGSG 216

Query: 274 SQQQQLPDLSTQMPVYXXXXXXXXXXXXXXXXXXNHDAYAWAHARPPF 131
            QQQ      + MPVY                  NHDAY WAH R P+
Sbjct: 217 GQQQAGMADPSSMPVY-----NLPPNLLPNGGQLNHDAYGWAHGRQPY 259


>ref|XP_002284519.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Vitis
           vinifera]
          Length = 260

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 47/109 (43%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
 Frame = -1

Query: 454 TLIASGPVMVIAATFGNATYERLPLEEAERNNQQDHEEAXXXXXXXXXXGNSVPAVGSSG 275
           +L+A+GPV+VIAATF NATYERLPLEE E   Q                  S PA+GSSG
Sbjct: 173 SLVAAGPVIVIAATFANATYERLPLEEEEEGGQ------------APPPSGSPPAIGSSG 220

Query: 274 SQQQQ-LPDLSTQMPVYXXXXXXXXXXXXXXXXXXNHDAYAWAHARPPF 131
            Q    LP+L    P+Y                  +HD Y+WAHARPP+
Sbjct: 221 GQHHSGLPEL----PIY-----NLPPNLLPNGGQLSHDPYSWAHARPPY 260


>ref|XP_002314642.1| predicted protein [Populus trichocarpa] gi|222863682|gb|EEF00813.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 54/109 (49%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
 Frame = -1

Query: 454 TLIASGPVMVIAATFGNATYERLPLEEAERNNQQDHEEAXXXXXXXXXXGNSVPAVGSSG 275
           +LIA+GPVMVIAATF NATYERLPLE        D EEA               A+GSSG
Sbjct: 126 SLIAAGPVMVIAATFANATYERLPLE--------DDEEAGSG------------AIGSSG 165

Query: 274 SQQQQLPDLSTQMPVYXXXXXXXXXXXXXXXXXXNHDAYAWAH-ARPPF 131
            QQ  LPD S+ MPVY                   HDAYAWAH ARPP+
Sbjct: 166 -QQAGLPDPSS-MPVY-----LPPNLMQSGAQQLGHDAYAWAHAARPPY 207


Top