BLASTX nr result

ID: Papaver23_contig00027777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00027777
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   173   1e-41
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]   173   1e-41
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...   160   8e-38
ref|XP_002318930.1| global transcription factor group [Populus t...   159   2e-37
ref|XP_002330007.1| global transcription factor group [Populus t...   158   4e-37

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  173 bits (438), Expect = 1e-41
 Identities = 94/136 (69%), Positives = 104/136 (76%), Gaps = 1/136 (0%)
 Frame = -2

Query: 407 AYEAALAVFEKDGPELVPNLTKTAGTGIGLEFRESGLNLNAKNDRILKAGMVFNVSPGFQ 228
           AY+AALAV EKD PELV NLTK+AGTGIGLEFRESGLNLNAKNDR+LK GMVFNVS GFQ
Sbjct: 351 AYQAALAVVEKDAPELVSNLTKSAGTGIGLEFRESGLNLNAKNDRVLKPGMVFNVSLGFQ 410

Query: 227 NLQAQTNNPKTEKFSLLLADTVIVKENIPEVVTMISSKPLKDLAYLFN-XXXXXXXXXXX 51
           NLQ  TNNPKT+KFS+LLAD+VIV E  PEVVT ISSK +KD+AY FN            
Sbjct: 411 NLQTDTNNPKTQKFSVLLADSVIVGEKGPEVVTSISSKAVKDVAYSFNEDDDEEEEERPK 470

Query: 50  XXXXPNGSESLLSKAT 3
                NG E++ SKAT
Sbjct: 471 VKPEANGGEAVSSKAT 486


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score =  173 bits (438), Expect = 1e-41
 Identities = 94/136 (69%), Positives = 104/136 (76%), Gaps = 1/136 (0%)
 Frame = -2

Query: 407 AYEAALAVFEKDGPELVPNLTKTAGTGIGLEFRESGLNLNAKNDRILKAGMVFNVSPGFQ 228
           AY+AALAV EKD PELV NLTK+AGTGIGLEFRESGLNLNAKNDR+LK GMVFNVS GFQ
Sbjct: 351 AYQAALAVVEKDAPELVTNLTKSAGTGIGLEFRESGLNLNAKNDRVLKPGMVFNVSLGFQ 410

Query: 227 NLQAQTNNPKTEKFSLLLADTVIVKENIPEVVTMISSKPLKDLAYLFN-XXXXXXXXXXX 51
           NLQ  TNNPKT+KFS+LLAD+VIV E  PEVVT ISSK +KD+AY FN            
Sbjct: 411 NLQTDTNNPKTQKFSVLLADSVIVGEKGPEVVTSISSKAVKDVAYSFNEDDDEEEEERPK 470

Query: 50  XXXXPNGSESLLSKAT 3
                NG E++ SKAT
Sbjct: 471 VKPEANGGEAVSSKAT 486


>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
           gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
           putative [Ricinus communis]
          Length = 1098

 Score =  160 bits (406), Expect = 8e-38
 Identities = 85/134 (63%), Positives = 98/134 (73%)
 Frame = -2

Query: 404 YEAALAVFEKDGPELVPNLTKTAGTGIGLEFRESGLNLNAKNDRILKAGMVFNVSPGFQN 225
           Y AAL+V EKD PEL  NLTKTAGTGIGLEFRESGL+L++KN+RIL+ GMVFNVS GFQN
Sbjct: 350 YLAALSVVEKDAPELAANLTKTAGTGIGLEFRESGLSLSSKNNRILRPGMVFNVSLGFQN 409

Query: 224 LQAQTNNPKTEKFSLLLADTVIVKENIPEVVTMISSKPLKDLAYLFNXXXXXXXXXXXXX 45
           L  +TN PKT+KFS+LLADTVIV E +P+VVT  SSK  KD+AY FN             
Sbjct: 410 LHTETNKPKTQKFSVLLADTVIVGEKLPDVVTSKSSKAFKDVAYSFNEDDDEEEELSKAR 469

Query: 44  XXPNGSESLLSKAT 3
               G E+ LSKAT
Sbjct: 470 VEVKGGEATLSKAT 483


>ref|XP_002318930.1| global transcription factor group [Populus trichocarpa]
           gi|222857306|gb|EEE94853.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1082

 Score =  159 bits (403), Expect = 2e-37
 Identities = 86/135 (63%), Positives = 101/135 (74%)
 Frame = -2

Query: 407 AYEAALAVFEKDGPELVPNLTKTAGTGIGLEFRESGLNLNAKNDRILKAGMVFNVSPGFQ 228
           AY+AAL+V E++ PELVPNL+K+AGTGIGLEFRESGLNLNAKNDR++KA MVFNVS GFQ
Sbjct: 349 AYQAALSVVEEEAPELVPNLSKSAGTGIGLEFRESGLNLNAKNDRVVKAKMVFNVSLGFQ 408

Query: 227 NLQAQTNNPKTEKFSLLLADTVIVKENIPEVVTMISSKPLKDLAYLFNXXXXXXXXXXXX 48
           NLQ Q +NPK   FSLLLADTVIV +  P+VVT  SSK +KD+AY FN            
Sbjct: 409 NLQNQIDNPKIRNFSLLLADTVIVGDQNPDVVTSKSSKAVKDVAYSFN-EGEEEEQKPKA 467

Query: 47  XXXPNGSESLLSKAT 3
               NG E+L+SK T
Sbjct: 468 RAEVNGGENLMSKTT 482


>ref|XP_002330007.1| global transcription factor group [Populus trichocarpa]
           gi|222871432|gb|EEF08563.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1065

 Score =  158 bits (400), Expect = 4e-37
 Identities = 86/135 (63%), Positives = 100/135 (74%)
 Frame = -2

Query: 407 AYEAALAVFEKDGPELVPNLTKTAGTGIGLEFRESGLNLNAKNDRILKAGMVFNVSPGFQ 228
           AY+AAL+V EK+ PELVPNL+K+AGTG+GLEFRESGLNLNAKNDR +KA MV NVS GFQ
Sbjct: 349 AYQAALSVVEKEAPELVPNLSKSAGTGMGLEFRESGLNLNAKNDRAVKAKMVLNVSLGFQ 408

Query: 227 NLQAQTNNPKTEKFSLLLADTVIVKENIPEVVTMISSKPLKDLAYLFNXXXXXXXXXXXX 48
           NLQ QT+NPK   FSLLLADTVIV +  P+VVT  SSK +KD+AY FN            
Sbjct: 409 NLQNQTDNPKIRNFSLLLADTVIVGDQNPDVVTSKSSKAVKDVAYSFN-EGEEEEQKPKA 467

Query: 47  XXXPNGSESLLSKAT 3
               NG E+L+SK T
Sbjct: 468 RAEVNGGENLMSKTT 482


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