BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00031072
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    82   2e-18
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    67   3e-15
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    76   4e-14
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]    62   3e-13
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta...    80   3e-13

>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score = 82.4 bits (202), Expect(2) = 2e-18
 Identities = 39/104 (37%), Positives = 58/104 (55%)
 Frame = -2

Query: 320 LGYDNFKCIPAIGRSGGSAILWNNDIDLEVINADKNVIHCRITQTIGQKWDLLCVYGPPE 141
           LGYD    +   GRSGG AI W + +++E + ADKN++  +++    + W + CVYG P 
Sbjct: 50  LGYDFIHTVEPEGRSGGLAIFWKSHLEIEFLYADKNLMDLQVSSR-NKVWFISCVYGLPV 108

Query: 140 HHLRNNFWAKFSQYTEHLSNPWCVFGDLNAIKYNSEKDGGIQRS 9
            H+R   W   +      +  WC+ GD N I+ N EK GG +RS
Sbjct: 109 THMRPKLWEHLNSIGLKRAEAWCLIGDFNDIRSNDEKLGGPRRS 152



 Score = 36.2 bits (82), Expect(2) = 2e-18
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = -3

Query: 463 IFSWNCRGLGNISTVRNLKAFLRAINPQLAFLTETLIGESNSHNF 329
           + SWNC+GL N  T+R LK   +   P + FL ET     NS +F
Sbjct: 2   VISWNCQGLRNPWTIRYLKEMKKDHFPDILFLMET----KNSQDF 42


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 66.6 bits (161), Expect(2) = 3e-15
 Identities = 32/106 (30%), Positives = 56/106 (52%)
 Frame = -2

Query: 320 LGYDNFKCIPAIGRSGGSAILWNNDIDLEVINADKNVIHCRITQTIGQKWDLLCVYGPPE 141
           LG+ +   +  IG+SGG A++W + + ++V+ +DK +I   +     +++ L C+YG P 
Sbjct: 51  LGFFDLHTVEPIGKSGGLALMWKDSVQIKVLQSDKRLIDALLIWQ-DKEFYLTCIYGEPV 109

Query: 140 HHLRNNFWAKFSQYTEHLSNPWCVFGDLNAIKYNSEKDGGIQRSNT 3
              R   W + ++     S PW + GD N +   SEK GG  R  +
Sbjct: 110 QAERGELWERLTRLGLSRSGPWMLTGDFNELVDPSEKIGGPARKES 155



 Score = 40.8 bits (94), Expect(2) = 3e-15
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = -3

Query: 469 MLIFSWNCRGLGNISTVRNLKAFLRAINPQLAFLTET 359
           M I SWNC+G+GN  TVR+L+       P++ FL ET
Sbjct: 1   MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCET 37


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
           Arabidopsis thaliana retrotransposon Ta11-1
           gi|976278|gb|AAA75254.1| reverse transcriptase
           [Arabidopsis thaliana]
          Length = 1333

 Score = 75.9 bits (185), Expect(2) = 4e-14
 Identities = 38/106 (35%), Positives = 59/106 (55%)
 Frame = -2

Query: 320 LGYDNFKCIPAIGRSGGSAILWNNDIDLEVINADKNVIHCRITQTIGQKWDLLCVYGPPE 141
           LGY+    +  IG SGG A+ W   +D+ +  ADKN+I  +I Q    ++ + CVYG P 
Sbjct: 53  LGYERVFTVNPIGLSGGLALFWKKGVDIVIKYADKNLIDFQI-QFGSHEFYVSCVYGNPA 111

Query: 140 HHLRNNFWAKFSQYTEHLSNPWCVFGDLNAIKYNSEKDGGIQRSNT 3
              ++  W K ++   +   PWC+ GD N I +N EK GG +R ++
Sbjct: 112 FSDKHLVWEKITRIGINRKEPWCMLGDFNPILHNGEKRGGPRRGDS 157



 Score = 27.7 bits (60), Expect(2) = 4e-14
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -3

Query: 469 MLIFSWNCRGLG--NISTVRNLKAFLRAINPQLAFLTET 359
           M + SWNC+GLG     T+  L     +  P++ FL ET
Sbjct: 1   MSLVSWNCQGLGWSQDLTIPRLMEMRLSHFPEVLFLMET 39


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score = 61.6 bits (148), Expect(2) = 3e-13
 Identities = 30/101 (29%), Positives = 46/101 (45%)
 Frame = -2

Query: 320 LGYDNFKCIPAIGRSGGSAILWNNDIDLEVINADKNVIHCRITQTIGQKWDLLCVYGPPE 141
           LG++   C+  +GR GG A LW       ++   ++ I   +++  G +W +   YG P+
Sbjct: 357 LGFEGAFCVDRVGRGGGLAFLWRKAGMFSLLXYSQSHIDMEVSEEDGLQWRVTGFYGFPD 416

Query: 140 HHLRNNFWAKFSQYTEHLSNPWCVFGDLNAIKYNSEKDGGI 18
              R+  W          S PWC  GD N I  N EK G +
Sbjct: 417 RSQRHLSWNLLRSLYSASSLPWCCLGDFNDIVCNEEKRGSV 457



 Score = 39.3 bits (90), Expect(2) = 3e-13
 Identities = 19/39 (48%), Positives = 23/39 (58%)
 Frame = -3

Query: 469 MLIFSWNCRGLGNISTVRNLKAFLRAINPQLAFLTETLI 353
           M+  SWNCRGLGN  TV  L    ++  P   FL ETL+
Sbjct: 307 MIGISWNCRGLGNPRTVLALCEINKSRKPDFIFLIETLV 345


>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1319

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
 Frame = -2

Query: 320 LGYDNFKCIPAIGRSGGSAILWNNDIDLEVINADKNVIHCRITQTIGQK-WDLLCVYGPP 144
           LGYD F  I  +G+SGG AI W N ++++ +  DKN++  +++Q  G+K W + CVYG P
Sbjct: 14  LGYDYFHTIEPVGKSGGLAIFWKNHLEIDFLFEDKNLLDLKVSQ--GKKSWFVSCVYGNP 71

Query: 143 EHHLRNNFWAKFSQYTEHLSNPWCVFGDLNAIKYNSEKDGGIQR 12
             HLR     K S      ++ WC+ GD N I  N  K GG  R
Sbjct: 72  VLHLRYLLLDKLSSIGVQRNSAWCMIGDFNDILSNDGKLGGPSR 115