BLASTX nr result

ID: Papaver23_contig00033222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033222
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   124   1e-26
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...   124   1e-26
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   122   3e-26
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   116   3e-24
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   114   9e-24

>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  124 bits (311), Expect = 1e-26
 Identities = 62/179 (34%), Positives = 101/179 (56%)
 Frame = +3

Query: 15   IFSRLLTHLQHTKKVQGIKLTPKSTPISHLFFADNLLLFTKADLGSCTNLLEAIQTFSSS 194
            + SR++  +     +  + + P + P+SHLFFAD+ L F +A L +C  L + + T+  +
Sbjct: 1259 VLSRMINKMCQDSLLTPVTIGPNNLPVSHLFFADDSLFFLRATLQNCETLSDLLHTYCIA 1318

Query: 195  SCEVVNFEKSGIFFSKKVHKKHQGIICRLMKIKRINIKDTHLGVPLFIDRSNLRAFDNII 374
            S +++N EKS IFFS     +   ++  +M+I  ++   T+LG+P F  RS  +A   I 
Sbjct: 1319 SGQLINVEKSSIFFSPNTPPEIAHLLSSIMQIPVVSDPGTYLGLPTFWHRSKKKALGFIK 1378

Query: 375  EKIEHRIKLWLGKILSQPSKMVLNKAILSSMPIFSMGCFVLPKKITKRINNIQRDFLWG 551
            + I  ++K W    LSQ  K VL KA+ +++P + MGCF  P  + K +N I  DF WG
Sbjct: 1379 DSILRKVKGWKQATLSQAGKEVLIKAVATAIPAYPMGCFKFPSTLCKELNGILADFWWG 1437


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1229

 Score =  124 bits (311), Expect = 1e-26
 Identities = 60/183 (32%), Positives = 102/183 (55%)
 Frame = +3

Query: 15   IFSRLLTHLQHTKKVQGIKLTPKSTPISHLFFADNLLLFTKADLGSCTNLLEAIQTFSSS 194
            + S L T  Q  +++ G++++     ++HL FAD+ + F+K+D  SC  L E +  +  +
Sbjct: 545  VLSGLCTRAQRLRQLPGVRVSINGPRVNHLLFADDTMFFSKSDPESCNKLSEILSRYGKA 604

Query: 195  SCEVVNFEKSGIFFSKKVHKKHQGIICRLMKIKRINIKDTHLGVPLFIDRSNLRAFDNII 374
            S + +NF KS + FS K  +  +G + R++KI++      +LG+P    R     F  II
Sbjct: 605  SGQSINFHKSSVTFSSKTPRSVKGQVKRILKIRKEGGTGKYLGLPEHFGRRKRDIFGAII 664

Query: 375  EKIEHRIKLWLGKILSQPSKMVLNKAILSSMPIFSMGCFVLPKKITKRINNIQRDFLWGK 554
            +KI  +   W  + LSQ  K V+ KA+L+SMP++SM CF LP  + ++I ++   F W  
Sbjct: 665  DKIRQKSHSWASRFLSQAGKQVMLKAVLASMPLYSMSCFKLPSALCRKIQSLLTRFWWDT 724

Query: 555  HSD 563
              D
Sbjct: 725  KPD 727


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  122 bits (307), Expect = 3e-26
 Identities = 61/183 (33%), Positives = 105/183 (57%)
 Frame = +3

Query: 21   SRLLTHLQHTKKVQGIKLTPKSTPISHLFFADNLLLFTKADLGSCTNLLEAIQTFSSSSC 200
            S LL   +  K + G+K+  + +PISHLFFAD+ LLF +A      N+++ + T+ ++S 
Sbjct: 661  STLLRDAEEKKVIHGVKIGHRVSPISHLFFADDSLLFIRATEEEVENVMDILSTYEAASG 720

Query: 201  EVVNFEKSGIFFSKKVHKKHQGIICRLMKIKRINIKDTHLGVPLFIDRSNLRAFDNIIEK 380
            + +N EKS + +S+ +       +   +  K +   + +LG+P FI  S  R F  I ++
Sbjct: 721  QKLNMEKSEMSYSRNLEPDKINTLQMKLAFKTVEGHEKYLGLPTFIGSSKKRVFQAIQDR 780

Query: 381  IEHRIKLWLGKILSQPSKMVLNKAILSSMPIFSMGCFVLPKKITKRINNIQRDFLWGKHS 560
            +  ++K W GK LSQ  + VL KA+  ++P ++M CFV+PK I   I  + R+F WG+  
Sbjct: 781  VWKKLKGWKGKYLSQAGREVLIKAVAQAIPTYAMQCFVIPKSIIDGIEKMCRNFFWGQKE 840

Query: 561  DSQ 569
            + +
Sbjct: 841  EER 843


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  116 bits (290), Expect = 3e-24
 Identities = 58/178 (32%), Positives = 103/178 (57%)
 Frame = +3

Query: 18   FSRLLTHLQHTKKVQGIKLTPKSTPISHLFFADNLLLFTKADLGSCTNLLEAIQTFSSSS 197
            FS LL+     KK+ G ++   +  +SHLFFAD+ +LFTKA +  C+ + + I  +  +S
Sbjct: 654  FSTLLSKAASEKKIHGAQICRGAPVVSHLFFADDSILFTKASVQECSMVADIISKYERAS 713

Query: 198  CEVVNFEKSGIFFSKKVHKKHQGIICRLMKIKRINIKDTHLGVPLFIDRSNLRAFDNIIE 377
             + VN  K+ + FS+ V ++ +  I  ++ +K ++ ++ +LG+P  I RS    F  I E
Sbjct: 714  GQQVNLSKTEVVFSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTIIGRSKKVTFACIKE 773

Query: 378  KIEHRIKLWLGKILSQPSKMVLNKAILSSMPIFSMGCFVLPKKITKRINNIQRDFLWG 551
            +I  +++ W  K+LS+P K VL K++  ++P + M  F LP  +   I+++   F WG
Sbjct: 774  RIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSVFSLPSGLIDEIHSLLARFWWG 831


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  114 bits (286), Expect = 9e-24
 Identities = 56/184 (30%), Positives = 109/184 (59%)
 Frame = +3

Query: 18   FSRLLTHLQHTKKVQGIKLTPKSTPISHLFFADNLLLFTKADLGSCTNLLEAIQTFSSSS 197
            FS+++      K++ G K +     ISHLFFAD+ LLFT+A+   CT +++ +  +  +S
Sbjct: 655  FSKMIQRKVQDKQLHGAKASRSGPEISHLFFADDSLLFTRANRQECTIIVDILNQYELAS 714

Query: 198  CEVVNFEKSGIFFSKKVHKKHQGIICRLMKIKRINIKDTHLGVPLFIDRSNLRAFDNIIE 377
             + +N+EKS + +S+ V    +  +  ++ +++++  + +LG+P    RS    FD++I+
Sbjct: 715  GQKINYEKSEVSYSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSISGRSKKAIFDSLID 774

Query: 378  KIEHRIKLWLGKILSQPSKMVLNKAILSSMPIFSMGCFVLPKKITKRINNIQRDFLWGKH 557
            +I  +++ W  K+LS+  K VL K+++ ++P + MG +  P  I ++I +    F WG  
Sbjct: 775  RIWKKLQGWKEKLLSRAGKEVLLKSVIQAIPTYLMGVYKFPVFIIQKIQSAMARFWWGS- 833

Query: 558  SDSQ 569
            SD+Q
Sbjct: 834  SDTQ 837


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