BLASTX nr result

ID: Papaver23_contig00028054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00028054
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300334.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-43
ref|XP_002526608.1| DNA repair protein xp-E, putative [Ricinus c...   175   4e-42
ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isof...   172   3e-41
ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isof...   172   3e-41
sp|Q6E7D1.1|DDB1_SOLCE RecName: Full=DNA damage-binding protein ...   171   4e-41

>ref|XP_002300334.1| predicted protein [Populus trichocarpa] gi|222847592|gb|EEE85139.1|
            predicted protein [Populus trichocarpa]
          Length = 1088

 Score =  177 bits (450), Expect = 6e-43
 Identities = 90/104 (86%), Positives = 96/104 (92%)
 Frame = +1

Query: 1    PTVIFGTVNGVIGVIASLPQEHYLFLEKLQSNLVKVIKGVGKLNHEQWRSFNNEKKTVDA 180
            PTVIFGTVNGVIGVIASLP E YLFLEKLQSNL KVIKGVG L+HEQWRSFNNEKKTVDA
Sbjct: 984  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTVDA 1043

Query: 181  KNFLDGDLIESFLDLSRNRMEEISVAMSVSVEALCEIVEELTKL 312
            KNFLDGDLIESFLDLSR+RM+EIS AM +SVE LC+ VEELT+L
Sbjct: 1044 KNFLDGDLIESFLDLSRSRMDEISKAMEISVEELCKRVEELTRL 1087


>ref|XP_002526608.1| DNA repair protein xp-E, putative [Ricinus communis]
            gi|223534048|gb|EEF35767.1| DNA repair protein xp-E,
            putative [Ricinus communis]
          Length = 1033

 Score =  175 bits (443), Expect = 4e-42
 Identities = 88/104 (84%), Positives = 96/104 (92%)
 Frame = +1

Query: 1    PTVIFGTVNGVIGVIASLPQEHYLFLEKLQSNLVKVIKGVGKLNHEQWRSFNNEKKTVDA 180
            PTVIFGTVNGVIGVIASLP E Y+FLEKLQSNL +VIKGVG L+HEQWRSFNNEKKTV+A
Sbjct: 929  PTVIFGTVNGVIGVIASLPHEQYIFLEKLQSNLRRVIKGVGGLSHEQWRSFNNEKKTVEA 988

Query: 181  KNFLDGDLIESFLDLSRNRMEEISVAMSVSVEALCEIVEELTKL 312
            KNFLDGDLIESFLDLSRNRM+EIS A+ VSVE LC+ VEELT+L
Sbjct: 989  KNFLDGDLIESFLDLSRNRMDEISKAIGVSVEELCKRVEELTRL 1032


>ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isoform 2 [Vitis vinifera]
          Length = 1068

 Score =  172 bits (436), Expect = 3e-41
 Identities = 86/104 (82%), Positives = 96/104 (92%)
 Frame = +1

Query: 1    PTVIFGTVNGVIGVIASLPQEHYLFLEKLQSNLVKVIKGVGKLNHEQWRSFNNEKKTVDA 180
            PTVIFGTVNGVIGVIASLP + Y+FLEKLQ+NL KVIKGVG L+HEQWRSFNNEKKTVDA
Sbjct: 964  PTVIFGTVNGVIGVIASLPHDQYVFLEKLQANLRKVIKGVGGLSHEQWRSFNNEKKTVDA 1023

Query: 181  KNFLDGDLIESFLDLSRNRMEEISVAMSVSVEALCEIVEELTKL 312
            KNFLDGDLIE+FLDL+R RM+EIS AM+VSVE LC+ VEELT+L
Sbjct: 1024 KNFLDGDLIETFLDLNRTRMDEISKAMAVSVEELCKRVEELTRL 1067


>ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isoform 1 [Vitis vinifera]
          Length = 1089

 Score =  172 bits (436), Expect = 3e-41
 Identities = 86/104 (82%), Positives = 96/104 (92%)
 Frame = +1

Query: 1    PTVIFGTVNGVIGVIASLPQEHYLFLEKLQSNLVKVIKGVGKLNHEQWRSFNNEKKTVDA 180
            PTVIFGTVNGVIGVIASLP + Y+FLEKLQ+NL KVIKGVG L+HEQWRSFNNEKKTVDA
Sbjct: 985  PTVIFGTVNGVIGVIASLPHDQYVFLEKLQANLRKVIKGVGGLSHEQWRSFNNEKKTVDA 1044

Query: 181  KNFLDGDLIESFLDLSRNRMEEISVAMSVSVEALCEIVEELTKL 312
            KNFLDGDLIE+FLDL+R RM+EIS AM+VSVE LC+ VEELT+L
Sbjct: 1045 KNFLDGDLIETFLDLNRTRMDEISKAMAVSVEELCKRVEELTRL 1088


>sp|Q6E7D1.1|DDB1_SOLCE RecName: Full=DNA damage-binding protein 1; AltName: Full=UV-damaged
            DNA-binding protein 1 gi|49484911|gb|AAT66742.1|
            UV-damaged DNA binding protein 1 [Solanum cheesmaniae]
          Length = 1095

 Score =  171 bits (434), Expect = 4e-41
 Identities = 89/104 (85%), Positives = 94/104 (90%)
 Frame = +1

Query: 1    PTVIFGTVNGVIGVIASLPQEHYLFLEKLQSNLVKVIKGVGKLNHEQWRSFNNEKKTVDA 180
            PTVIFGTVNGVIGVIASLP + YLFLEKLQ+NL KVIKGVG L+HEQWRSF NEKKTVDA
Sbjct: 991  PTVIFGTVNGVIGVIASLPHDQYLFLEKLQTNLRKVIKGVGGLSHEQWRSFYNEKKTVDA 1050

Query: 181  KNFLDGDLIESFLDLSRNRMEEISVAMSVSVEALCEIVEELTKL 312
            KNFLDGDLIESFLDLSRNRMEEIS AMSV VE L + VEELT+L
Sbjct: 1051 KNFLDGDLIESFLDLSRNRMEEISKAMSVPVEELMKRVEELTRL 1094


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