BLASTX nr result

ID: Papaver23_contig00028107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00028107
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532584.1| pentatricopeptide repeat-containing protein,...   129   9e-28
ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...   115   8e-24
emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]   114   3e-23
ref|XP_003545174.1| PREDICTED: pentatricopeptide repeat-containi...   106   6e-21
ref|XP_003518473.1| PREDICTED: pentatricopeptide repeat-containi...   105   8e-21

>ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527693|gb|EEF29801.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 895

 Score =  129 bits (323), Expect = 9e-28
 Identities = 64/157 (40%), Positives = 101/157 (64%)
 Frame = -1

Query: 768  MEHYGRQASSFIGNVLLYHSFRKEGRTLYQAFVNFEATPKEASLSSKLTLGQLVGLFSGG 589
            +E +GR+ +SFIGN+LL HS + +   LY A++       E SL+  L LGQ++G F+G 
Sbjct: 742  LEKFGRRVTSFIGNILLLHSLKSD--ELYDAWLQVREVQNETSLNL-LILGQIIGAFAGR 798

Query: 588  IKVDSGDEFLENMDEVVEQCFPPDIFTYXXXXXXXXXXXXMDYASQLFHKMCMKGYEPNG 409
            +K+    + ++N++EV+EQCFP D++TY             D+A +LF ++C KGYEPN 
Sbjct: 799  LKLS---QQIDNLEEVIEQCFPLDLYTYNMLMRRLSMSNI-DHARELFDRICQKGYEPNH 854

Query: 408  WTYAIIAQGLRRYGRPEDAKAWIDKMGRAGYAVTGQT 298
            WTY I+  GL + GR  +A+ W+D+M R G++ +G+T
Sbjct: 855  WTYDILVHGLFKNGRIGEARRWVDEMFRKGFSPSGRT 891


>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Vitis vinifera]
          Length = 881

 Score =  115 bits (289), Expect = 8e-24
 Identities = 66/157 (42%), Positives = 92/157 (58%)
 Frame = -1

Query: 768  MEHYGRQASSFIGNVLLYHSFRKEGRTLYQAFVNFEATPKEASLSSKLTLGQLVGLFSGG 589
            +E  GR  SSFIGNVLL HS +     L++ +V+ +    E S S  L LGQL+G FSG 
Sbjct: 728  LERVGRHVSSFIGNVLLLHSLKTP--ELFETWVHAKDAHNEIS-SPNLILGQLIGEFSGC 784

Query: 588  IKVDSGDEFLENMDEVVEQCFPPDIFTYXXXXXXXXXXXXMDYASQLFHKMCMKGYEPNG 409
            I V+    +LE   EV++QCFP D++TY             D A +LF+++C KGYEPN 
Sbjct: 785  IGVNQDFNYLE---EVMQQCFPLDLYTYNMLLRRLTRSDM-DLALELFNRICQKGYEPNR 840

Query: 408  WTYAIIAQGLRRYGRPEDAKAWIDKMGRAGYAVTGQT 298
            WTY I+  GL ++GR  +A  W+++M   G+  T  T
Sbjct: 841  WTYDILVHGLFKHGRTSEANKWVEEMFCKGFEPTEAT 877


>emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]
          Length = 1173

 Score =  114 bits (284), Expect = 3e-23
 Identities = 65/152 (42%), Positives = 90/152 (59%)
 Frame = -1

Query: 768  MEHYGRQASSFIGNVLLYHSFRKEGRTLYQAFVNFEATPKEASLSSKLTLGQLVGLFSGG 589
            +E  GR  SSFIGNVLL HS +     L++ +V+ +    E S S  L LGQL+G FSG 
Sbjct: 728  LERVGRHVSSFIGNVLLLHSLKTP--ELFETWVHAKDAHNEIS-SPNLILGQLIGEFSGC 784

Query: 588  IKVDSGDEFLENMDEVVEQCFPPDIFTYXXXXXXXXXXXXMDYASQLFHKMCMKGYEPNG 409
            I V+    +LE   EV++QCFP D++TY             D A +LF+++C KGYEPN 
Sbjct: 785  IGVNQDFNYLE---EVMQQCFPLDLYTYNMLLRRLTRSDM-DLALELFNRICQKGYEPNR 840

Query: 408  WTYAIIAQGLRRYGRPEDAKAWIDKMGRAGYA 313
            WTY I+  GL ++GR  +A  W+++M   G A
Sbjct: 841  WTYDILVHGLFKHGRTSEANKWVEEMFCKGKA 872


>ref|XP_003545174.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Glycine max]
          Length = 868

 Score =  106 bits (264), Expect = 6e-21
 Identities = 58/147 (39%), Positives = 84/147 (57%)
 Frame = -1

Query: 756  GRQASSFIGNVLLYHSFRKEGRTLYQAFVNFEATPKEASLSSKLTLGQLVGLFSGGIKVD 577
            GR  SSFIGNVLLYHS       LY    N+    +E   S   TL  ++G FSG ++V 
Sbjct: 724  GRPVSSFIGNVLLYHSLISP--QLYDT-CNYLRGAEEGVFSGNSTLCWMIGAFSGRLRVS 780

Query: 576  SGDEFLENMDEVVEQCFPPDIFTYXXXXXXXXXXXXMDYASQLFHKMCMKGYEPNGWTYA 397
                ++ +++ +VE+CFPP+IFTY             D A  LF +MC +GY+PN WTY 
Sbjct: 781  ---HYIADLERLVERCFPPNIFTYNLLLKQVAKSDM-DKARLLFARMCQRGYQPNCWTYD 836

Query: 396  IIAQGLRRYGRPEDAKAWIDKMGRAGY 316
            I+ +G   +GR  +A+ W+++M R G+
Sbjct: 837  IMVRGFSIHGRKHEARRWLEEMFRKGF 863


>ref|XP_003518473.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Glycine max]
          Length = 872

 Score =  105 bits (263), Expect = 8e-21
 Identities = 57/144 (39%), Positives = 82/144 (56%)
 Frame = -1

Query: 756  GRQASSFIGNVLLYHSFRKEGRTLYQAFVNFEATPKEASLSSKLTLGQLVGLFSGGIKVD 577
            GR  SSFIGNVLLYHS       LY   VN     +E   S   TL  ++G FSG ++V 
Sbjct: 735  GRPVSSFIGNVLLYHSLISP--QLYDTCVNLRGV-EEGVFSGNSTLCLMIGAFSGRLRVS 791

Query: 576  SGDEFLENMDEVVEQCFPPDIFTYXXXXXXXXXXXXMDYASQLFHKMCMKGYEPNGWTYA 397
                ++ +++ ++E+CFPP+IFTY             D A  LF +MC +GY+PN WTY 
Sbjct: 792  ---HYITDLERLIEKCFPPNIFTYNLLLKQVARSDM-DKARLLFARMCQRGYQPNSWTYD 847

Query: 396  IIAQGLRRYGRPEDAKAWIDKMGR 325
            I+ +G   +GR ++A+ W+ +M R
Sbjct: 848  IMVRGFSIHGRNDEARRWLKEMFR 871


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