BLASTX nr result

ID: Papaver23_contig00028343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00028343
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332099.1| predicted protein [Populus trichocarpa] gi|2...   125   7e-27
ref|XP_002332097.1| predicted protein [Populus trichocarpa] gi|2...   123   3e-26
ref|XP_002527984.1| Ubiquinone biosynthesis protein coq-8, putat...   120   2e-25
ref|XP_002874225.1| ABC1 family protein [Arabidopsis lyrata subs...   119   4e-25
ref|XP_003563512.1| PREDICTED: uncharacterized protein LOC100845...   118   7e-25

>ref|XP_002332099.1| predicted protein [Populus trichocarpa] gi|222874919|gb|EEF12050.1|
            predicted protein [Populus trichocarpa]
          Length = 987

 Score =  125 bits (313), Expect = 7e-27
 Identities = 60/121 (49%), Positives = 81/121 (66%), Gaps = 4/121 (3%)
 Frame = +2

Query: 200  SKVDRIFSNPKVLDAFLGVGDYSNMVIPNGKFGLGFRRFDSTDXXXXXXXXXXXXXXXXX 379
            +  ++IF+NP++ D F+GVG+Y N+V+PNGKFGLGFRRF S+D                 
Sbjct: 867  NNANKIFNNPRIHDEFMGVGEYRNLVLPNGKFGLGFRRFSSSDGSFYGFGHSGMGGSTGF 926

Query: 380  CDNKHNFAIAVTLNKMSLGSVTRNIIQLVCSELNLPVPEEYLKRDEKGP----NMQTPMI 547
            CD K+ FAIAVTLNKMSLG+ TR I+Q VCSELN+P+P+E+    E  P    ++  P+I
Sbjct: 927  CDIKNRFAIAVTLNKMSLGTATRRIVQFVCSELNVPLPDEFAVLSETAPDEELSIARPLI 986

Query: 548  N 550
            N
Sbjct: 987  N 987


>ref|XP_002332097.1| predicted protein [Populus trichocarpa] gi|222874917|gb|EEF12048.1|
           predicted protein [Populus trichocarpa]
          Length = 152

 Score =  123 bits (308), Expect = 3e-26
 Identities = 57/97 (58%), Positives = 71/97 (73%)
 Frame = +2

Query: 212 RIFSNPKVLDAFLGVGDYSNMVIPNGKFGLGFRRFDSTDXXXXXXXXXXXXXXXXXCDNK 391
           RIF+NP++ D F+G G+Y N+V+PNGKFGLGFRRF S+D                 CDNK
Sbjct: 52  RIFNNPRIHDEFMGAGEYRNLVLPNGKFGLGFRRFRSSDGSFYGFGHSGIGGSTGFCDNK 111

Query: 392 HNFAIAVTLNKMSLGSVTRNIIQLVCSELNLPVPEEY 502
           + FAIAVTLNKMSLG+ TR IIQ VCSELN+P+P+E+
Sbjct: 112 NRFAIAVTLNKMSLGTATRRIIQFVCSELNVPLPDEF 148


>ref|XP_002527984.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
            gi|223532610|gb|EEF34396.1| Ubiquinone biosynthesis
            protein coq-8, putative [Ricinus communis]
          Length = 965

 Score =  120 bits (300), Expect = 2e-25
 Identities = 61/119 (51%), Positives = 78/119 (65%), Gaps = 4/119 (3%)
 Frame = +2

Query: 206  VDRIFSNPKVLDAFLGVGDYSNMVIPNGKFGLGFRRFDSTDXXXXXXXXXXXXXXXXXCD 385
            V RIF +P++ DAFLGVG+Y N+ +PNGKFGLGFRR  S D                 CD
Sbjct: 847  VTRIFIDPRIHDAFLGVGEYENLAVPNGKFGLGFRRNSSNDGSLIGFGHSGMGGSTGFCD 906

Query: 386  NKHNFAIAVTLNKMSLGSVTRNIIQLVCSELNLPVPEEYLKRDEKGP----NMQTPMIN 550
             K+ FAIAVT+NK+S+G VTR I +LVCSE+N+P+PEE     E+GP    N+  P+IN
Sbjct: 907  IKNRFAIAVTVNKLSVGFVTRKIAELVCSEVNVPLPEELSISGERGPDLELNIGKPLIN 965


>ref|XP_002874225.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297320062|gb|EFH50484.1| ABC1 family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1011

 Score =  119 bits (298), Expect = 4e-25
 Identities = 57/117 (48%), Positives = 78/117 (66%), Gaps = 2/117 (1%)
 Frame = +2

Query: 206  VDRIFSNPKVLDAFLGVGDYSNMVIPNGKFGLGFRRFDSTDXXXXXXXXXXXXXXXXXCD 385
            +  +FSNP + DAF+G GDYS +V+P+GKFGLGF+R  S D                 CD
Sbjct: 895  IHNLFSNPSIHDAFMGAGDYSGLVVPDGKFGLGFKRVISQDGSLVGFGHSGMGGSTGFCD 954

Query: 386  NKHNFAIAVTLNKMSLGSVTRNIIQLVCSELNLPVPEEYLKRDEKGPNMQ--TPMIN 550
             K+ F+IAVTLNKMS+G VT  I++LVCSELN+P+P+++    + GP+ Q  TP+IN
Sbjct: 955  IKNRFSIAVTLNKMSMGGVTAKIVKLVCSELNIPLPKDFSLSTDTGPDSQMGTPLIN 1011


>ref|XP_003563512.1| PREDICTED: uncharacterized protein LOC100845772 [Brachypodium
            distachyon]
          Length = 940

 Score =  118 bits (296), Expect = 7e-25
 Identities = 54/112 (48%), Positives = 72/112 (64%)
 Frame = +2

Query: 197  TSKVDRIFSNPKVLDAFLGVGDYSNMVIPNGKFGLGFRRFDSTDXXXXXXXXXXXXXXXX 376
            T     +F+N  +LDAF+G+GDYS M+ PNGKFGLGFRR+  +                 
Sbjct: 815  TGSASTMFANSDILDAFMGIGDYSGMIYPNGKFGLGFRRYGRSGSAPMGFGHSGMGGSTG 874

Query: 377  XCDNKHNFAIAVTLNKMSLGSVTRNIIQLVCSELNLPVPEEYLKRDEKGPNM 532
             CD +H FAIAVT+N+MSLGS TR +++ VC EL +PVP+E+    EKGP+M
Sbjct: 875  FCDPEHGFAIAVTVNRMSLGSSTRRVVRFVCEELGVPVPDEFSVSGEKGPDM 926


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