BLASTX nr result

ID: Papaver23_contig00027740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00027740
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263215.1| PREDICTED: RING-H2 finger protein ATL60-like...   223   6e-56
emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]   222   1e-55
ref|XP_003627467.1| RING-H2 finger protein ATL3C [Medicago trunc...   196   8e-48
ref|XP_002533814.1| RING-H2 finger protein ATL1M, putative [Rici...   192   9e-47
ref|XP_002326623.1| predicted protein [Populus trichocarpa] gi|2...   182   9e-44

>ref|XP_002263215.1| PREDICTED: RING-H2 finger protein ATL60-like [Vitis vinifera]
          Length = 304

 Score =  223 bits (568), Expect = 6e-56
 Identities = 132/304 (43%), Positives = 173/304 (56%), Gaps = 9/304 (2%)
 Frame = +2

Query: 41  SMEKSKIVDVSSKVMLASXXXXXXXXXXXXXXHFYAKWYWRRRI--GNQNGGTMRRR--F 208
           S++ S  V++S K+M+ +              H YAKW+W R    G+  GG+ RRR  F
Sbjct: 9   SLDDSAAVELSGKIMVVAIIVLFFVVVFVLFLHLYAKWFWWRTADRGSSFGGSRRRRRRF 68

Query: 209 IFTPSQDQNV-TFRQGLAASVMKSLPIVTFSSSEFKDGLECAVCLSEVEEGEKARVLPKC 385
           +F P QD  +   R+GL  S++ S+P++ F   EFKDGLECAVCLSE+  GEKAR+LPKC
Sbjct: 69  VFAPGQDPALPAMRRGLDPSILGSIPVLVFRPEEFKDGLECAVCLSELVTGEKARLLPKC 128

Query: 386 NHGFHVDCIDMWFQSHSTCPLCRNXXXXXXXXXXXXXXXXXXXXXXXXISGXXXXXXGLL 565
           NHGFHV+CIDMWFQSHSTCPLCRN                         +       G  
Sbjct: 129 NHGFHVECIDMWFQSHSTCPLCRNLVATVLSDPTTPQSPESIQLSDESSAA------GDY 182

Query: 566 SVEAAPNYPTNVMFWGNQTRVSTRDSGNEE---TXXXXXXXXXLRPDRPLVIDIPDRLSH 736
           S+E +PNYPTN++FWGNQTRV++     EE   +           PD  LVIDIP + + 
Sbjct: 183 SLE-SPNYPTNILFWGNQTRVTSAGLCLEEGAASSQPPCASPGNGPDGMLVIDIPRQTAE 241

Query: 737 GXXXXXXXXXXXXAGRRVSEDDMKSPVSSRFKSLCKMLSREKRVVPSSP-SVDIEQGEVV 913
                             SE+++KSP+++R +SL ++LSREKRVVP SP SVD+EQG   
Sbjct: 242 NFSSLSPSTGG------TSEEELKSPMTTRLRSLKRLLSREKRVVPCSPGSVDVEQGGRG 295

Query: 914 WSSK 925
            SSK
Sbjct: 296 QSSK 299


>emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]
          Length = 959

 Score =  222 bits (565), Expect = 1e-55
 Identities = 129/297 (43%), Positives = 170/297 (57%), Gaps = 9/297 (3%)
 Frame = +2

Query: 41  SMEKSKIVDVSSKVMLASXXXXXXXXXXXXXXHFYAKWYWRRRI--GNQNGGTMRRR--F 208
           S++ S  V++S K+M+ +              H YAKW+W R    G+  GG+ RRR  F
Sbjct: 9   SLDDSAAVELSGKIMVVAIIVLFFVVVFVLFLHLYAKWFWWRTADRGSSFGGSRRRRRRF 68

Query: 209 IFTPSQDQNV-TFRQGLAASVMKSLPIVTFSSSEFKDGLECAVCLSEVEEGEKARVLPKC 385
           +F P QD  +   R+GL  S++ S+P++ F   EFKDGLECAVCLSE+  GEKAR+LPKC
Sbjct: 69  VFAPGQDPALPAMRRGLDPSILGSIPVLVFRPEEFKDGLECAVCLSELVTGEKARLLPKC 128

Query: 386 NHGFHVDCIDMWFQSHSTCPLCRNXXXXXXXXXXXXXXXXXXXXXXXXISGXXXXXXGLL 565
           NHGFHV+CIDMWFQSHSTCPLCRN                         +       G  
Sbjct: 129 NHGFHVECIDMWFQSHSTCPLCRNLVATVLSDPTTPQSPESIQLSDESSAA------GDY 182

Query: 566 SVEAAPNYPTNVMFWGNQTRVSTRDSGNEE---TXXXXXXXXXLRPDRPLVIDIPDRLSH 736
           S+E +PNYPTN++FWGNQTRV++     EE   +           PD  LVIDIP + + 
Sbjct: 183 SLE-SPNYPTNILFWGNQTRVTSAGLCLEEGAASSQPPCASPGNGPDGMLVIDIPRQTAE 241

Query: 737 GXXXXXXXXXXXXAGRRVSEDDMKSPVSSRFKSLCKMLSREKRVVPSSP-SVDIEQG 904
                             SE+++KSP+++R +SL ++LSREKRVVP SP SVD+EQG
Sbjct: 242 NFSSLSPSTGG------TSEEELKSPMTTRLRSLKRLLSREKRVVPCSPGSVDVEQG 292


>ref|XP_003627467.1| RING-H2 finger protein ATL3C [Medicago truncatula]
           gi|355521489|gb|AET01943.1| RING-H2 finger protein ATL3C
           [Medicago truncatula]
          Length = 321

 Score =  196 bits (498), Expect = 8e-48
 Identities = 117/321 (36%), Positives = 163/321 (50%), Gaps = 25/321 (7%)
 Frame = +2

Query: 20  SNNNNYDSMEKSKIVDVSSKVMLASXXXXXXXXXXXXXXHFYAKWYW----RRRIGNQNG 187
           + N + D++  S  ++++ K+M+ +              H YAKW+W     R +     
Sbjct: 9   ATNGSSDALGDSNRIEITGKIMVLAIIFLFMVVMFVLMLHLYAKWFWWRFEERTVPQPRN 68

Query: 188 GTMRRRFIFTPSQDQNV--TFRQGLAASVMKSLPIVTFSSSEFKDGLECAVCLSEVEEGE 361
              RRRF+F P QD  V  + + GL A ++KSLP++ F + +FKDGLECAVCL +V EGE
Sbjct: 69  RRRRRRFVFAPGQDPVVYGSHQIGLEAKILKSLPVLVFKNEDFKDGLECAVCLCDVVEGE 128

Query: 362 KARVLPKCNHGFHVDCIDMWFQSHSTCPLCRNXXXXXXXXXXXXXXXXXXXXXXXXISGX 541
           K R+LPKCNHGFH+DCIDMWFQSHSTCPLCRN                          G 
Sbjct: 129 KTRLLPKCNHGFHLDCIDMWFQSHSTCPLCRNLVSVESCKPNSTTSNGEEMNVLVSSEGE 188

Query: 542 XXXXXGLLSVEAAPNYPTNVMFWGN-QTRVST-------RDSGNEETXXXXXXXXXLRPD 697
                  L    + N+PTNV+ WGN Q +VS+         S +++          L  D
Sbjct: 189 NLSHVNGLE---SSNFPTNVLVWGNSQRQVSSSFGVSLEEGSSHQQPCSTSSSSSTLGSD 245

Query: 698 R----------PLVIDIPDRLSHGXXXXXXXXXXXXAGRRVSEDDMKSPVSSRFKSLCKM 847
                       LVIDIP                  +  R  ED+MKSP++SR +S  ++
Sbjct: 246 NGNSGRCNGNGMLVIDIP------LPSDFSSSSLSPSDNRYVEDEMKSPMASRLRSFKRL 299

Query: 848 LSREKRVVPSSP-SVDIEQGE 907
           LSR+K+  PS+P S+D+EQG+
Sbjct: 300 LSRDKKFSPSTPSSMDVEQGQ 320


>ref|XP_002533814.1| RING-H2 finger protein ATL1M, putative [Ricinus communis]
           gi|223526251|gb|EEF28567.1| RING-H2 finger protein
           ATL1M, putative [Ricinus communis]
          Length = 281

 Score =  192 bits (489), Expect = 9e-47
 Identities = 117/297 (39%), Positives = 155/297 (52%), Gaps = 18/297 (6%)
 Frame = +2

Query: 44  MEKSKIVDVSSKVMLASXXXXXXXXXXXXXXHFYAKWYWRR---RIGNQNGGTMRRRFIF 214
           ++ S  V+++ ++M+ +              H YAKW+W R        +    RRRF+F
Sbjct: 4   LDDSPTVEITGRIMVIAIIILFMVVVFVLLLHLYAKWFWWRIEEPTSPPHSRRNRRRFVF 63

Query: 215 TPSQDQNVTFRQGLAASVMKSLPIVTFSSSEFKDGLECAVCLSEVEEGEKARVLPKCNHG 394
           TP+QD     R+GL  SV++SLP+V F S +FKDGLECAVCLSE+ +GEKAR+LPKCNHG
Sbjct: 64  TPAQDP---VRRGLDMSVLRSLPVVIFQSEDFKDGLECAVCLSEIAQGEKARLLPKCNHG 120

Query: 395 FHVDCIDMWFQSHSTCPLCRNXXXXXXXXXXXXXXXXXXXXXXXXISGXXXXXXGLLSVE 574
           FHVDCIDMWFQSHSTCPLCRN                         S       G  +  
Sbjct: 121 FHVDCIDMWFQSHSTCPLCRNSVAPQQECSSFDSNDFQESNTQ---SQEEILIPGYST-- 175

Query: 575 AAPNYPTNVMFWGNQTRVSTRDSG--------------NEETXXXXXXXXXLRPDRPLVI 712
            +PN+PTNV+FWG+ T+VST   G              +             R +  LVI
Sbjct: 176 ESPNFPTNVLFWGDLTQVSTGGGGGGGLEEGSSTQATSSSSGSGGSRSSSSRRQEEMLVI 235

Query: 713 DIPDRLSHGXXXXXXXXXXXXAGRRVSEDDMKSPV-SSRFKSLCKMLSREKRVVPSS 880
           DIP + S                   +E++ KSP+ + R +SL ++LSREKRV PSS
Sbjct: 236 DIPLQTSD-----------------YTEEESKSPMPTQRLRSLKRLLSREKRVSPSS 275


>ref|XP_002326623.1| predicted protein [Populus trichocarpa] gi|222833945|gb|EEE72422.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  182 bits (463), Expect = 9e-44
 Identities = 109/295 (36%), Positives = 151/295 (51%), Gaps = 11/295 (3%)
 Frame = +2

Query: 44  MEKSKIVDVSSKVMLASXXXXXXXXXXXXXXHFYAKWYWRR----RIGNQNGGTMRRRFI 211
           ++ S  ++++ KVM+ +              H YAKW+W R        Q+    RRR++
Sbjct: 4   LDDSATMEITGKVMVVAIVILFLVVVFVIFLHLYAKWFWWRIEEPAHPQQSRRRQRRRYV 63

Query: 212 FTPSQDQNVTFRQGLAASVMKSLPIVTFSSSEFKDGLECAVCLSEVEEGEKARVLPKCNH 391
           F P QD     R+GL  S+++SLP+V F   +F  GLECAVCLS+  EGEK R+LPKCNH
Sbjct: 64  FNPGQDP---VRRGLELSILRSLPLVIFQPKDFPGGLECAVCLSDAVEGEKVRLLPKCNH 120

Query: 392 GFHVDCIDMWFQSHSTCPLCRNXXXXXXXXXXXXXXXXXXXXXXXXISGXXXXXXGLLSV 571
           GFH+DCIDMWFQS+STCPLCR+                        I           S+
Sbjct: 121 GFHLDCIDMWFQSYSTCPLCRS---SVAPQAQCASGANNNNDLEVNIQSPEEILISGYSI 177

Query: 572 EAAPNYPTNVMFWGNQTRVSTRDSGNEE-----TXXXXXXXXXLRPDRPLVIDIPDRLSH 736
           E +P++PTNV+FWG+QT VST     EE                R D  LVID+P +++ 
Sbjct: 178 E-SPDFPTNVLFWGDQTLVSTGGGSLEEGPSSSASSAPSSSAGARHDEMLVIDVPVQITD 236

Query: 737 GXXXXXXXXXXXXAGRRVSEDDMKSPVSSRFKSLCKMLSREKRVVP--SSPSVDI 895
                              + + K P  +R +SL ++LSREKR+ P  S+ SVD+
Sbjct: 237 NL---------------AEDQESKLPTPTRLRSLKRLLSREKRLPPNCSNGSVDV 276


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