BLASTX nr result

ID: Papaver23_contig00032066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032066
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77179.1| hypothetical protein VITISV_006672 [Vitis vinifera]    47   8e-08
emb|CAD39395.2| OSJNBb0089K24.5 [Oryza sativa Japonica Group]          49   3e-07
gb|ABA93462.1| retrotransposon protein, putative, Ty3-gypsy subc...    43   4e-06
gb|ABA96440.2| retrotransposon protein, putative, Ty3-gypsy subc...    43   4e-06
emb|CAN80324.1| hypothetical protein VITISV_015014 [Vitis vinifera]    57   5e-06

>emb|CAN77179.1| hypothetical protein VITISV_006672 [Vitis vinifera]
          Length = 311

 Score = 46.6 bits (109), Expect(2) = 8e-08
 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
 Frame = -1

Query: 283 ATALHHQTKGQSKWTTQILEYMF*ACAVDFNEN*NEQLSLV------GFPTSMECTWFYT 122
           +TA H QT GQS+   Q+LE +  AC +D   N ++ L LV       F  S+    F  
Sbjct: 64  STAFHPQTDGQSERVIQVLEDLLRACILDLQGNWDDHLPLVEFAYNNSFQASIGMLPFEA 123

Query: 121 ------KTMLC*AAVS*RSVLGPEVIRETTKKIKIIQGRL 20
                 ++ +C   V  R +LGPE+++   +K+ +I+ RL
Sbjct: 124 LYGRKCRSPICWNDVGERKLLGPELVQLIVEKVALIKERL 163



 Score = 35.8 bits (81), Expect(2) = 8e-08
 Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = -3

Query: 509 RRTIAVIVLRHLTCQQVEDEH**PAAPLQPLSIAV-E*VGIAVNFVMDLPK 360
           +  IA  V + L CQQV+ EH  PA  LQPL+I   +   I ++FV+ LP+
Sbjct: 2   KHDIAQFVAQCLVCQQVKAEHQRPAGSLQPLAIPEWKWEHITMDFVIGLPR 52


>emb|CAD39395.2| OSJNBb0089K24.5 [Oryza sativa Japonica Group]
          Length = 1365

 Score = 48.5 bits (114), Expect(2) = 3e-07
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
 Frame = -1

Query: 283  ATALHHQTKGQSKWTTQILEYMF*ACAVDFNEN*NEQLSLVGF------PTSMECTWFYT 122
            +TA H QT GQ++   QILE M  ACA+DF ++ ++ L    F        S++   F  
Sbjct: 1123 STAYHPQTDGQTERVNQILEDMLRACAMDFGKSWDKSLPYAEFSYNNSYQASLQMAPFEA 1182

Query: 121  ------KTMLC*AAVS*RSVLGPEVIRETTKKIKIIQGRL 20
                  +T L       R V G ++I+E  +K+K+IQ  L
Sbjct: 1183 LYGRKCRTPLLWDQTGERQVFGTDIIKEAEEKVKVIQANL 1222



 Score = 32.0 bits (71), Expect(2) = 3e-07
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = -3

Query: 578  YRIELDTMKVPEEKKFRLALRVARRTIAVIVLRHLTCQQVEDEH**PAAPLQPLSIAV-E 402
            Y I   + K+ ++ K +      +R IA  V     CQ+V+ EH  PA  LQPL I   +
Sbjct: 1010 YSIHPGSTKMYQDLKMKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLKIPEWK 1069

Query: 401  *VGIAVNFVMDLPK 360
               I ++F+  LP+
Sbjct: 1070 WEEIGMDFITGLPR 1083


>gb|ABA93462.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1687

 Score = 43.1 bits (100), Expect(2) = 4e-06
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
 Frame = -1

Query: 283  ATALHHQTKGQSKWTTQILEYMF*ACAVDFNEN*NEQLSLVGF------PTSMECTWFYT 122
            +TA H QT GQ++   QILE M  ACA+DF    ++ L    F        S++   F  
Sbjct: 1417 STAYHPQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSYNNSYQASLQMAPFEA 1476

Query: 121  ------KTMLC*AAVS*RSVLGPEVIRETTKKIKIIQGRL 20
                  +T L       R + G EV+ E  +K++II+ RL
Sbjct: 1477 LYGRKCRTPLFWDQTGERQLFGTEVLAEAEEKVRIIRERL 1516



 Score = 33.5 bits (75), Expect(2) = 4e-06
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = -3

Query: 578  YRIELDTMKVPEEKKFRLALRVARRTIAVIVLRHLTCQQVEDEH**PAAPLQPLSIAV-E 402
            Y I   + K+ ++ K +      RR IA  V     CQ+V+ EH  PA  LQPL I   +
Sbjct: 1312 YSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWK 1371

Query: 401  *VGIAVNFVMDLPKLS 354
               I ++F+  LP+ S
Sbjct: 1372 WEEIGMDFITGLPRTS 1387


>gb|ABA96440.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1652

 Score = 43.1 bits (100), Expect(2) = 4e-06
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
 Frame = -1

Query: 283  ATALHHQTKGQSKWTTQILEYMF*ACAVDFNEN*NEQLSLVGF------PTSMECTWFYT 122
            +TA H QT GQ++   QILE M  ACA+DF    ++ L    F        S++   F  
Sbjct: 1413 STAYHPQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSYNNSYQASLQMAPFEA 1472

Query: 121  ------KTMLC*AAVS*RSVLGPEVIRETTKKIKIIQGRL 20
                  +T L       R + G EV+ E  +K++II+ RL
Sbjct: 1473 LYGRKCRTPLFWDQTGERQLFGTEVLAEAEEKVRIIRERL 1512



 Score = 33.5 bits (75), Expect(2) = 4e-06
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = -3

Query: 578  YRIELDTMKVPEEKKFRLALRVARRTIAVIVLRHLTCQQVEDEH**PAAPLQPLSIAV-E 402
            Y I   + K+ ++ K +      RR IA  V     CQ+V+ EH  PA  LQPL I   +
Sbjct: 1308 YSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWK 1367

Query: 401  *VGIAVNFVMDLPKLS 354
               I ++F+  LP+ S
Sbjct: 1368 WEEIGMDFITGLPRTS 1383


>emb|CAN80324.1| hypothetical protein VITISV_015014 [Vitis vinifera]
          Length = 596

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
 Frame = -1

Query: 283 ATALHHQTKGQSKWTTQILEYMF*ACAVDFNEN*NEQLSLV------GFPTSMECTWFYT 122
           +TA H QT GQS+   Q+LE +F AC +D   N ++ L LV       F  S+  T F  
Sbjct: 328 STAFHPQTDGQSERVIQVLEDLFRACILDLQGNWDDHLPLVEFAYNNSFQASIGMTPFEA 387

Query: 121 ------KTMLC*AAVS*RSVLGPEVIRETTKKIKIIQGRLGTT 11
                 ++ +C   V  R +LGPE+++ T +K+ +I+ RL TT
Sbjct: 388 LYGRKCRSPICWNDVGERKLLGPELVQLTVEKVALIKERLKTT 430


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