BLASTX nr result

ID: Papaver23_contig00033022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033022
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein ...   173   2e-41
ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein ...   161   8e-38
ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [...   160   1e-37
ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein ...   159   3e-37
ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago t...   150   2e-34

>ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|297739201|emb|CBI28852.3| unnamed protein
           product [Vitis vinifera]
          Length = 140

 Score =  173 bits (439), Expect = 2e-41
 Identities = 94/146 (64%), Positives = 106/146 (72%), Gaps = 1/146 (0%)
 Frame = +2

Query: 86  LVMFLVRKLTARNPTGNVRFFCAPPS-STPLANYDXXXXXXXXXXKLFVGGLSWGVDEKS 262
           LV    R LT +NP  + R FC+ PS  TP +N            KLFV GLSW VDEKS
Sbjct: 5   LVSLARRALTVQNPAADWRCFCSSPSFPTPPSN-----------TKLFVAGLSWSVDEKS 53

Query: 263 LTEAFSSFGNVTEVRIIYDKDSGRSRGFGFVHFSTNNDARSAKDAMDGKAFLGRPLRISF 442
           L +AFSSFG+VTEVRI+YDKDSGRSRGFGFV+FS   DARSAKDAMDGKAFLGRPLR+S+
Sbjct: 54  LKDAFSSFGDVTEVRIMYDKDSGRSRGFGFVYFSKEVDARSAKDAMDGKAFLGRPLRVSY 113

Query: 443 ALEKVRGGPVVVPRLSNVTDVSRRNN 520
           ALEKVRGGP+VVPR  N  D +   N
Sbjct: 114 ALEKVRGGPIVVPRRLNGGDDNNSRN 139


>ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Glycine max]
          Length = 137

 Score =  161 bits (407), Expect = 8e-38
 Identities = 84/129 (65%), Positives = 94/129 (72%)
 Frame = +2

Query: 125 PTGNVRFFCAPPSSTPLANYDXXXXXXXXXXKLFVGGLSWGVDEKSLTEAFSSFGNVTEV 304
           P    RF+C+PPS                  KLFVGGLSW VD KSL EAFSSFG+VTEV
Sbjct: 21  PQTQCRFYCSPPSHAS-------------SNKLFVGGLSWSVDHKSLKEAFSSFGDVTEV 67

Query: 305 RIIYDKDSGRSRGFGFVHFSTNNDARSAKDAMDGKAFLGRPLRISFALEKVRGGPVVVPR 484
            I+YDKDSGRSRGFGFV FS  +DA+ AKDAMDGKA LGRPLRI+FALEK RG PVVVPR
Sbjct: 68  TIVYDKDSGRSRGFGFVIFSNEDDAKCAKDAMDGKALLGRPLRINFALEKARGVPVVVPR 127

Query: 485 LSNVTDVSR 511
           LS++  V+R
Sbjct: 128 LSDIGHVNR 136


>ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 126

 Score =  160 bits (405), Expect = 1e-37
 Identities = 80/100 (80%), Positives = 87/100 (87%)
 Frame = +2

Query: 218 KLFVGGLSWGVDEKSLTEAFSSFGNVTEVRIIYDKDSGRSRGFGFVHFSTNNDARSAKDA 397
           KLFV GLSW VDEKSL +AFSSFG V+EVRI+YDKDSGRSRGFGFV+FS  N+A  AKDA
Sbjct: 26  KLFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSKENEAVCAKDA 85

Query: 398 MDGKAFLGRPLRISFALEKVRGGPVVVPRLSNVTDVSRRN 517
           MDGKA LGRPLRISFALEKVRGGP+VVPRLS+  D S RN
Sbjct: 86  MDGKALLGRPLRISFALEKVRGGPIVVPRLSSAGDNSNRN 125


>ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus] gi|449522522|ref|XP_004168275.1|
           PREDICTED: glycine-rich RNA-binding protein 2,
           mitochondrial-like [Cucumis sativus]
          Length = 145

 Score =  159 bits (402), Expect = 3e-37
 Identities = 90/149 (60%), Positives = 105/149 (70%), Gaps = 7/149 (4%)
 Frame = +2

Query: 92  MFLVRKLTA--RNPTGNVRFFCA----PPSSTPLANYDXXXXXXXXXXKLFVGGLSWGVD 253
           + L RK     + P    R FC+    P SS+P  N            KLFV GLSW +D
Sbjct: 8   LLLARKALTNIQTPFLGFRCFCSQSTSPLSSSPSPN-----------NKLFVAGLSWSMD 56

Query: 254 EKSLTEAFSSFGNVTEVRIIYDKDSGRSRGFGFVHFSTNNDARSAKDAMDGKAFLGRPLR 433
           E+SL +AFSSFG VTEVRI+YDKDSGRSRGFGFV+F+  NDA+ AKDAMDGKA LGRPLR
Sbjct: 57  ERSLKDAFSSFGEVTEVRIVYDKDSGRSRGFGFVNFANGNDAQCAKDAMDGKAVLGRPLR 116

Query: 434 ISFALEKVRGGPVVVPRLSNVTD-VSRRN 517
           ISFAL+KVRG PVVVPRLSN+ + V RR+
Sbjct: 117 ISFALDKVRGEPVVVPRLSNINNLVGRRS 145


>ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
           gi|355490432|gb|AES71635.1| Glycine-rich RNA-binding
           protein [Medicago truncatula]
          Length = 135

 Score =  150 bits (378), Expect = 2e-34
 Identities = 77/112 (68%), Positives = 87/112 (77%)
 Frame = +2

Query: 158 PSSTPLANYDXXXXXXXXXXKLFVGGLSWGVDEKSLTEAFSSFGNVTEVRIIYDKDSGRS 337
           PSS P   +           KLFVGGLSW VDEKSL +AFSSFG+VTEVRI+YDKDSGR+
Sbjct: 17  PSSHPQFRFFNSSSSSASSNKLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRA 76

Query: 338 RGFGFVHFSTNNDARSAKDAMDGKAFLGRPLRISFALEKVRGGPVVVPRLSN 493
           RGFGFV FS  + A+SAKDAMDGKA LGRPLRI+FALEK RG PVVVPR ++
Sbjct: 77  RGFGFVIFSNEDAAKSAKDAMDGKALLGRPLRINFALEKPRGIPVVVPRFTD 128


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