BLASTX nr result

ID: Papaver23_contig00027931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00027931
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283557.1| PREDICTED: general transcription factor IIE ...   145   6e-33
emb|CBI17573.3| unnamed protein product [Vitis vinifera]              145   8e-33
ref|XP_002509755.1| Transcription initiation factor IIE subunit ...   144   2e-32
ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|2...   140   3e-31
ref|XP_004146528.1| PREDICTED: general transcription factor IIE ...   140   3e-31

>ref|XP_002283557.1| PREDICTED: general transcription factor IIE subunit 2 [Vitis
           vinifera] gi|297742556|emb|CBI34705.3| unnamed protein
           product [Vitis vinifera]
          Length = 285

 Score =  145 bits (367), Expect = 6e-33
 Identities = 81/133 (60%), Positives = 95/133 (71%)
 Frame = -1

Query: 399 MGLEESLAKFKRQQEKCQSTLTSINNARAGSFRAAASPHDKSVPXXXXXXXXXXXXXIKF 220
           M L+ESLAKFK+QQEKCQSTLTSI  A+AGS +       K  P              KF
Sbjct: 1   MALQESLAKFKKQQEKCQSTLTSIA-AKAGSSKPTVP--QKFTPAAPTKPPTPAV---KF 54

Query: 219 SDDTQRLQHINSVRKSTIGAQLKRVLDLLRETREAFTAEQINEACYVDAINNKEVFNGLA 40
           S+DT+RLQHINS+RK+ +GAQ+KRV+DLL ETR+AFT EQINEACYVD   NK VF+ L 
Sbjct: 55  SNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEACYVDTNANKAVFDSLR 114

Query: 39  NNDKVYYDGKRFS 1
           NN KV YDGKRF+
Sbjct: 115 NNPKVSYDGKRFA 127


>emb|CBI17573.3| unnamed protein product [Vitis vinifera]
          Length = 178

 Score =  145 bits (366), Expect = 8e-33
 Identities = 78/133 (58%), Positives = 91/133 (68%)
 Frame = -1

Query: 399 MGLEESLAKFKRQQEKCQSTLTSINNARAGSFRAAASPHDKSVPXXXXXXXXXXXXXIKF 220
           M L+ESLAKFK+QQEKCQSTLTSI      S  +       + P              KF
Sbjct: 1   MALQESLAKFKKQQEKCQSTLTSIAAKAVSSKPSVPQNFTPAAPTKPPTPAV------KF 54

Query: 219 SDDTQRLQHINSVRKSTIGAQLKRVLDLLRETREAFTAEQINEACYVDAINNKEVFNGLA 40
           S+DT+RLQHINS+RK+ +GAQ+KRV+DLL ETR+AFT EQINEACYVD   NK VF+ L 
Sbjct: 55  SNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEACYVDMTANKAVFDSLR 114

Query: 39  NNDKVYYDGKRFS 1
           NN KV YDGKRFS
Sbjct: 115 NNPKVNYDGKRFS 127


>ref|XP_002509755.1| Transcription initiation factor IIE subunit beta, putative [Ricinus
           communis] gi|223549654|gb|EEF51142.1| Transcription
           initiation factor IIE subunit beta, putative [Ricinus
           communis]
          Length = 282

 Score =  144 bits (363), Expect = 2e-32
 Identities = 76/133 (57%), Positives = 97/133 (72%)
 Frame = -1

Query: 399 MGLEESLAKFKRQQEKCQSTLTSINNARAGSFRAAASPHDKSVPXXXXXXXXXXXXXIKF 220
           M L+E L KFKRQQEKCQ+TLTSI  A+AGS + + +P    +              +KF
Sbjct: 1   MDLQEQLNKFKRQQEKCQTTLTSIA-AKAGSHKPSITP---KIVAPSPIIPRTPGPAVKF 56

Query: 219 SDDTQRLQHINSVRKSTIGAQLKRVLDLLRETREAFTAEQINEACYVDAINNKEVFNGLA 40
           S+DT+RLQHI+S+RK+ +GAQ+KRV+DLL ETR+AFT EQINEACYVD  +NK VF+ L 
Sbjct: 57  SNDTERLQHIHSIRKAPVGAQIKRVIDLLFETRQAFTPEQINEACYVDVNSNKAVFDSLR 116

Query: 39  NNDKVYYDGKRFS 1
           NN KV+YDG+ FS
Sbjct: 117 NNPKVHYDGRHFS 129


>ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|222846804|gb|EEE84351.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  140 bits (353), Expect = 3e-31
 Identities = 73/133 (54%), Positives = 94/133 (70%)
 Frame = -1

Query: 399 MGLEESLAKFKRQQEKCQSTLTSINNARAGSFRAAASPHDKSVPXXXXXXXXXXXXXIKF 220
           M L+E L +FK+QQEKCQSTLTSI  +R    +++ +    +V              +KF
Sbjct: 1   MALQEQLDRFKKQQEKCQSTLTSIAKSRPS--KSSLTQKTVAVAPAPSTSARTPAPAVKF 58

Query: 219 SDDTQRLQHINSVRKSTIGAQLKRVLDLLRETREAFTAEQINEACYVDAINNKEVFNGLA 40
           S+DT+RLQHINS+RK+  GAQ+KRV+DLL ETR+AFT EQIN+ CYVD  +NK VF+ L 
Sbjct: 59  SNDTERLQHINSIRKAPAGAQIKRVIDLLLETRQAFTPEQINDHCYVDMNSNKAVFDSLR 118

Query: 39  NNDKVYYDGKRFS 1
           NN KV+YDGKRFS
Sbjct: 119 NNPKVHYDGKRFS 131


>ref|XP_004146528.1| PREDICTED: general transcription factor IIE subunit 2-like [Cucumis
           sativus] gi|449499921|ref|XP_004160955.1| PREDICTED:
           general transcription factor IIE subunit 2-like [Cucumis
           sativus]
          Length = 277

 Score =  140 bits (352), Expect = 3e-31
 Identities = 71/133 (53%), Positives = 93/133 (69%)
 Frame = -1

Query: 399 MGLEESLAKFKRQQEKCQSTLTSINNARAGSFRAAASPHDKSVPXXXXXXXXXXXXXIKF 220
           M L+E L +FK+QQE+CQSTL+ I      + ++ +    K  P             +KF
Sbjct: 1   MALQEQLDRFKKQQERCQSTLSGI-----AASKSVSKSTPKFTPAPAASIARPPAPAVKF 55

Query: 219 SDDTQRLQHINSVRKSTIGAQLKRVLDLLRETREAFTAEQINEACYVDAINNKEVFNGLA 40
           S+DT+RLQHINS+RKS +GAQ+KRV+DLL ETR+AFT EQINEACYVD  +NK V++ L 
Sbjct: 56  SNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLR 115

Query: 39  NNDKVYYDGKRFS 1
           NN KV+YDG+RFS
Sbjct: 116 NNPKVHYDGRRFS 128


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