BLASTX nr result

ID: Papaver23_contig00031092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00031092
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45737.1| unknown [Lotus japonicus] gi|388520851|gb|AFK4848...   107   1e-21
ref|XP_002521665.1| 30S ribosomal protein S17, putative [Ricinus...   105   3e-21
ref|XP_002331425.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
gb|AFK34780.1| unknown [Lotus japonicus]                              103   1e-20
gb|AFK44187.1| unknown [Lotus japonicus]                              102   4e-20

>gb|AFK45737.1| unknown [Lotus japonicus] gi|388520851|gb|AFK48487.1| unknown
           [Lotus japonicus]
          Length = 102

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/73 (67%), Positives = 59/73 (80%)
 Frame = -1

Query: 515 YNRYIKRTSKFMAHDEKDECNIGDRVRLDPSRPISKRKCWTVAEILKKAQIYVAPPVDPS 336
           YNRY+KRTSKFMAHDE + CNIGDRVRL+PSRP+SK KCW VAEILKKA+IYV P   P 
Sbjct: 30  YNRYVKRTSKFMAHDENNLCNIGDRVRLNPSRPLSKNKCWVVAEILKKARIYVPPTSTPV 89

Query: 335 TKNVKPTADSVAS 297
           ++ V  + ++ AS
Sbjct: 90  SEKVSSSTEAPAS 102


>ref|XP_002521665.1| 30S ribosomal protein S17, putative [Ricinus communis]
           gi|223539056|gb|EEF40652.1| 30S ribosomal protein S17,
           putative [Ricinus communis]
          Length = 92

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/63 (77%), Positives = 54/63 (85%)
 Frame = -1

Query: 515 YNRYIKRTSKFMAHDEKDECNIGDRVRLDPSRPISKRKCWTVAEILKKAQIYVAPPVDPS 336
           YNRY+KRTSKFMAHDE D CNIGDRVRLDPSRP+SKRK W VAEILKKA+IYV P  D +
Sbjct: 18  YNRYVKRTSKFMAHDENDLCNIGDRVRLDPSRPLSKRKHWVVAEILKKARIYVPPSADNT 77

Query: 335 TKN 327
           T +
Sbjct: 78  TSS 80


>ref|XP_002331425.1| predicted protein [Populus trichocarpa] gi|222873639|gb|EEF10770.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/76 (68%), Positives = 58/76 (76%), Gaps = 4/76 (5%)
 Frame = -1

Query: 515 YNRYIKRTSKFMAHDEKDECNIGDRVRLDPSRPISKRKCWTVAEILKKAQIYVAPPVDPS 336
           YNRY+KRTSKFMAHDE D CNIGDRVRLDPSRP+SKRK W VAEILKKA+IYV P    S
Sbjct: 30  YNRYVKRTSKFMAHDENDLCNIGDRVRLDPSRPLSKRKHWVVAEILKKARIYVPPSAGDS 89

Query: 335 ----TKNVKPTADSVA 300
               T  +K +A S +
Sbjct: 90  GASNTAGMKASASSTS 105


>gb|AFK34780.1| unknown [Lotus japonicus]
          Length = 96

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/64 (73%), Positives = 54/64 (84%)
 Frame = -1

Query: 515 YNRYIKRTSKFMAHDEKDECNIGDRVRLDPSRPISKRKCWTVAEILKKAQIYVAPPVDPS 336
           YNRY+KRTSKFMAHDE + CNIGDRVRL+PSRP+SK KCW VAEILKKA+IYV P   P 
Sbjct: 30  YNRYVKRTSKFMAHDENNLCNIGDRVRLNPSRPLSKNKCWVVAEILKKARIYVPPTSTPV 89

Query: 335 TKNV 324
           ++ V
Sbjct: 90  SEKV 93


>gb|AFK44187.1| unknown [Lotus japonicus]
          Length = 88

 Score =  102 bits (253), Expect = 4e-20
 Identities = 46/59 (77%), Positives = 51/59 (86%)
 Frame = -1

Query: 515 YNRYIKRTSKFMAHDEKDECNIGDRVRLDPSRPISKRKCWTVAEILKKAQIYVAPPVDP 339
           YNRY+KRTSKFMAHDE + CNIGDRVRL+PSRP+SK KCW VAEILKKA+IYV P   P
Sbjct: 30  YNRYVKRTSKFMAHDENNLCNIGDRVRLNPSRPLSKHKCWVVAEILKKARIYVPPTSTP 88


Top