BLASTX nr result

ID: Papaver23_contig00028294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00028294
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313308.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|NP_001234021.1| polygalacturonase-2 precursor [Solanum lycop...    94   2e-17
ref|XP_002277214.2| PREDICTED: polygalacturonase-like [Vitis vin...    93   2e-17
emb|CAC05657.1| endopolygalacturonase [Brassica napus] gi|996752...    92   3e-17
sp|P35336.1|PGLR_ACTDE RecName: Full=Polygalacturonase; Short=PG...    92   4e-17

>ref|XP_002313308.1| predicted protein [Populus trichocarpa] gi|222849716|gb|EEE87263.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/77 (59%), Positives = 60/77 (77%)
 Frame = +1

Query: 256 VSAKRIMSVADFGAKGDGKTDDSKAFLKAWKKACSSKNAVDLVIPKKKNYRLKPATFKGP 435
           VS+ ++++V DFGAK DG TDDS+AF KAW++ACSSK +  +VIPK K Y LKP TF GP
Sbjct: 3   VSSAKVVNVDDFGAKADG-TDDSQAFKKAWEEACSSKGSAIIVIPKNKIYYLKPVTFSGP 61

Query: 436 CKSNITIKIDGDIEASA 486
           C+S++  KI G I+ASA
Sbjct: 62  CESDLVFKIFGTIKASA 78


>ref|NP_001234021.1| polygalacturonase-2 precursor [Solanum lycopersicum]
           gi|129939|sp|P05117.1|PGLR_SOLLC RecName:
           Full=Polygalacturonase-2; Short=PG; AltName: Full=PG-2A;
           AltName: Full=PG-2B; AltName: Full=Pectinase; Flags:
           Precursor gi|19292|emb|CAA28254.1| unnamed protein
           product [Solanum lycopersicum] gi|19298|emb|CAA29148.1|
           unnamed protein product [Solanum lycopersicum]
           gi|170473|gb|AAA34178.1| polygalacturonase [Solanum
           lycopersicum] gi|295813|emb|CAA32235.1|
           polygalacturonase [Solanum lycopersicum]
          Length = 457

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/85 (52%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
 Frame = +1

Query: 238 NNGHTKVSAK--RIMSVADFGAKGDGKTDDSKAFLKAWKKACSSKNAVDLVIPKKKNYRL 411
           NN   KV     ++++V  FGAKGDGKT D+ AF +AW +ACSS+  V  V+PK KNY L
Sbjct: 62  NNNIDKVDKNGIKVINVLSFGAKGDGKTYDNIAFEQAWNEACSSRTPVQFVVPKNKNYLL 121

Query: 412 KPATFKGPCKSNITIKIDGDIEASA 486
           K  TF GPC+S+I++KI G +EAS+
Sbjct: 122 KQITFSGPCRSSISVKIFGSLEASS 146


>ref|XP_002277214.2| PREDICTED: polygalacturonase-like [Vitis vinifera]
           gi|297739725|emb|CBI29907.3| unnamed protein product
           [Vitis vinifera]
          Length = 442

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/82 (58%), Positives = 64/82 (78%)
 Frame = +1

Query: 244 GHTKVSAKRIMSVADFGAKGDGKTDDSKAFLKAWKKACSSKNAVDLVIPKKKNYRLKPAT 423
           G +  S K + SV D+GAKGDG +D ++AF KAW+ ACSS+ +V LV+PK KNY LKP T
Sbjct: 67  GRSLASVKTV-SVNDYGAKGDG-SDATEAFKKAWEAACSSQGSV-LVVPKNKNYLLKPIT 123

Query: 424 FKGPCKSNITIKIDGDIEASAD 489
           F+GPCKS+IT++I G ++ASAD
Sbjct: 124 FEGPCKSSITVQIYGTVQASAD 145


>emb|CAC05657.1| endopolygalacturonase [Brassica napus] gi|9967520|emb|CAC05658.1|
           endopolygalacturonase [Brassica napus]
          Length = 434

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/70 (60%), Positives = 55/70 (78%)
 Frame = +1

Query: 274 MSVADFGAKGDGKTDDSKAFLKAWKKACSSKNAVDLVIPKKKNYRLKPATFKGPCKSNIT 453
           +SV+DFGAKGDGKTDD++AF+ AWKKACSS  AV+L++P+ K Y LK     GPCKS +T
Sbjct: 68  VSVSDFGAKGDGKTDDTQAFVNAWKKACSSSGAVNLLVPEGKTYFLKSLRLNGPCKSVLT 127

Query: 454 IKIDGDIEAS 483
           ++I G + AS
Sbjct: 128 VQILGTLSAS 137


>sp|P35336.1|PGLR_ACTDE RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
           Flags: Precursor gi|166325|gb|AAC14453.1|
           polygalacturonase [Actinidia deliciosa var. deliciosa]
          Length = 467

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 51/101 (50%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
 Frame = +1

Query: 190 SDSNNEQGEILRFRGINNGHTKV-SAKRIMSVADFGAKGDGKTDDSKAFLKAWKKACSSK 366
           S  ++E G I   R ++ G  +V  A + ++V DFGAKGDG+ DD+KAF KAWK ACSS 
Sbjct: 62  SSMSHENG-IFGLRKVDYGMDRVLDASKTVNVDDFGAKGDGR-DDTKAFEKAWKAACSST 119

Query: 367 NAVDLVIPKKKNYRLKPATFKGPCKSNITIKIDGDIEASAD 489
           ++  L++PKK NY ++P +F GPCKS +T++I G IEAS D
Sbjct: 120 SSAVLLVPKK-NYLVRPISFSGPCKSGLTMQIYGTIEASDD 159


Top