BLASTX nr result

ID: Papaver23_contig00031101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00031101
         (777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    93   6e-17
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    81   2e-13
ref|NP_974590.1| F-box protein [Arabidopsis thaliana] gi|1222138...    80   4e-13
ref|NP_193959.2| F-box protein [Arabidopsis thaliana] gi|3326591...    80   4e-13
ref|XP_003571062.1| PREDICTED: F-box/LRR-repeat protein At4g1409...    80   4e-13

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 83/257 (32%), Positives = 125/257 (48%), Gaps = 14/257 (5%)
 Frame = +3

Query: 3   LSKRWRYTWTSLTTLNFNQE------------EGCSNIADFVNMVLMFRDSCRIQRFCLE 146
           LSKRWRY W S+  L+F+ E            E      +FV+ VL   +   I++F L 
Sbjct: 38  LSKRWRYLWASVPILDFDDELWLNPSTLVELEERIIMFQNFVDGVLRHSEVSCIKKFRLG 97

Query: 147 VYSDEVVNSTHIYSWIAAAVRRNVEELDISCVCNGDFVIPPCLCTCKSLKKLDLYVCGDE 326
            Y D  ++S  +YSWI  A+ R V+ELD+  + +    +PP    CK+L  + L      
Sbjct: 98  -YRDNNLDS--VYSWICIALERRVQELDLHLLIDWRVELPPMFFICKTLVVVKLSCALFL 154

Query: 327 DYPGKIVLPTSVSLPKLKSMSLNLEYLFFEDECSTNEFFSSCPALESLDLGGCTLRDMN- 503
           D      +PT+V LP LK  +L+L+ + + D+ S  +  S CP LE L +     RD   
Sbjct: 155 D------IPTTVWLPSLK--ALHLKSVEYSDDDSIQKLLSGCPVLEELVIER-EERDNQW 205

Query: 504 -LNISSLILERFGSTIYHDGSMHLDTSSFTGRPRLRLYAPNLTTLDHTRYELRDYSFGNL 680
            +N+S+  L+      + DG  H          ++ + APNL  L  T Y  +DY   +L
Sbjct: 206 VVNVSNPSLKILRIFFFTDGFAH-PYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKDL 264

Query: 681 SSLVSACIYLDVETDDK 731
            SLV A  ++DVE D +
Sbjct: 265 PSLVKA--FIDVEQDSE 279


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 6/154 (3%)
 Frame = +3

Query: 3   LSKRWRYTWTSLTTLNFNQEEGCSNIADFVN---MVLMFRDSCRIQRFCLEVYSDEVVNS 173
           LS++W + W SL+ L F+Q    +    F+N    VL+ RDS  I++F L    D+   +
Sbjct: 66  LSRKWEHLWKSLSNLEFHQCYFKAKRKIFMNSVERVLLLRDSSNIEKFTLSCGIDD---A 122

Query: 174 THIYSWIAAAVRRNVEELDISCVCNGD---FVIPPCLCTCKSLKKLDLYVCGDEDYPGKI 344
           T   +W++AAV RNV+EL ++    G+   FV P CL TC +L KL +         G +
Sbjct: 123 TRTRTWVSAAVNRNVKELCVNFYEGGESESFVSPLCLFTCATLTKLKI------TSHGVL 176

Query: 345 VLPTSVSLPKLKSMSLNLEYLFFEDECSTNEFFS 446
            L +S+SLP LK +S  L+++ F DE ST +  +
Sbjct: 177 RLSSSISLPCLKILS--LQHVVFPDEDSTQQILN 208


>ref|NP_974590.1| F-box protein [Arabidopsis thaliana]
           gi|122213848|sp|Q3E7K7.1|FB243_ARATH RecName: Full=F-box
           protein At4g22280 gi|115311447|gb|ABI93904.1| At4g22280
           [Arabidopsis thaliana] gi|332659186|gb|AEE84586.1| F-box
           protein [Arabidopsis thaliana]
          Length = 332

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 70/246 (28%), Positives = 113/246 (45%), Gaps = 5/246 (2%)
 Frame = +3

Query: 3   LSKRWRYTWTSLTTLNFNQEE--GCSNIADFVNMVLMFRDSCRIQRFCLEVYSDEVVNST 176
           LS RWRY +     L  + +E  G  +  DFV+ VL+   +  I+R  ++      +++ 
Sbjct: 30  LSMRWRYLFAFRPNLCLDDQEVGGGDSFIDFVDRVLVVTGNFPIRRISIKCRMS--IDTG 87

Query: 177 HIYSWIAAAVRRNVEELDISCVCNGDF-VIPPCLCTCKSLKKLDLYVCGDEDYPGKIVLP 353
           H+  W+   +   V  LDI  +   D   +P  + TCK+L +L L            ++P
Sbjct: 88  HVTRWMVDVLEHGVSYLDIDIISEDDIGFVPLEIFTCKTLVELKLA------RGFYAMVP 141

Query: 354 TSVSLPKLKSMSLNLEYLFFEDECSTNEFFSSCPALESLD-LGGCTLR-DMNLNISSLIL 527
             VSLP LK++ L+  +    D C      S+CP LE L  +GGC    +    +SS  L
Sbjct: 142 DYVSLPSLKTLFLSSIWFCNRDCCPLGRLLSACPVLEELTIIGGCWQHIEFCRTVSSSTL 201

Query: 528 ERFGSTIYHDGSMHLDTSSFTGRPRLRLYAPNLTTLDHTRYELRDYSFGNLSSLVSACIY 707
           ++   T     S H +    T      +  P+L  L+++    R + F NL SLV A + 
Sbjct: 202 KKLTIT----SSFHYEYWGIT------IDTPSLAYLEYSDLVPRHFPFVNLESLVEAKLA 251

Query: 708 LDVETD 725
           LD+ +D
Sbjct: 252 LDLCSD 257


>ref|NP_193959.2| F-box protein [Arabidopsis thaliana] gi|332659185|gb|AEE84585.1|
           F-box protein [Arabidopsis thaliana]
          Length = 415

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 70/246 (28%), Positives = 113/246 (45%), Gaps = 5/246 (2%)
 Frame = +3

Query: 3   LSKRWRYTWTSLTTLNFNQEE--GCSNIADFVNMVLMFRDSCRIQRFCLEVYSDEVVNST 176
           LS RWRY +     L  + +E  G  +  DFV+ VL+   +  I+R  ++      +++ 
Sbjct: 30  LSMRWRYLFAFRPNLCLDDQEVGGGDSFIDFVDRVLVVTGNFPIRRISIKCRMS--IDTG 87

Query: 177 HIYSWIAAAVRRNVEELDISCVCNGDF-VIPPCLCTCKSLKKLDLYVCGDEDYPGKIVLP 353
           H+  W+   +   V  LDI  +   D   +P  + TCK+L +L L            ++P
Sbjct: 88  HVTRWMVDVLEHGVSYLDIDIISEDDIGFVPLEIFTCKTLVELKLA------RGFYAMVP 141

Query: 354 TSVSLPKLKSMSLNLEYLFFEDECSTNEFFSSCPALESLD-LGGCTLR-DMNLNISSLIL 527
             VSLP LK++ L+  +    D C      S+CP LE L  +GGC    +    +SS  L
Sbjct: 142 DYVSLPSLKTLFLSSIWFCNRDCCPLGRLLSACPVLEELTIIGGCWQHIEFCRTVSSSTL 201

Query: 528 ERFGSTIYHDGSMHLDTSSFTGRPRLRLYAPNLTTLDHTRYELRDYSFGNLSSLVSACIY 707
           ++   T     S H +    T      +  P+L  L+++    R + F NL SLV A + 
Sbjct: 202 KKLTIT----SSFHYEYWGIT------IDTPSLAYLEYSDLVPRHFPFVNLESLVEAKLA 251

Query: 708 LDVETD 725
           LD+ +D
Sbjct: 252 LDLCSD 257


>ref|XP_003571062.1| PREDICTED: F-box/LRR-repeat protein At4g14096-like [Brachypodium
           distachyon]
          Length = 416

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 9/220 (4%)
 Frame = +3

Query: 3   LSKRWRYTWTSLTTLNFNQEEGCSNIADFVNMVLMFRDSCRIQRFCLEVYSDEVVNSTHI 182
           LS+RWR+ W S+ ++  ++    S   +F N++ + R+  ++  FCL    DE  +  + 
Sbjct: 41  LSRRWRHLWASMPSVTLDE----SVSREFGNLLFLLREDAKLHTFCLRSSDDEENDDENN 96

Query: 183 Y----SWIAAAVRRNVEELDISCVCNG-----DFVIPPCLCTCKSLKKLDLYVCGDEDYP 335
           +     W+   + R V  L I+   +       + +P C+  C +++ +DL V    +  
Sbjct: 97  FVYQRRWLRHVMSRGVRVLMITLHSSSYRGLSGWELPDCVFNCATVETIDLSVTSPWEL- 155

Query: 336 GKIVLPTSVSLPKLKSMSLNLEYLFFEDECSTNEFFSSCPALESLDLGGCTLRDMNLNIS 515
             ++ P SV LP+LK   L L+Y+   D     +  S CPALE LDL  C L    ++  
Sbjct: 156 --VISPKSVCLPRLKK--LRLDYVNLSDSSVVEKLNSGCPALEHLDLARCGLAQSRISSD 211

Query: 516 SLILERFGSTIYHDGSMHLDTSSFTGRPRLRLYAPNLTTL 635
           +L +    +  Y +               + ++APN+ +L
Sbjct: 212 TLKILSITACAYEE---------------IHIFAPNVVSL 236


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