BLASTX nr result
ID: Papaver23_contig00033540
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00033540
(506 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arab... 91 3e-33
ref|XP_002511477.1| pentatricopeptide repeat-containing protein,... 87 6e-33
ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis... 91 1e-32
ref|XP_002322139.1| predicted protein [Populus trichocarpa] gi|2... 84 6e-32
ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containi... 95 7e-31
>ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata] gi|297334836|gb|EFH65254.1| hypothetical protein
ARALYDRAFT_476621 [Arabidopsis lyrata subsp. lyrata]
Length = 863
Score = 90.9 bits (224), Expect(3) = 3e-33
Identities = 48/80 (60%), Positives = 58/80 (72%), Gaps = 4/80 (5%)
Frame = -2
Query: 493 LEAYADAGSINETMGVFGQMQSAGCMPNAVTCSILLNLYGRNGLY----HIFLEIKVSNT 326
LEAYA +GSI E MGVF QMQ+AGC PNA T S+LLNL+G++G Y +FLE+K SNT
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT 383
Query: 325 EPDATNSYILIQVFLMSGSF 266
+PDA ILI+VF G F
Sbjct: 384 DPDAATYNILIEVFGEGGYF 403
Score = 59.3 bits (142), Expect(3) = 3e-33
Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Frame = -1
Query: 290 GFFDEWVIFRRLFHDMVEQINV*PDMET*-GSIFACGKGELHEDTKQILLHMT------- 135
G+F E V LFHDMVE+ N+ PDMET G IFACGKG LHED ++IL +MT
Sbjct: 401 GYFKEVVT---LFHDMVEE-NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPS 456
Query: 134 -KEFCQVLKRVQAYGQAA 84
K + V ++A+GQAA
Sbjct: 457 SKAYTGV---IEAFGQAA 471
Score = 37.0 bits (84), Expect(3) = 3e-33
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = -3
Query: 72 MHEVGSRATVETYNMLIHTFGRGG 1
MHEVGS ++ETY+ L+++F RGG
Sbjct: 483 MHEVGSNPSIETYHSLLYSFARGG 506
>ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550592|gb|EEF52079.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 754
Score = 87.4 bits (215), Expect(3) = 6e-33
Identities = 47/80 (58%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
Frame = -2
Query: 493 LEAYADAGSINETMGVFGQMQSAGCMPNAVTCSILLNLYGRNGLY----HIFLEIKVSNT 326
LEAYA G I MGVF QMQ A C+PNAVT S+LLNLYG +G Y +FLE+KVSNT
Sbjct: 325 LEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNT 384
Query: 325 EPDATNSYILIQVFLMSGSF 266
EPD +LI+VF G F
Sbjct: 385 EPDVGTYNVLIEVFGEGGYF 404
Score = 61.2 bits (147), Expect(3) = 6e-33
Identities = 42/78 (53%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Frame = -1
Query: 290 GFFDEWVIFRRLFHDMVEQINV*PDMET*-GSIFACGKGELHEDTKQILLHM-------- 138
G+F E V LFHDMVE+ NV P+M T G I+ACGKG LHED K+ILLHM
Sbjct: 402 GYFKEVVT---LFHDMVEE-NVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPS 457
Query: 137 TKEFCQVLKRVQAYGQAA 84
TK + V ++AYGQAA
Sbjct: 458 TKAYTGV---IEAYGQAA 472
Score = 37.7 bits (86), Expect(3) = 6e-33
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -3
Query: 84 IYVVMHEVGSRATVETYNMLIHTFGRGG 1
++ M+E+GS+ TVETYN LI+ F RGG
Sbjct: 480 MFNTMNEMGSKPTVETYNSLINMFARGG 507
>ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535
DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical
protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally
active 2 [Arabidopsis thaliana]
Length = 862
Score = 90.9 bits (224), Expect(3) = 1e-32
Identities = 48/80 (60%), Positives = 58/80 (72%), Gaps = 4/80 (5%)
Frame = -2
Query: 493 LEAYADAGSINETMGVFGQMQSAGCMPNAVTCSILLNLYGRNGLY----HIFLEIKVSNT 326
LEAYA +GSI E MGVF QMQ+AGC PNA T S+LLNL+G++G Y +FLE+K SNT
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT 383
Query: 325 EPDATNSYILIQVFLMSGSF 266
+PDA ILI+VF G F
Sbjct: 384 DPDAATYNILIEVFGEGGYF 403
Score = 59.3 bits (142), Expect(3) = 1e-32
Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Frame = -1
Query: 290 GFFDEWVIFRRLFHDMVEQINV*PDMET*-GSIFACGKGELHEDTKQILLHMT------- 135
G+F E V LFHDMVE+ N+ PDMET G IFACGKG LHED ++IL +MT
Sbjct: 401 GYFKEVVT---LFHDMVEE-NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPS 456
Query: 134 -KEFCQVLKRVQAYGQAA 84
K + V ++A+GQAA
Sbjct: 457 SKAYTGV---IEAFGQAA 471
Score = 35.4 bits (80), Expect(3) = 1e-32
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = -3
Query: 72 MHEVGSRATVETYNMLIHTFGRGG 1
MHEVGS ++ET++ L+++F RGG
Sbjct: 483 MHEVGSNPSIETFHSLLYSFARGG 506
>ref|XP_002322139.1| predicted protein [Populus trichocarpa] gi|222869135|gb|EEF06266.1|
predicted protein [Populus trichocarpa]
Length = 866
Score = 84.0 bits (206), Expect(3) = 6e-32
Identities = 46/80 (57%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
Frame = -2
Query: 493 LEAYADAGSINETMGVFGQMQSAGCMPNAVTCSILLNLYGRNGLY----HIFLEIKVSNT 326
LEAYA G+I + GVF MQ AGC+PNA T SILL LYG++G Y +FLE+KVSNT
Sbjct: 326 LEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNT 385
Query: 325 EPDATNSYILIQVFLMSGSF 266
EPDA LI VF G F
Sbjct: 386 EPDAATYNTLIDVFGEGGYF 405
Score = 61.6 bits (148), Expect(3) = 6e-32
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 6/75 (8%)
Frame = -1
Query: 290 GFFDEWVIFRRLFHDMVEQINV*PDMET*-GSIFACGKGELHEDTKQILLHMTKEFCQVL 114
G+F E V LFHDM E+ NV P+MET G IFACGKG LH+D K+ILLHM+++
Sbjct: 403 GYFKEVVT---LFHDMAEE-NVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPS 458
Query: 113 KR-----VQAYGQAA 84
+ ++AYGQAA
Sbjct: 459 SKAYTGVIEAYGQAA 473
Score = 37.4 bits (85), Expect(3) = 6e-32
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = -3
Query: 72 MHEVGSRATVETYNMLIHTFGRGG 1
M+E+GS+ T+ETYN LI+ F RGG
Sbjct: 485 MNEMGSKPTIETYNTLIYMFARGG 508
>ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 94.7 bits (234), Expect(2) = 7e-31
Identities = 51/80 (63%), Positives = 58/80 (72%), Gaps = 4/80 (5%)
Frame = -2
Query: 493 LEAYADAGSINETMGVFGQMQSAGCMPNAVTCSILLNLYGRNGLY----HIFLEIKVSNT 326
LEA+A +GSI E MGVF QMQ AGC+PNA T SILLNLYGR+G Y +FLE+KVSNT
Sbjct: 329 LEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNT 388
Query: 325 EPDATNSYILIQVFLMSGSF 266
EP+A ILI VF G F
Sbjct: 389 EPNAATYNILINVFGEGGYF 408
Score = 64.3 bits (155), Expect(2) = 7e-31
Identities = 41/75 (54%), Positives = 50/75 (66%), Gaps = 6/75 (8%)
Frame = -1
Query: 290 GFFDEWVIFRRLFHDMVEQINV*PDMET*-GSIFACGKGELHEDTKQILLHMTKEFCQVL 114
G+F E V LFHDMVE+ NV P+MET G IFACGKG LHED K+ILLHM ++
Sbjct: 406 GYFKEVVT---LFHDMVEE-NVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPS 461
Query: 113 KR-----VQAYGQAA 84
+ ++AYGQAA
Sbjct: 462 SKAYTGVIEAYGQAA 476