BLASTX nr result

ID: Papaver23_contig00033012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033012
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...   309   3e-82
ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...   305   3e-81
emb|CBI18968.3| unnamed protein product [Vitis vinifera]              305   3e-81
ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...   280   1e-73
dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]                          276   2e-72

>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
            topbp1, putative [Ricinus communis]
          Length = 950

 Score =  309 bits (791), Expect = 3e-82
 Identities = 142/197 (72%), Positives = 169/197 (85%)
 Frame = -1

Query: 592  PLDRRAEIVEWIKQGGGDIVDGQSELNVNFTVECHGLVTKPGNVSQSQTTIVSTHWIRSC 413
            P DRRAEI+EW+ QGGG +V+  ++ NVNFT+ECHG +  P  +  SQTT VS+HW+RSC
Sbjct: 548  PADRRAEIIEWVSQGGGKMVEDHTKKNVNFTIECHGTI--PRCMGGSQTTYVSSHWVRSC 605

Query: 412  LEDACMPDVGSHIIYSPVPCKIPLPGFEAFRFCVSQYEEKDRLLLRNLCFVLGAKFTEKL 233
            LED  + DVG HIIYSP+PC+IPLPGFE FRFC+SQYEEKDRLLLRNLCFVLGAKF EKL
Sbjct: 606  LEDESLLDVGGHIIYSPLPCQIPLPGFENFRFCISQYEEKDRLLLRNLCFVLGAKFVEKL 665

Query: 232  SKKVTHLLCKFTNGPKYEAACKWGMQTVTSEWISECIRQNTVVSAHPFRPKEMTAQDREA 53
            ++KVTHLLCKFTNGPKYEAACKWG+ ++TSEWI EC+RQN VV+   FRPKE+T+QD+EA
Sbjct: 666  TRKVTHLLCKFTNGPKYEAACKWGICSITSEWIYECVRQNEVVALDRFRPKEVTSQDQEA 725

Query: 52   GLATMSQYTTQAARMIS 2
            GL T+SQ+ TQAARMIS
Sbjct: 726  GLCTVSQFPTQAARMIS 742


>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
            vinifera]
          Length = 962

 Score =  305 bits (782), Expect = 3e-81
 Identities = 145/197 (73%), Positives = 165/197 (83%)
 Frame = -1

Query: 592  PLDRRAEIVEWIKQGGGDIVDGQSELNVNFTVECHGLVTKPGNVSQSQTTIVSTHWIRSC 413
            P DRRAEIV+W+ QGGGD+VD   + NV+F VECHG +  P +V+ SQTT VS+HWIRSC
Sbjct: 556  PEDRRAEIVQWVNQGGGDVVDDWCKQNVHFVVECHGALL-PKSVNASQTTHVSSHWIRSC 614

Query: 412  LEDACMPDVGSHIIYSPVPCKIPLPGFEAFRFCVSQYEEKDRLLLRNLCFVLGAKFTEKL 233
            LED C+ DV SHI+YSP+PC+IPLPGFE  RFCVSQYEEKDRLLLRNLCFVLGAKF EKL
Sbjct: 615  LEDGCLLDVSSHILYSPLPCQIPLPGFEKLRFCVSQYEEKDRLLLRNLCFVLGAKFVEKL 674

Query: 232  SKKVTHLLCKFTNGPKYEAACKWGMQTVTSEWISECIRQNTVVSAHPFRPKEMTAQDREA 53
            +KKVTHLLCKFT GPKYEAACKWG++ VTSEWI ECI+QN VV    F PKE+TA DR+A
Sbjct: 675  TKKVTHLLCKFTGGPKYEAACKWGIKAVTSEWIYECIKQNGVVYVDSFCPKEITAHDRQA 734

Query: 52   GLATMSQYTTQAARMIS 2
            GL  MSQY TQAA+MIS
Sbjct: 735  GLCIMSQYPTQAAQMIS 751


>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score =  305 bits (782), Expect = 3e-81
 Identities = 145/197 (73%), Positives = 165/197 (83%)
 Frame = -1

Query: 592  PLDRRAEIVEWIKQGGGDIVDGQSELNVNFTVECHGLVTKPGNVSQSQTTIVSTHWIRSC 413
            P DRRAEIV+W+ QGGGD+VD   + NV+F VECHG +  P +V+ SQTT VS+HWIRSC
Sbjct: 556  PEDRRAEIVQWVNQGGGDVVDDWCKQNVHFVVECHGALL-PKSVNASQTTHVSSHWIRSC 614

Query: 412  LEDACMPDVGSHIIYSPVPCKIPLPGFEAFRFCVSQYEEKDRLLLRNLCFVLGAKFTEKL 233
            LED C+ DV SHI+YSP+PC+IPLPGFE  RFCVSQYEEKDRLLLRNLCFVLGAKF EKL
Sbjct: 615  LEDGCLLDVSSHILYSPLPCQIPLPGFEKLRFCVSQYEEKDRLLLRNLCFVLGAKFVEKL 674

Query: 232  SKKVTHLLCKFTNGPKYEAACKWGMQTVTSEWISECIRQNTVVSAHPFRPKEMTAQDREA 53
            +KKVTHLLCKFT GPKYEAACKWG++ VTSEWI ECI+QN VV    F PKE+TA DR+A
Sbjct: 675  TKKVTHLLCKFTGGPKYEAACKWGIKAVTSEWIYECIKQNGVVYVDSFCPKEITAHDRQA 734

Query: 52   GLATMSQYTTQAARMIS 2
            GL  MSQY TQAA+MIS
Sbjct: 735  GLCIMSQYPTQAAQMIS 751


>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine max]
          Length = 970

 Score =  280 bits (716), Expect = 1e-73
 Identities = 126/197 (63%), Positives = 162/197 (82%)
 Frame = -1

Query: 592  PLDRRAEIVEWIKQGGGDIVDGQSELNVNFTVECHGLVTKPGNVSQSQTTIVSTHWIRSC 413
            P ++R E+V+WI QGGG+I+ GQ++ +  +T+ECHG+   P     S++  +S+HWIRSC
Sbjct: 576  PEEKRGEVVQWITQGGGEIISGQTKQSTYYTIECHGVT--PTLTRDSKSLYISSHWIRSC 633

Query: 412  LEDACMPDVGSHIIYSPVPCKIPLPGFEAFRFCVSQYEEKDRLLLRNLCFVLGAKFTEKL 233
            LE   + DV SHI+YSP+PC++PLPGFE+FRFC SQY+EKDR LLRNLCF LGAK+ EKL
Sbjct: 634  LEAGSLLDVDSHILYSPLPCRVPLPGFESFRFCFSQYDEKDRNLLRNLCFHLGAKYGEKL 693

Query: 232  SKKVTHLLCKFTNGPKYEAACKWGMQTVTSEWISECIRQNTVVSAHPFRPKEMTAQDREA 53
            +KKVTHLLCKFTNGPKYEAACKWG+Q+VTSEWI EC++QN VV+   F PKE+TAQDR+A
Sbjct: 694  TKKVTHLLCKFTNGPKYEAACKWGIQSVTSEWIFECVKQNGVVAIDQFLPKEVTAQDRDA 753

Query: 52   GLATMSQYTTQAARMIS 2
            G+ T+SQ+ TQA +MIS
Sbjct: 754  GICTVSQFPTQAVQMIS 770



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
 Frame = -1

Query: 586 DRRAEIVEWIKQGGGDIVDGQSELNVNFTVECHGLVTK-PGNVSQSQTTIVSTHWIRSCL 410
           D + +I E + + GG ++  ++ L++NF V  + L  K    ++  +  IV+  W++ C 
Sbjct: 113 DEKVKIEELVAEMGG-VLHTKASLDLNFVVVKNVLAAKYKWALNILKKPIVTYEWLKQCS 171

Query: 409 EDACMPDVGSHIIYSPVPCKIPLPGFEAFRFCVSQYEEKDRLLLRNLCFVLGAKFTEKLS 230
           ++        H +      K+ LP F   + CV+     +R  +  L    G K++ +L+
Sbjct: 172 DE--------HRVVPQESYKV-LP-FSGLKICVTGIPADNRKEMEKLILQNGGKYSAELT 221

Query: 229 KKVTHLLCKFTNGPKYEAACKWG-MQTVTSEWISECIRQNTVVSAHPF 89
           KK THL+ +   G KY+ A +WG +  VT +W  + I +   ++   F
Sbjct: 222 KKCTHLISEAPEGDKYKVAKRWGHIHIVTRKWFDQSIARKACLNEELF 269


>dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]
          Length = 918

 Score =  276 bits (705), Expect = 2e-72
 Identities = 126/197 (63%), Positives = 158/197 (80%)
 Frame = -1

Query: 592  PLDRRAEIVEWIKQGGGDIVDGQSELNVNFTVECHGLVTKPGNVSQSQTTIVSTHWIRSC 413
            P DRRAEIV+W+ QGGG++++   + NV+FT+ECHG+   P +V   +TT VS+HW+ SC
Sbjct: 549  PEDRRAEIVQWVSQGGGEMLEDHVKENVHFTIECHGVT--PRSVDVPETTYVSSHWVHSC 606

Query: 412  LEDACMPDVGSHIIYSPVPCKIPLPGFEAFRFCVSQYEEKDRLLLRNLCFVLGAKFTEKL 233
            LED C+ DVG HIIYSP+PC+IP PGF  FRFC+SQYE KDR LLRNLCFVLGAKF EKL
Sbjct: 607  LEDKCLLDVGRHIIYSPLPCQIPFPGFRNFRFCISQYEGKDRSLLRNLCFVLGAKFVEKL 666

Query: 232  SKKVTHLLCKFTNGPKYEAACKWGMQTVTSEWISECIRQNTVVSAHPFRPKEMTAQDREA 53
            ++KVTHLLCKFT G KYEAAC+WG+  +TSEWI EC+R+N VV+   FRPK +T+QD+ A
Sbjct: 667  TRKVTHLLCKFTIGEKYEAACRWGICLITSEWIYECVRRNEVVAVDQFRPKVVTSQDQVA 726

Query: 52   GLATMSQYTTQAARMIS 2
            GL  +SQ+ TQ A+MIS
Sbjct: 727  GLCIVSQFPTQPAQMIS 743


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