BLASTX nr result

ID: Papaver23_contig00033257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033257
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF82256.1|AC008051_7 Contains a F-box PF|00646 domain [Arabi...    57   2e-06
ref|NP_176127.1| F-box protein [Arabidopsis thaliana] gi|3740953...    57   2e-06
ref|NP_191479.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    57   2e-06
ref|XP_002876492.1| predicted protein [Arabidopsis lyrata subsp....    56   3e-06
ref|XP_002886719.1| predicted protein [Arabidopsis lyrata subsp....    56   3e-06

>gb|AAF82256.1|AC008051_7 Contains a F-box PF|00646 domain [Arabidopsis thaliana]
          Length = 482

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
 Frame = -2

Query: 382 ISFQRLKKLRLSFIEFKDKTLAM-QVFSNCPVLEDLYMTNVSWKGLDVICFALPQLKFFT 206
           +   +LK L +  ++F+   + + ++ S C +LE+L +  +SW   D +  +L  LK  T
Sbjct: 151 VHLPKLKTLHIVSVKFEKHGIGLNKLLSGCHILEELNLEYISWCLWDFVSVSLTTLKRLT 210

Query: 205 IRGFGRECIENVKVKFDTPNLLSLTWLDYIPEEFIVDSFPCLVEAGIRYNFPE 47
             G   +    + V F+TPNL+ L + D I +E+   +F  LVEA I     E
Sbjct: 211 FCGEVMQDENPISVSFNTPNLVYLMFTDAIADEYSTVNFDSLVEAHINLQMSE 263


>ref|NP_176127.1| F-box protein [Arabidopsis thaliana]
           gi|374095392|sp|Q9LQC1.2|FB65_ARATH RecName:
           Full=Putative F-box protein At1g58310
           gi|332195413|gb|AEE33534.1| F-box protein [Arabidopsis
           thaliana]
          Length = 505

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
 Frame = -2

Query: 382 ISFQRLKKLRLSFIEFKDKTLAM-QVFSNCPVLEDLYMTNVSWKGLDVICFALPQLKFFT 206
           +   +LK L +  ++F+   + + ++ S C +LE+L +  +SW   D +  +L  LK  T
Sbjct: 174 VHLPKLKTLHIVSVKFEKHGIGLNKLLSGCHILEELNLEYISWCLWDFVSVSLTTLKRLT 233

Query: 205 IRGFGRECIENVKVKFDTPNLLSLTWLDYIPEEFIVDSFPCLVEAGIRYNFPE 47
             G   +    + V F+TPNL+ L + D I +E+   +F  LVEA I     E
Sbjct: 234 FCGEVMQDENPISVSFNTPNLVYLMFTDAIADEYSTVNFDSLVEAHINLQMSE 286


>ref|NP_191479.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75264308|sp|Q9LX51.1|FBL64_ARATH RecName:
           Full=F-box/LRR-repeat protein At3g59200
           gi|7801670|emb|CAB91590.1| putative protein [Arabidopsis
           thaliana] gi|26450835|dbj|BAC42525.1| unknown protein
           [Arabidopsis thaliana] gi|29028916|gb|AAO64837.1|
           At3g59200 [Arabidopsis thaliana]
           gi|332646367|gb|AEE79888.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 520

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
 Frame = -2

Query: 370 RLKKLRLSFIEFKDKTLA-MQVFSNCPVLEDLYMTNVSWKGLDVICFALPQLKFFTIRGF 194
           +LK L +  ++ +++    +++ S CPVLE+L + N+ W+       ++  LK  T   F
Sbjct: 162 KLKTLYIDCVDVQERGFGFVKLLSGCPVLEELVLMNIGWENWKFCSVSVKTLKRLTF--F 219

Query: 193 GRECIENVK-VKFDTPNLLSLTWLDYIPEEFIVDSFPCLVEAGIRYNFPE 47
             E  EN K V FDTPNL+ L + D I  ++   +F  LVEA I     E
Sbjct: 220 CEETYENPKSVSFDTPNLVYLEYSDAIASKYPKVNFNSLVEAHIGLRLTE 269


>ref|XP_002876492.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322330|gb|EFH52751.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 478

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
 Frame = -2

Query: 370 RLKKLRLSFIEFKDKTLA-MQVFSNCPVLEDLYMTNVSWKGLDVICFALPQLKFFTIRGF 194
           +LK L +  +E +++    +++ S CPVLE+L + N+ W+       ++  LK  T   F
Sbjct: 167 KLKTLYIDSVEVQERGFGFVKLLSGCPVLEELVLMNIGWENWKFCSVSVKTLKRLTF--F 224

Query: 193 GRECIENVK-VKFDTPNLLSLTWLDYIPEEFIVDSFPCLVEAGIRYNFPE 47
             +  EN K V FDTPNL+ L + D I  ++   +F  LVEA I     E
Sbjct: 225 CEDSYENPKSVSFDTPNLVYLEYSDAIAGKYPKVNFNSLVEAHIGLRLTE 274


>ref|XP_002886719.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332560|gb|EFH62978.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 349

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
 Frame = -2

Query: 382 ISFQRLKKLRLSFIEFKDKTLAM-QVFSNCPVLEDLYMTNVSWKGLDVICFALPQLKFFT 206
           +   +LK L +  ++F+   + + ++ S C +LE+L +  +SW   + +  +   LK  T
Sbjct: 131 VHLPKLKTLHIESVKFEQHGIGLNKLLSGCHILEELILEYISWCLWEFVSVSSTTLKRLT 190

Query: 205 IRGFGRECIENVKVKFDTPNLLSLTWLDYIPEEFIVDSFPCLVEAGIRYNFPE 47
             G   +    + V FDTPNL+ L + D I +E+   +F  LVEA I     E
Sbjct: 191 FCGELMQDENPISVSFDTPNLVYLMFTDVIADEYSKVNFDSLVEAHINLQMSE 243


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