BLASTX nr result

ID: Papaver23_contig00028395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00028395
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516806.1| conserved hypothetical protein [Ricinus comm...    82   5e-14
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    77   1e-12
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    75   6e-12
ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata sub...    71   8e-11
ref|XP_002870349.1| hypothetical protein ARALYDRAFT_915515 [Arab...    71   8e-11

>ref|XP_002516806.1| conserved hypothetical protein [Ricinus communis]
           gi|223543894|gb|EEF45420.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 403

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 57/155 (36%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
 Frame = +1

Query: 34  GSSNGLLCICCVNTYIDEDEAGCCLSDDDDVKEEQIFVLNPSTREFKKILVQRRVGERGK 213
           GS NGLLCI                       E+ +F+ NPSTRE KKIL +        
Sbjct: 159 GSCNGLLCIA--------------------PDEDSLFLFNPSTRESKKILEESN------ 192

Query: 214 MLRSLFWFGYDCKIDDYKVVRVVDFDRSGKESFEVEVYTLGSDSWKRIGNVSYKFEQHH- 390
              + F FGYD   DDYKVVR+     +G  S    VY+L +DSW++I N  + F  HH 
Sbjct: 193 -YVTAFGFGYDSTRDDYKVVRI----NAGVAS---SVYSLRTDSWRKIDNFCHDFCFHHS 244

Query: 391 GVLVSGALHWFAVSTVQ---QLKVLVSFDIVNERF 486
           GV + GA+HW A++  +   +  V+ +FD+  E F
Sbjct: 245 GVFLRGAIHWMAINREEVDDEYYVISAFDMEKELF 279


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 54/138 (39%), Positives = 71/138 (51%), Gaps = 9/138 (6%)
 Frame = +1

Query: 34  GSSNGLLCICCVNTYIDEDEAGCCLSDDDDVKEEQIFVLNPSTRE-----FKKILVQRRV 198
           GS NGLLCI  V                     + I V NPSTR+     F  I ++R  
Sbjct: 100 GSVNGLLCISNV--------------------VDDIAVWNPSTRKHRVVPFLPIELKRYF 139

Query: 199 GERGKMLRSLFWFGYDCKIDDYKVVRVVDFDRSGKESF--EVEVYTLGSDSWKRIGNVSY 372
           G +   +  +F FGYD   DDYK+VR+  F   GK SF  EV+VY+L   SW+RIG++ Y
Sbjct: 140 GTKSCSVY-VFGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMPY 198

Query: 373 --KFEQHHGVLVSGALHW 420
              +   +GV  +GALHW
Sbjct: 199 CVHYPGANGVFANGALHW 216


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
 Frame = +1

Query: 34  GSSNGLLCICCVNTYIDEDEAGCCLSDDDDVKEEQIFVLNPSTREFKKILVQRRVGERGK 213
           GS NGLLC+                   D + ++ ++V NP TR+FK++    +  ++  
Sbjct: 126 GSCNGLLCLA------------------DSLFKDAVYVHNPFTRDFKQLPKSLQYPDQ-- 165

Query: 214 MLRSLFWFGYDCKIDDYKVVRVVDFDRSGKESF-----------EVEVYTLGSDSWKRIG 360
               +F FGY    + YKVV+VV + R+G   F           EV+V TLGS +W+ +G
Sbjct: 166 --EVVFGFGYHPMTEVYKVVKVVYY-RNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSLG 222

Query: 361 NVSYKFEQHHG-VLVSGALHWFAVSTVQQLKVLVSFDIVNERF 486
            VSY+ ++     LV+G LHW         + +VSFD+ +E+F
Sbjct: 223 KVSYQLDRWPSEALVNGRLHWVTRPRRYVTRFIVSFDLADEQF 265


>ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328297|gb|EFH58716.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 427

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
 Frame = +1

Query: 34  GSSNGLLCICCVNTYIDEDEAGCCLSDDDDVKEEQIFVLNPSTREFKKI--LVQRRVGER 207
           GSSNGL+CI                       E  + + NP+T + K++   ++ +  E 
Sbjct: 167 GSSNGLVCI--------------------SPGEGAVILYNPTTGDSKRLPETLRPKSVEY 206

Query: 208 GKMLRSLFWFGYDCKIDDYKVVRVVDFDRSGKESFEVEVYTLGSDSWKRIGNVSYKFEQ- 384
           G+     + FG+D   DDYKVV++V    +  +  +  VY+L +DSW+RI N++Y+    
Sbjct: 207 GRDNFQTYGFGFDDLTDDYKVVKLV---ATSDDILDASVYSLKADSWRRICNLNYEHNDG 263

Query: 385 --HHGVLVSGALHWFAVSTVQQLKVLVSFDIVNERF 486
               GV  +GA+HW         +V+V+FDI  E F
Sbjct: 264 FYTSGVHFNGAIHWVFAEISHGQRVVVAFDIQTEEF 299


>ref|XP_002870349.1| hypothetical protein ARALYDRAFT_915515 [Arabidopsis lyrata subsp.
           lyrata] gi|297316185|gb|EFH46608.1| hypothetical protein
           ARALYDRAFT_915515 [Arabidopsis lyrata subsp. lyrata]
          Length = 405

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 55/158 (34%), Positives = 84/158 (53%), Gaps = 5/158 (3%)
 Frame = +1

Query: 28  FCGSSNGLLCICCVNTYIDEDEAGCCLSDDDDVKEEQIFVLNPSTREFKKILVQRRVGER 207
           F GSSNGLLC+           A   L +D       +F+ NP+T E KK L       R
Sbjct: 146 FFGSSNGLLCM-----------ANILLLND-------VFLYNPTTGESKK-LPDLPESLR 186

Query: 208 GKMLRSLF--WFGYDCKIDDYKVVRVVDFDRSGKESFEVEVYTLGSDSWKRIGNVSYKFE 381
            K  ++LF   FG+D   +D+KVV+ +D    G +++   VY+L +DSW+RI N+ YK  
Sbjct: 187 SKSTKTLFSYGFGFDSLNNDFKVVKFID----GNDNY---VYSLKTDSWRRICNMPYKDV 239

Query: 382 QHH-GVLVSGALHWFAVSTVQQL--KVLVSFDIVNERF 486
                V ++GA+HW ++    +   KV+ +FD+  E+F
Sbjct: 240 CFFTSVELNGAIHWISIPRRGETSQKVVTAFDLTTEKF 277


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