BLASTX nr result

ID: Papaver23_contig00033062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033062
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyr...    63   7e-08
gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]    61   4e-07
ref|XP_002300156.1| predicted protein [Populus trichocarpa] gi|2...    60   5e-07
tpg|DAA51786.1| TPA: hypothetical protein ZEAMMB73_750935 [Zea m...    57   4e-06
ref|XP_003887131.1| topoisomerase IA [Encephalitozoon hellem ATC...    57   5e-06

>ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321433|gb|EFH51854.1| zinc knuckle family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 337

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 30/145 (20%)
 Frame = -3

Query: 562 IATGSTDMNRGRDNF--PVKEEDKS-----------STGSNTHQDSGSSSNQIENRRCDC 422
           + T +T  N GR  +  P +EE+             S+G+ TH    ++ ++  + +C C
Sbjct: 104 VLTSTTPKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTTTHSYGNTNDSKFPDHQCPC 163

Query: 421 DLP-CKIKMEKRGKFIGQLYHCCPLKRKSCGYFKWVDE----SKANY-----------DH 290
               C++   K G+ +G+ ++ CP+   SCG+FKW ++    S  +Y           D 
Sbjct: 164 GAGLCRVLTAKTGENVGRQFYRCPVFEGSCGFFKWCNDNAVSSPTSYSVTKNSNLGDSDT 223

Query: 289 MKYYCGR-GGSCISCVQDGHWAIDC 218
             Y   + G  C  C ++GHWA DC
Sbjct: 224 RGYQTAKTGAPCYKCGKEGHWARDC 248


>gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]
          Length = 369

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 29/144 (20%)
 Frame = -3

Query: 562 IATGSTDMNRGRDNF--PVKEE----------DKSSTGSNTHQDSGSSSNQIENRRCDCD 419
           I T +T  N GR  +  P +EE          D   +   TH    ++ ++  + +C C 
Sbjct: 101 ILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTTHSYGNTNDSKFPDHQCPCG 160

Query: 418 LP-CKIKMEKRGKFIGQLYHCCPLKRKSCGYFKWVDE---------------SKANYDHM 287
              C++   K G+ +G+ ++ CP+   SCG+FKW ++               +  + D  
Sbjct: 161 AGLCRVLTAKTGENVGRQFYRCPVFEGSCGFFKWCNDDAVSAPTSYSVTKNSNLGDSDTR 220

Query: 286 KYYCGRGGS-CISCVQDGHWAIDC 218
            Y   + G+ C  C ++GHWA DC
Sbjct: 221 GYQIAKTGTPCYKCGKEGHWARDC 244


>ref|XP_002300156.1| predicted protein [Populus trichocarpa] gi|222847414|gb|EEE84961.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 35/150 (23%)
 Frame = -3

Query: 562 IATGSTDMNRGRDNF--PVKEE----------DKSSTGSNTHQ-----DSGSSSNQI-EN 437
           + T +T+ NRGRD +  P ++E          D+S   +N          GS SN +   
Sbjct: 175 VFTANTERNRGRDFYKCPQRQESGGCGFFQWCDESPAANNGGGFGGGGSHGSVSNSVFPE 234

Query: 436 RRCDCDL-PCKIKMEKRGKFIGQLYHCCPLKRKSCGYFKWVDESKAN----------YDH 290
            +C C    C I   ++G   G+ ++ CP  +  CG+FKW D++ A+          Y +
Sbjct: 235 LQCSCGAGSCLILTSRKGDNNGKQFYKCPENQGGCGFFKWCDDNTASAGLQASAPKVYIN 294

Query: 289 M------KYYCGRGGSCISCVQDGHWAIDC 218
           M       +    G SC  C ++GHWA DC
Sbjct: 295 MNDSSNKSFGARTGSSCFKCGKEGHWAKDC 324


>tpg|DAA51786.1| TPA: hypothetical protein ZEAMMB73_750935 [Zea mays]
          Length = 369

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/96 (36%), Positives = 42/96 (43%), Gaps = 21/96 (21%)
 Frame = -3

Query: 430 CDCDL-PCKIKMEKRGKFIGQLYHCCPLKRK----SCGYFKWVDE----------SKANY 296
           C C    C I   K GK +G+ + CCPL +     SCG+FKW DE          + A Y
Sbjct: 211 CPCSAGTCLILTTKTGKNVGRQFFCCPLNQGGGGGSCGFFKWCDELQPRVGAPLQASAQY 270

Query: 295 --DHMKYYCG----RGGSCISCVQDGHWAIDCPRGP 206
             D M            SC  C Q+ HWA DCP  P
Sbjct: 271 QADSMPSIQNPSQRSSSSCFKCGQENHWARDCPNQP 306


>ref|XP_003887131.1| topoisomerase IA [Encephalitozoon hellem ATCC 50504]
           gi|392998289|gb|AFM98150.1| topoisomerase IA
           [Encephalitozoon hellem ATCC 50504]
          Length = 723

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = -3

Query: 514 VKEEDKSSTGSNTHQDSGSSSNQIENRRCDCDLPCKIKMEKRGKFIGQLYHCCPLKRKSC 335
           V+E   S T SN ++D G     I    CDC +  K+   K+G  +G+ ++CC    KSC
Sbjct: 612 VEESRSSGTKSNGNKDGG-----IRKMECDCKVEAKVLKVKKGDNVGREFYCCGKIPKSC 666

Query: 334 GYFKWVDESKANYD-HMKYYCG 272
            +F+W +  KA  D  +K +CG
Sbjct: 667 YFFQWCECEKAGEDKEIKCFCG 688


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