BLASTX nr result

ID: Papaver23_contig00030471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00030471
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japo...    85   7e-15
ref|NP_001052463.1| Os04g0321600 [Oryza sativa Japonica Group] g...    85   7e-15
ref|XP_002330007.1| global transcription factor group [Populus t...    84   1e-14
ref|XP_002466155.1| hypothetical protein SORBIDRAFT_01g002390 [S...    84   2e-14
ref|NP_001105557.1| FACT complex subunit SPT16 [Zea mays] gi|752...    84   2e-14

>gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japonica Group]
          Length = 1056

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
 Frame = +3

Query: 6    IRLTGTILVKAGGQGGETIAGTLEAHATGFVYIASNVSRY--FYFDNITKSFFRLGDKRM 179
            +RL+   +  A G  G  + GTLE+H  GF Y  S         + N+  +FF+  +K M
Sbjct: 663  VRLSDVWIRPAFGGRGRKLTGTLESHVNGFRYSTSRADERVDIMYGNVKHAFFQPAEKEM 722

Query: 180  LPLLHFQLHDPIVVGTEKTKDIQF-----RLVHCSLGQDRSGHDSDMIEEGNLMSDEGR- 341
            + LLHF LH+ I+VG +KTKD+QF      +V    G  RS  D D IEE     D    
Sbjct: 723  ITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGNRRSALDPDEIEEEQRERDRKNR 782

Query: 342  -NEDLKSFVDKVRERWN 389
             N D ++FV+KV + W+
Sbjct: 783  INMDFQNFVNKVNDHWS 799


>ref|NP_001052463.1| Os04g0321600 [Oryza sativa Japonica Group]
            gi|75295962|sp|Q7X923.2|SPT16_ORYSJ RecName: Full=FACT
            complex subunit SPT16; AltName: Full=Facilitates
            chromatin transcription complex subunit SPT16
            gi|38346977|emb|CAD40293.2| OSJNBb0062H02.2 [Oryza sativa
            Japonica Group] gi|113564034|dbj|BAF14377.1| Os04g0321600
            [Oryza sativa Japonica Group]
            gi|215768327|dbj|BAH00556.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 1056

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
 Frame = +3

Query: 6    IRLTGTILVKAGGQGGETIAGTLEAHATGFVYIASNVSRY--FYFDNITKSFFRLGDKRM 179
            +RL+   +  A G  G  + GTLE+H  GF Y  S         + N+  +FF+  +K M
Sbjct: 663  VRLSDVWIRPAFGGRGRKLTGTLESHVNGFRYSTSRADERVDIMYGNVKHAFFQPAEKEM 722

Query: 180  LPLLHFQLHDPIVVGTEKTKDIQF-----RLVHCSLGQDRSGHDSDMIEEGNLMSDEGR- 341
            + LLHF LH+ I+VG +KTKD+QF      +V    G  RS  D D IEE     D    
Sbjct: 723  ITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGNRRSALDPDEIEEEQRERDRKNR 782

Query: 342  -NEDLKSFVDKVRERWN 389
             N D ++FV+KV + W+
Sbjct: 783  INMDFQNFVNKVNDHWS 799


>ref|XP_002330007.1| global transcription factor group [Populus trichocarpa]
            gi|222871432|gb|EEF08563.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1065

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 53/136 (38%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
 Frame = +3

Query: 6    IRLTGTILVKAGGQGGETIAGTLEAHATGFVYIASNVSRY--FYFDNITKSFFRLGDKRM 179
            IRLT   +    G  G  + G+LEAH  GF Y  S         F NI  +FF+  +K M
Sbjct: 675  IRLTDLWIRPVFGGRGRKLPGSLEAHVNGFRYSTSRAEERVDIMFANIKHAFFQPAEKEM 734

Query: 180  LPLLHFQLHDPIVVGTEKTKDIQF-----RLVHCSLGQDRSGHDSDMIEEGNLMSDEGR- 341
            + LLHF LH+ I+VG +KTKD+QF      +V    G  RS +D D IEE     +    
Sbjct: 735  ITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEIEEEQRERERKNK 794

Query: 342  -NEDLKSFVDKVRERW 386
             N D +SFV++V + W
Sbjct: 795  INMDFQSFVNRVNDLW 810


>ref|XP_002466155.1| hypothetical protein SORBIDRAFT_01g002390 [Sorghum bicolor]
            gi|241920009|gb|EER93153.1| hypothetical protein
            SORBIDRAFT_01g002390 [Sorghum bicolor]
          Length = 1054

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 53/138 (38%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
 Frame = +3

Query: 3    VIRLTGTILVKAGGQGGETIAGTLEAHATGFVYIASNVSRY--FYFDNITKSFFRLGDKR 176
            ++RL+   +  A G  G  + G LEAH  GF Y  S         F NI  +FF+  +K 
Sbjct: 661  MMRLSDVWIRPAFGGRGRKLTGNLEAHFNGFRYSTSRSDERVDIMFGNIKHAFFQPAEKE 720

Query: 177  MLPLLHFQLHDPIVVGTEKTKDIQF-----RLVHCSLGQDRSGHDSDMIEEGNLMSDEGR 341
            M+ LLHF LH+ I+VG +KTKD+QF      +V    G  RS  D D IEE     D   
Sbjct: 721  MITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGSRRSALDPDEIEEEQRERDRKN 780

Query: 342  --NEDLKSFVDKVRERWN 389
              N D ++FV+KV + W+
Sbjct: 781  RINMDFQNFVNKVNDHWS 798


>ref|NP_001105557.1| FACT complex subunit SPT16 [Zea mays]
            gi|75299841|sp|Q8H6B1.1|SPT16_MAIZE RecName: Full=FACT
            complex subunit SPT16; AltName: Full=Facilitates
            chromatin transcription complex subunit SPT16; AltName:
            Full=Global transcription factor group C protein 102
            gi|24021798|gb|AAN41252.1| global transcription factor
            group C 102 [Zea mays] gi|413935251|gb|AFW69802.1| FACT
            complex subunit SPT16 isoform 1 [Zea mays]
            gi|413935252|gb|AFW69803.1| FACT complex subunit SPT16
            isoform 2 [Zea mays]
          Length = 1055

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 53/138 (38%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
 Frame = +3

Query: 3    VIRLTGTILVKAGGQGGETIAGTLEAHATGFVYIASNVSRY--FYFDNITKSFFRLGDKR 176
            ++RL+   +  A G  G  + G LEAH  GF Y  S         F NI  +FF+  +K 
Sbjct: 662  MMRLSDVWIRPAFGGRGRKLTGNLEAHFNGFRYSTSRSDERVDIMFGNIKHAFFQPAEKE 721

Query: 177  MLPLLHFQLHDPIVVGTEKTKDIQF-----RLVHCSLGQDRSGHDSDMIEEGNLMSDEGR 341
            M+ LLHF LH+ I+VG +KTKD+QF      +V    G  RS  D D IEE     D   
Sbjct: 722  MITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGSRRSALDPDEIEEEQRERDRKN 781

Query: 342  --NEDLKSFVDKVRERWN 389
              N D ++FV+KV + W+
Sbjct: 782  RINMDFQNFVNKVNDHWS 799


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