BLASTX nr result

ID: Papaver23_contig00033021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033021
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containi...    55   6e-06
ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containi...    55   6e-06
ref|XP_002518652.1| pentatricopeptide repeat-containing protein,...    55   6e-06

>ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
 Frame = +2

Query: 251 PNPTTTSAS-PFTPLLQEILLQNPNSTKTXXXXXXXXXXXXXXXXXXXXXXXTRLGKSGD 427
           P P  +SAS P  PLLQ++L     S+ T                       TR+G+S D
Sbjct: 43  PTPHLSSASSPLAPLLQDLLPHQHPSSSTQPHLPKPTFRTR-----------TRIGRSHD 91

Query: 428 RNRGKPWASEQLSVKGQQILETLISTE--SNDVTEIL 532
            NRGKPW+  +LS +GQ+IL++L++ E  S+ + EIL
Sbjct: 92  PNRGKPWSHHRLSTQGQRILDSLLNPEFDSSSLDEIL 128


>ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
 Frame = +2

Query: 251 PNPTTTSAS-PFTPLLQEILLQNPNSTKTXXXXXXXXXXXXXXXXXXXXXXXTRLGKSGD 427
           P P  +SAS P  PLLQ++L     S+ T                       TR+G+S D
Sbjct: 43  PTPHLSSASSPLAPLLQDLLPHQHPSSSTQPHLPKPTFRTR-----------TRIGRSHD 91

Query: 428 RNRGKPWASEQLSVKGQQILETLISTE--SNDVTEIL 532
            NRGKPW+  +LS +GQ+IL++L++ E  S+ + EIL
Sbjct: 92  PNRGKPWSHHRLSTQGQRILDSLLNPEFDSSSLDEIL 128


>ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542033|gb|EEF43577.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 827

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
 Frame = +2

Query: 260 TTTSASPFTPLLQEILLQN----PNSTKTXXXXXXXXXXXXXXXXXXXXXXXTRLGKSGD 427
           + TS+ PFTPL+Q +L+ +    P+S K                        TR+ K+ D
Sbjct: 38  SNTSSPPFTPLIQNMLINHHKIQPHSPK-------------FINPNVSIRPRTRISKARD 84

Query: 428 RNRGKPWASEQLSVKGQQILETLIST--ESNDVTEIL 532
            NRGKPWAS +LS  GQQ+L++LI    E +++ ++L
Sbjct: 85  PNRGKPWASHRLSTLGQQVLDSLIDPCFEGSELDKVL 121


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