BLASTX nr result
ID: Papaver23_contig00033981
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00033981
(751 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 72 9e-18
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g... 63 8e-15
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo... 63 8e-15
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 57 4e-14
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 58 4e-14
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 71.6 bits (174), Expect(3) = 9e-18
Identities = 37/80 (46%), Positives = 44/80 (55%)
Frame = -1
Query: 469 LAKLAWQLLHNQDAPWAKVLKGFSLLYHDLQFHRPPKSTNSSWIWKSICFGLEIVLKYAK 290
LAK AW+L N A WA+VL+ L Y F PK N SWIW S+ G + K A
Sbjct: 1474 LAKQAWRLHQNPFALWARVLE--QLYYPRSSFLEAPKGPNPSWIWNSLLIGRNFIHKEAL 1531
Query: 289 WQVGNKTQVNIWTSNWIPSM 230
W +GN VNI NWIPS+
Sbjct: 1532 WNIGNGFSVNIVGDNWIPSI 1551
Score = 36.2 bits (82), Expect(3) = 9e-18
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 180 VSQLIDSDSAQWNVSLLRQLFTPNQVNSILTIPL-QLDEPDKLIFPYTTILAYS 22
V +LI+ D+ W + + TP Q I IP+ L PD LI+PYT YS
Sbjct: 1567 VCELINWDTKSWELDHFAETITPTQRLLISAIPITSLAAPDTLIWPYTKDGVYS 1620
Score = 28.1 bits (61), Expect(3) = 9e-18
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -2
Query: 546 SWNTMQLPKRLGGLGLKQLDNYN 478
SW+ + PK+ GG+G + L+++N
Sbjct: 1448 SWDFLARPKKDGGMGFRNLEDFN 1470
>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
Japonica Group]
Length = 1453
Score = 62.8 bits (151), Expect(2) = 8e-15
Identities = 33/87 (37%), Positives = 45/87 (51%)
Frame = -1
Query: 493 IRQLQLGFLAKLAWQLLHNQDAPWAKVLKGFSLLYHDLQFHRPPKSTNSSWIWKSICFGL 314
I L LAK W+L+ N ++ A+VLK + Y K N S+ W+SIC GL
Sbjct: 989 IHAFNLAMLAKQGWRLIQNPESLCAQVLK--AKYYPSGNIFSAKKCANMSYTWRSICRGL 1046
Query: 313 EIVLKYAKWQVGNKTQVNIWTSNWIPS 233
+ W+VGN +NIW+ WIPS
Sbjct: 1047 LTLRDGMIWRVGNGAAINIWSDPWIPS 1073
Score = 43.5 bits (101), Expect(2) = 8e-15
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = -2
Query: 180 VSQLIDSDSAQWNVSLLRQLFTPNQVNSILTIPLQLDEPDKLIFPY 43
V +LID + W+V LL Q F P VN I TIP+ ++ D L + Y
Sbjct: 1091 VEELIDPSTGSWDVELLTQTFWPEDVNMIRTIPVHIEMDDMLAWHY 1136
>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
Length = 560
Score = 62.8 bits (151), Expect(2) = 8e-15
Identities = 33/87 (37%), Positives = 45/87 (51%)
Frame = -1
Query: 493 IRQLQLGFLAKLAWQLLHNQDAPWAKVLKGFSLLYHDLQFHRPPKSTNSSWIWKSICFGL 314
I L LAK W+L+ N ++ A+VLK + Y K N S+ W+SIC GL
Sbjct: 96 IHAFNLAMLAKQGWRLIQNPESLCAQVLK--AKYYPSGNIFSAKKCANMSYTWRSICRGL 153
Query: 313 EIVLKYAKWQVGNKTQVNIWTSNWIPS 233
+ W+VGN +NIW+ WIPS
Sbjct: 154 LTLRDGMIWRVGNGAAINIWSDPWIPS 180
Score = 43.5 bits (101), Expect(2) = 8e-15
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = -2
Query: 180 VSQLIDSDSAQWNVSLLRQLFTPNQVNSILTIPLQLDEPDKLIFPY 43
V +LID + W+V LL Q F P VN I TIP+ ++ D L + Y
Sbjct: 198 VEELIDPSTGSWDVELLTQTFWPEDVNMIRTIPVHIEMDDMLAWHY 243
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 56.6 bits (135), Expect(3) = 4e-14
Identities = 27/81 (33%), Positives = 47/81 (58%)
Frame = -1
Query: 478 LGFLAKLAWQLLHNQDAPWAKVLKGFSLLYHDLQFHRPPKSTNSSWIWKSICFGLEIVLK 299
L LAK W+L+ + D+ ++VL+ D RP +++N S+ W+SI GL ++
Sbjct: 1092 LAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDC--FRPKQTSNVSYTWRSIQKGLRVLQN 1149
Query: 298 YAKWQVGNKTQVNIWTSNWIP 236
W++G+ +++NIW WIP
Sbjct: 1150 GMIWRMGDGSKINIWADPWIP 1170
Score = 36.6 bits (83), Expect(3) = 4e-14
Identities = 34/131 (25%), Positives = 47/131 (35%), Gaps = 40/131 (30%)
Frame = -2
Query: 747 GLLKGILGMNRMGLGEKYLGIPLLLHRSR------------------------------- 661
G + L M R EKYLG+P+ + RSR
Sbjct: 962 GAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEIL 1021
Query: 660 -KQNSQGVQT--PGLNTLTNG*NSE------KY*RHNYTNHRSPRLISWNTMQLPKRLGG 508
K +Q + T G LT + KY N +SWN + LPK +GG
Sbjct: 1022 IKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGG 1081
Query: 507 LGLKQLDNYNL 475
LG + + +NL
Sbjct: 1082 LGFRDIYIFNL 1092
Score = 30.4 bits (67), Expect(3) = 4e-14
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -2
Query: 180 VSQLIDSDSAQWNVSLLRQLFTPNQVNSILTIPLQLDEPDKLIFPY 43
V +LID + W+ LL Q F V +I +IP+ ++ D L + +
Sbjct: 1189 VEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAWHF 1234
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 57.8 bits (138), Expect(3) = 4e-14
Identities = 28/81 (34%), Positives = 47/81 (58%)
Frame = -1
Query: 478 LGFLAKLAWQLLHNQDAPWAKVLKGFSLLYHDLQFHRPPKSTNSSWIWKSICFGLEIVLK 299
L LAK W+L+ + D+ ++VL+ D RP +++N S+ W+SI GL ++
Sbjct: 1064 LAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDC--FRPKQTSNVSYTWRSIQKGLRVLQN 1121
Query: 298 YAKWQVGNKTQVNIWTSNWIP 236
W+VG+ +++NIW WIP
Sbjct: 1122 GMIWRVGDGSKINIWADPWIP 1142
Score = 35.4 bits (80), Expect(3) = 4e-14
Identities = 34/131 (25%), Positives = 46/131 (35%), Gaps = 40/131 (30%)
Frame = -2
Query: 747 GLLKGILGMNRMGLGEKYLGIPLLLHRSRK-----------QNSQGVQTP---------- 631
G + L M R EKYLG+P+ + RSR Q QG +
Sbjct: 934 GAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEIL 993
Query: 630 -------------GLNTLTNG*NSE------KY*RHNYTNHRSPRLISWNTMQLPKRLGG 508
G LT + KY N +SWN + LPK +GG
Sbjct: 994 IKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGG 1053
Query: 507 LGLKQLDNYNL 475
LG + + +NL
Sbjct: 1054 LGFRDIYIFNL 1064
Score = 30.4 bits (67), Expect(3) = 4e-14
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -2
Query: 180 VSQLIDSDSAQWNVSLLRQLFTPNQVNSILTIPLQLDEPDKLIFPY 43
V +LID + W+ LL Q F V +I +IP+ ++ D L + +
Sbjct: 1161 VEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAWHF 1206