BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00028222
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17549.3| unnamed protein product [Vitis vinifera]              112   2e-37
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   112   2e-37
dbj|BAJ95336.1| predicted protein [Hordeum vulgare subsp. vulgar...   128   2e-34
dbj|BAK01665.1| predicted protein [Hordeum vulgare subsp. vulgare]    127   5e-34
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   109   8e-34

>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  112 bits (280), Expect(2) = 2e-37
 Identities = 75/186 (40%), Positives = 102/186 (54%), Gaps = 8/186 (4%)
 Frame = -1

Query: 677 LSLPLKEKFKKWFVEGDQVNRFVSLKYLAPDDPEEIVLQEIQQHANLVQGLWVCKTNLLP 498
           LS+PL+E+FK    EG  V+RF +LK+ APD+  E VL  + +HA+LVQGLWV K++LL 
Sbjct: 337 LSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLF 396

Query: 497 LKAAEMA--ARDKILCLFSKTALIPDKILGKILEELGCYNDETKKAMADAAIGSVAVHRD 324
                +A  ARD IL LFSK  LI        ++  G  N   K       +  +AV R 
Sbjct: 397 PGGQGVAPLARDYILLLFSKGPLIN----YSQVDVPGSLNKALK-----GFLSILAVERP 447

Query: 323 KCRDWKFKVPSDTSFIQDHPEIVKEQENLWRIRENTMV------RKTEHSVRNKRKPSMA 162
             RDWKFK P+D SF++ HP+IV+EQ  +W   E  +        +     +N  KPS+A
Sbjct: 448 SFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIA 507

Query: 161 KNHGAS 144
              G S
Sbjct: 508 NKTGTS 513



 Score = 70.5 bits (171), Expect(2) = 2e-37
 Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
 Frame = -3

Query: 858 WVSLEYHGVDSIFSSRFRQKMTSEEITPIRFSMNPYNYANSLCPPTPVDDDGR-KTLLRR 682
           WV L+YH  +S FS+R+ QKM +E+ +PI+F M+PY Y NSLCPP   +DD R K L RR
Sbjct: 275 WVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRR 334

Query: 681 LSVS 670
             +S
Sbjct: 335 FLLS 338


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
           vinifera]
          Length = 672

 Score =  112 bits (280), Expect(2) = 2e-37
 Identities = 75/186 (40%), Positives = 102/186 (54%), Gaps = 8/186 (4%)
 Frame = -1

Query: 677 LSLPLKEKFKKWFVEGDQVNRFVSLKYLAPDDPEEIVLQEIQQHANLVQGLWVCKTNLLP 498
           LS+PL+E+FK    EG  V+RF +LK+ APD+  E VL  + +HA+LVQGLWV K++LL 
Sbjct: 321 LSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLF 380

Query: 497 LKAAEMA--ARDKILCLFSKTALIPDKILGKILEELGCYNDETKKAMADAAIGSVAVHRD 324
                +A  ARD IL LFSK  LI        ++  G  N   K       +  +AV R 
Sbjct: 381 PGGQGVAPLARDYILLLFSKGPLIN----YSQVDVPGSLNKALK-----GFLSILAVERP 431

Query: 323 KCRDWKFKVPSDTSFIQDHPEIVKEQENLWRIRENTMV------RKTEHSVRNKRKPSMA 162
             RDWKFK P+D SF++ HP+IV+EQ  +W   E  +        +     +N  KPS+A
Sbjct: 432 SFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIA 491

Query: 161 KNHGAS 144
              G S
Sbjct: 492 NKTGTS 497



 Score = 70.5 bits (171), Expect(2) = 2e-37
 Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
 Frame = -3

Query: 858 WVSLEYHGVDSIFSSRFRQKMTSEEITPIRFSMNPYNYANSLCPPTPVDDDGR-KTLLRR 682
           WV L+YH  +S FS+R+ QKM +E+ +PI+F M+PY Y NSLCPP   +DD R K L RR
Sbjct: 259 WVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRR 318

Query: 681 LSVS 670
             +S
Sbjct: 319 FLLS 322


>dbj|BAJ95336.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326526307|dbj|BAJ97170.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 676

 Score =  128 bits (322), Expect(2) = 2e-34
 Identities = 76/183 (41%), Positives = 111/183 (60%)
 Frame = -1

Query: 677 LSLPLKEKFKKWFVEGDQVNRFVSLKYLAPDDPEEIVLQEIQQHANLVQGLWVCKTNLLP 498
           LSLPL+E+ KKWF E  QV++FV+L +LAPD  EE VL+ +  +A+LV+GLWVC+++LL 
Sbjct: 339 LSLPLEERLKKWFTEVSQVSQFVALMHLAPDCSEEDVLEILPVYADLVRGLWVCRSSLL- 397

Query: 497 LKAAEMAARDKILCLFSKTALIPDKILGKILEELGCYNDETKKAMADAAIGSVAVHRDKC 318
                 + RD+I+  F+K   IP K + +++       DE  + M    +G     R+K 
Sbjct: 398 YDDGLASKRDQIMLEFTKMESIPVKYVERLI------RDERTRNMILNPLGK---RREKL 448

Query: 317 RDWKFKVPSDTSFIQDHPEIVKEQENLWRIRENTMVRKTEHSVRNKRKPSMAKNHGASGI 138
           +D+KF V +D+SFI+ HP IVKEQEN W +R  TM    E   R+  +    KN   S I
Sbjct: 449 QDYKFIVAADSSFIKRHPHIVKEQENAWSVRAATMPDPLE--TRSATEQRKTKNSARSNI 506

Query: 137 PIQ 129
           P++
Sbjct: 507 PVK 509



 Score = 44.3 bits (103), Expect(2) = 2e-34
 Identities = 20/48 (41%), Positives = 29/48 (60%)
 Frame = -3

Query: 861 PWVSLEYHGVDSIFSSRFRQKMTSEEITPIRFSMNPYNYANSLCPPTP 718
           PW+SL Y    S  +S++  +M + E  PI F+M+  +YA SLCP  P
Sbjct: 276 PWISLTYEPAGSDVASKYYAEMVASEGRPIDFTMSTQDYAASLCPGGP 323


>dbj|BAK01665.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 677

 Score =  127 bits (319), Expect(2) = 5e-34
 Identities = 75/183 (40%), Positives = 112/183 (61%)
 Frame = -1

Query: 677 LSLPLKEKFKKWFVEGDQVNRFVSLKYLAPDDPEEIVLQEIQQHANLVQGLWVCKTNLLP 498
           LSLPL+E+ KKWF E  QV++FV+L +LAPD  EE VL+ +  +A+LV+GLWVC+++LL 
Sbjct: 340 LSLPLEERLKKWFTEVSQVSQFVALMHLAPDCSEEDVLEILPVYADLVRGLWVCRSSLL- 398

Query: 497 LKAAEMAARDKILCLFSKTALIPDKILGKILEELGCYNDETKKAMADAAIGSVAVHRDKC 318
                 + RD+I+  F+K   IP K + +++       DE  + M    +G     R+K 
Sbjct: 399 YDDGLASKRDQIMLEFTKMESIPVKYVERLI------RDERTRNMILNPLGK---RREKL 449

Query: 317 RDWKFKVPSDTSFIQDHPEIVKEQENLWRIRENTMVRKTEHSVRNKRKPSMAKNHGASGI 138
           +D+KF V +D+SFI+ +P IVKEQEN W +R  TM+   E   R+  +    KN   S I
Sbjct: 450 QDYKFIVAADSSFIKRYPHIVKEQENAWSVRAATMLDPLE--TRSATEQRKTKNSARSNI 507

Query: 137 PIQ 129
           P++
Sbjct: 508 PVK 510



 Score = 43.9 bits (102), Expect(2) = 5e-34
 Identities = 20/48 (41%), Positives = 29/48 (60%)
 Frame = -3

Query: 861 PWVSLEYHGVDSIFSSRFRQKMTSEEITPIRFSMNPYNYANSLCPPTP 718
           PW+SL Y    S  +S++  +M + E  PI F+M+  +YA SLCP  P
Sbjct: 277 PWISLTYEPAGSDVASKYYAEMVASEGRPIDFTMSTQDYAVSLCPGGP 324


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 677

 Score =  109 bits (272), Expect(2) = 8e-34
 Identities = 68/177 (38%), Positives = 98/177 (55%), Gaps = 4/177 (2%)
 Frame = -1

Query: 677 LSLPLKEKFKKWFVEGDQVNRFVSLKYLAPDDPEEIVLQEIQQHANLVQGLWVCKTNLL- 501
           LSLPL E+ KK  +EG  V RF  LK+ APDD  E VL+ +Q++  LVQGLW  K++LL 
Sbjct: 331 LSLPLAERLKKLILEGPPVQRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLF 390

Query: 500 PLKAAEMAARDKILCLFSKTALIPDKILG---KILEELGCYNDETKKAMADAAIGSVAVH 330
           P   ++   RD +L LFSK  +I    +    KI EE+  +            +   AV 
Sbjct: 391 PDANSKQGIRDYVLLLFSKNLVINSSQVNFPVKIKEEIKSF------------LNLFAVE 438

Query: 329 RDKCRDWKFKVPSDTSFIQDHPEIVKEQENLWRIRENTMVRKTEHSVRNKRKPSMAK 159
           R   +DWKFK  +DT+FI+ +P+IVK+QE  W   E  + +  + S +   K ++ K
Sbjct: 439 RPSFKDWKFKEHTDTTFIKLYPDIVKKQEEAWDNTEKRLSKVFDRSGKASMKNAIPK 495



 Score = 61.2 bits (147), Expect(2) = 8e-34
 Identities = 28/63 (44%), Positives = 41/63 (65%)
 Frame = -3

Query: 858 WVSLEYHGVDSIFSSRFRQKMTSEEITPIRFSMNPYNYANSLCPPTPVDDDGRKTLLRRL 679
           W+SL+YHG  S FSSR+ +KM ++E +P+ F+M PY+Y +SLCP    +    K   RR 
Sbjct: 270 WISLKYHGSKSDFSSRYLEKMIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRF 329

Query: 678 SVS 670
            +S
Sbjct: 330 LLS 332