BLASTX nr result

ID: Papaver23_contig00027506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00027506
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521085.1| DNA binding protein, putative [Ricinus commu...    56   3e-06
ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267...    55   8e-06

>ref|XP_002521085.1| DNA binding protein, putative [Ricinus communis]
            gi|223539654|gb|EEF41236.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2009

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 47/142 (33%), Positives = 64/142 (45%), Gaps = 36/142 (25%)
 Frame = +2

Query: 2    QGQPPAATSGH------NALPPVAMGSGQQQ---------------RPNIHRMLQPHNRQ 118
            QGQ P+  SGH       ALP   M S  Q                +P + RMLQ  NRQ
Sbjct: 1766 QGQVPSVPSGHPLSASHQALPAAIMASNHQHLQPQPQIHQKQTGQAQPTVQRMLQ-QNRQ 1824

Query: 119  MNSDPHTQSTVEQ-----QPSNSRPHIG---------GTESSTNCMPVLSSASNAATQWK 256
            +NSD  T+S  +Q     QP NS P +G             S N +PV++  S+ A+QWK
Sbjct: 1825 LNSDLQTKSQTDQGHKEKQPLNSVPQMGTSTTTSVSQACNDSANVVPVVT--SSVASQWK 1882

Query: 257  GTS-EYNSGMTKSINHLPGVGN 319
                  +S MT S + +  +G+
Sbjct: 1883 PLEPSCDSAMTNSASQVGSIGS 1904


>ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267035 [Vitis vinifera]
          Length = 2022

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 47/138 (34%), Positives = 62/138 (44%), Gaps = 32/138 (23%)
 Frame = +2

Query: 2    QGQPPAATSGHNAL-------PPVAMGSGQQQ--------------RPNIHRMLQPHNRQ 118
            QGQ PA  SGH  L       PP  M S  QQ              +P++ RMLQP NRQ
Sbjct: 1783 QGQVPAVPSGHATLSAPHQVVPPSVMTSNHQQLQMQPSPHHKQVNTQPHVQRMLQP-NRQ 1841

Query: 119  MNSDPHTQSTVEQ-----QPSNSRPHIGGTESSTNCMPVLSSASNA-ATQWKG-----TS 265
             NSD  ++S  +Q     QP N+   +  T  S   M   +  S A A+QWK       S
Sbjct: 1842 ANSDRASKSQTDQARADPQPVNNTSQMSTTAVSQAGMESSTMVSTASASQWKAPESYKES 1901

Query: 266  EYNSGMTKSINHLPGVGN 319
             Y+SG+T     +  +G+
Sbjct: 1902 LYDSGITNPATQVGSIGS 1919


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