BLASTX nr result

ID: Papaver23_contig00034112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034112
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-li...   195   3e-48
ref|XP_004142479.1| PREDICTED: retinoblastoma-related protein-li...   193   1e-47
ref|XP_002529988.1| conserved hypothetical protein [Ricinus comm...   192   3e-47
ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-...   187   1e-45
ref|XP_003522419.1| PREDICTED: retinoblastoma-related protein 1-...   186   1e-45

>ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
          Length = 1125

 Score =  195 bits (496), Expect = 3e-48
 Identities = 104/166 (62%), Positives = 120/166 (72%), Gaps = 6/166 (3%)
 Frame = -2

Query: 482  ASPINCNFLGDNVGVAATPVSTAMATAKWLQTVXXXXXXXXXXXXXXXXXSAGKEVFNHV 303
            AS  N      N  +AATPVSTAM TAKWL+TV                 S  ++V N V
Sbjct: 504  ASHANGTLNSGNTKIAATPVSTAMTTAKWLRTVISPLPAKPSVEMERFLASCDRDVTNDV 563

Query: 302  IRRAHIILRAIFPGNT------SDNTQSANVMDSVWAEERRVEALKLYYRVLEAMCRVEA 141
            +RRAHIIL AIFP         + N QSA++MD++WAE+RR+EALKLYYRVLEAMCR E+
Sbjct: 564  VRRAHIILEAIFPNTALGERCIAGNLQSASLMDNIWAEQRRLEALKLYYRVLEAMCRAES 623

Query: 140  QILHVSNLSSLLTNERFHRCMLACSAELVLATHKTVIMLFPAVLER 3
            Q+LHV+NL+SLLTNERFHRCMLACSAELVLATHKTV MLFPAVLER
Sbjct: 624  QMLHVTNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLER 669


>ref|XP_004142479.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
          Length = 1024

 Score =  193 bits (491), Expect = 1e-47
 Identities = 103/166 (62%), Positives = 120/166 (72%), Gaps = 6/166 (3%)
 Frame = -2

Query: 482 ASPINCNFLGDNVGVAATPVSTAMATAKWLQTVXXXXXXXXXXXXXXXXXSAGKEVFNHV 303
           AS  N      N  +AATPVSTAM TAKWL+TV                 S  ++V N V
Sbjct: 403 ASHANGTLNSGNTKIAATPVSTAMTTAKWLRTVISPLPAKPSVEMERFLASCDRDVTNDV 462

Query: 302 IRRAHIILRAIFPGNT------SDNTQSANVMDSVWAEERRVEALKLYYRVLEAMCRVEA 141
           +RRAHIIL AIFP         + + QSA++MD++WAE+RR+EALKLYYRVLEAMCR E+
Sbjct: 463 VRRAHIILEAIFPNTALGERCIAGSLQSASLMDNIWAEQRRLEALKLYYRVLEAMCRAES 522

Query: 140 QILHVSNLSSLLTNERFHRCMLACSAELVLATHKTVIMLFPAVLER 3
           Q+LHV+NL+SLLTNERFHRCMLACSAELVLATHKTV MLFPAVLER
Sbjct: 523 QMLHVTNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLER 568


>ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis]
           gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName:
           Full=Retinoblastoma-related protein
           gi|223530511|gb|EEF32393.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1020

 Score =  192 bits (487), Expect = 3e-47
 Identities = 102/155 (65%), Positives = 115/155 (74%), Gaps = 6/155 (3%)
 Frame = -2

Query: 449 NVGVAATPVSTAMATAKWLQTVXXXXXXXXXXXXXXXXXSAGKEVFNHVIRRAHIILRAI 270
           N  +AATPVSTAM TAKWL+TV                 S  ++V N VIRRAHIIL AI
Sbjct: 409 NSRMAATPVSTAMTTAKWLRTVISPLPSKPSPQLERFLASCDRDVTNDVIRRAHIILEAI 468

Query: 269 FPGNT------SDNTQSANVMDSVWAEERRVEALKLYYRVLEAMCRVEAQILHVSNLSSL 108
           FP N       + + QS N+MD++WAE+RR+EALKLYYRVLEAMC  EAQILH +NL+SL
Sbjct: 469 FPSNALGERCVTGSLQSTNLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQILHATNLTSL 528

Query: 107 LTNERFHRCMLACSAELVLATHKTVIMLFPAVLER 3
           LTNERFHRCMLACSAELVLATHKTV MLFPAVLER
Sbjct: 529 LTNERFHRCMLACSAELVLATHKTVTMLFPAVLER 563


>ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
          Length = 1002

 Score =  187 bits (474), Expect = 1e-45
 Identities = 98/155 (63%), Positives = 116/155 (74%), Gaps = 6/155 (3%)
 Frame = -2

Query: 449 NVGVAATPVSTAMATAKWLQTVXXXXXXXXXXXXXXXXXSAGKEVFNHVIRRAHIILRAI 270
           N  +AATPVSTAM TAKWL+TV                 S  ++V + V+RRA IIL+AI
Sbjct: 398 NSKMAATPVSTAMTTAKWLRTVISPLPSKPSPELERFLTSCDRDVTSDVVRRAQIILQAI 457

Query: 269 FPGN------TSDNTQSANVMDSVWAEERRVEALKLYYRVLEAMCRVEAQILHVSNLSSL 108
           FP +       + + QSAN+MD++WAE+RR+EALKLYYRVLEAMCR EAQ+ H +NL+SL
Sbjct: 458 FPSSPLGERCVTGSLQSANLMDNIWAEQRRLEALKLYYRVLEAMCRAEAQVFHATNLTSL 517

Query: 107 LTNERFHRCMLACSAELVLATHKTVIMLFPAVLER 3
           LTNERFHRCMLACSAELVLATHKTV MLFPAVLER
Sbjct: 518 LTNERFHRCMLACSAELVLATHKTVTMLFPAVLER 552


>ref|XP_003522419.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
          Length = 1014

 Score =  186 bits (473), Expect = 1e-45
 Identities = 98/155 (63%), Positives = 116/155 (74%), Gaps = 6/155 (3%)
 Frame = -2

Query: 449 NVGVAATPVSTAMATAKWLQTVXXXXXXXXXXXXXXXXXSAGKEVFNHVIRRAHIILRAI 270
           N  +AATPVSTAM TAKWL+TV                 S  ++  + V+RRA IIL+AI
Sbjct: 408 NSKMAATPVSTAMTTAKWLRTVISPLPSKPSPELERFLTSCDRDATSDVVRRAQIILQAI 467

Query: 269 FPGN------TSDNTQSANVMDSVWAEERRVEALKLYYRVLEAMCRVEAQILHVSNLSSL 108
           FP +       + + QSANV+D++WAE+RR+EALKLYYRVLEAMCR EAQ+LH +NL+SL
Sbjct: 468 FPSSPLGERCVTGSLQSANVVDNIWAEQRRLEALKLYYRVLEAMCRAEAQVLHATNLTSL 527

Query: 107 LTNERFHRCMLACSAELVLATHKTVIMLFPAVLER 3
           LTNERFHRCMLACSAELVLATHKTV MLFPAVLER
Sbjct: 528 LTNERFHRCMLACSAELVLATHKTVTMLFPAVLER 562


Top