BLASTX nr result

ID: Papaver23_contig00027927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00027927
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236050.1| uncharacterized protein LOC100527179 [Glycin...   173   5e-41
ref|XP_003551777.1| PREDICTED: upstream activation factor subuni...   171   2e-40
gb|AFK40800.1| unknown [Medicago truncatula]                          169   1e-39
gb|ABE11612.1| SWIb domain-containing protein [Solanum chacoense]     166   7e-39
ref|XP_002277738.1| PREDICTED: upstream activation factor subuni...   165   1e-38

>ref|NP_001236050.1| uncharacterized protein LOC100527179 [Glycine max]
           gi|255631726|gb|ACU16230.1| unknown [Glycine max]
          Length = 100

 Score =  173 bits (438), Expect = 5e-41
 Identities = 83/100 (83%), Positives = 91/100 (91%)
 Frame = -3

Query: 859 MLPSLARKAITDDPKKLANLIDLVNLPSTLREFVGQSQISRLGFFNSVWSYIKTNNLQDP 680
           MLP   +KAITD+PKKLANLIDLVNLPSTLREFVGQSQISRLG F  +WSYIKTNNLQD 
Sbjct: 1   MLPQRMKKAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCIWSYIKTNNLQDQ 60

Query: 679 NNKNVVNCDEKLRMILLGKPRIELAELPMLIKLHFPKEPR 560
           NNKNVVNCDEKL+ ILLGKP++ELAELP LIK+HFPKEP+
Sbjct: 61  NNKNVVNCDEKLKSILLGKPQVELAELPALIKMHFPKEPK 100


>ref|XP_003551777.1| PREDICTED: upstream activation factor subunit spp27-like [Glycine
           max]
          Length = 100

 Score =  171 bits (433), Expect = 2e-40
 Identities = 83/100 (83%), Positives = 90/100 (90%)
 Frame = -3

Query: 859 MLPSLARKAITDDPKKLANLIDLVNLPSTLREFVGQSQISRLGFFNSVWSYIKTNNLQDP 680
           MLP   +KAITD+PKKLANLIDLVNLPSTLREFVGQSQISRLG F  VW YIKTNNLQD 
Sbjct: 1   MLPQRMKKAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCVWFYIKTNNLQDQ 60

Query: 679 NNKNVVNCDEKLRMILLGKPRIELAELPMLIKLHFPKEPR 560
           NNKNVVNCDEKL+ ILLGKP++ELAELP LIK+HFPKEP+
Sbjct: 61  NNKNVVNCDEKLKSILLGKPQVELAELPALIKMHFPKEPK 100


>gb|AFK40800.1| unknown [Medicago truncatula]
          Length = 100

 Score =  169 bits (427), Expect = 1e-39
 Identities = 81/100 (81%), Positives = 90/100 (90%)
 Frame = -3

Query: 859 MLPSLARKAITDDPKKLANLIDLVNLPSTLREFVGQSQISRLGFFNSVWSYIKTNNLQDP 680
           MLP   +KA+TD+PKKLANLIDLVNLPSTLR+FVGQSQ SRL  F  VWSYIKTNNLQDP
Sbjct: 1   MLPQRMKKAVTDNPKKLANLIDLVNLPSTLRDFVGQSQTSRLSCFMRVWSYIKTNNLQDP 60

Query: 679 NNKNVVNCDEKLRMILLGKPRIELAELPMLIKLHFPKEPR 560
           NNKNVVNCDEKL+ ILLGKP+++LAELP LIKLHFPKEP+
Sbjct: 61  NNKNVVNCDEKLKGILLGKPQVDLAELPALIKLHFPKEPK 100


>gb|ABE11612.1| SWIb domain-containing protein [Solanum chacoense]
          Length = 100

 Score =  166 bits (420), Expect = 7e-39
 Identities = 78/100 (78%), Positives = 88/100 (88%)
 Frame = -3

Query: 859 MLPSLARKAITDDPKKLANLIDLVNLPSTLREFVGQSQISRLGFFNSVWSYIKTNNLQDP 680
           MLP   +K +TD+PKKLANLIDLVNLPSTLREF+GQSQ SRLG F  VWSYIK NNLQDP
Sbjct: 1   MLPQRMKKVMTDNPKKLANLIDLVNLPSTLREFMGQSQTSRLGCFKRVWSYIKENNLQDP 60

Query: 679 NNKNVVNCDEKLRMILLGKPRIELAELPMLIKLHFPKEPR 560
           NNKN+VNCDEKL+ +LLGKP++EL ELP LIKLHFPK+PR
Sbjct: 61  NNKNLVNCDEKLKSVLLGKPQVELTELPTLIKLHFPKQPR 100


>ref|XP_002277738.1| PREDICTED: upstream activation factor subunit UAF30 [Vitis
           vinifera] gi|297737490|emb|CBI26691.3| unnamed protein
           product [Vitis vinifera]
          Length = 100

 Score =  165 bits (418), Expect = 1e-38
 Identities = 81/98 (82%), Positives = 87/98 (88%)
 Frame = -3

Query: 859 MLPSLARKAITDDPKKLANLIDLVNLPSTLREFVGQSQISRLGFFNSVWSYIKTNNLQDP 680
           MLP   ++AIT++PKKLANLIDL NLPSTLREFVGQSQISRLG F  VWSYIK NNLQDP
Sbjct: 1   MLPQRVKRAITENPKKLANLIDLANLPSTLREFVGQSQISRLGCFMRVWSYIKANNLQDP 60

Query: 679 NNKNVVNCDEKLRMILLGKPRIELAELPMLIKLHFPKE 566
           NNKNVV CD+KLR ILLGKPR+ELAELP LIKLHFPKE
Sbjct: 61  NNKNVVICDDKLRSILLGKPRVELAELPALIKLHFPKE 98


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