BLASTX nr result

ID: Papaver23_contig00027503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00027503
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    51   4e-10
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    55   1e-09
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    55   2e-09
ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus ...    50   2e-08
ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncat...    44   3e-08

>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 51.2 bits (121), Expect(2) = 4e-10
 Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
 Frame = +2

Query: 107 YH--TQQINAYKVISFNELYGDKA--------SSSVEVYSLKSNSWNCYQTVPYKFHLRS 256
           YH  T+     KV+ +   YG  +         S V+V +L S +W     V Y+     
Sbjct: 173 YHPMTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSLGKVSYQLDRWP 232

Query: 257 NEVLVSGALHWFTDTPDRGYSSSIISFDISGENLGEVPQTEELLGYGCTKTMGVLDECLC 436
           +E LV+G LHW T  P R  +  I+SFD++ E   E+P+ +      C   + VL  CL 
Sbjct: 233 SEALVNGRLHWVT-RPRRYVTRFIVSFDLADEQFREIPKPDCGGLSRCNYHLLVLGGCLS 291

Query: 437 A 439
           A
Sbjct: 292 A 292



 Score = 37.7 bits (86), Expect(2) = 4e-10
 Identities = 15/39 (38%), Positives = 27/39 (69%)
 Frame = +1

Query: 1   YDLIGSCNGLVCLWSWSYRSFPCLIWNPATKDYKEIPYS 117
           ++++GSCNGL+CL    ++     + NP T+D+K++P S
Sbjct: 122 FEVVGSCNGLLCLADSLFKD-AVYVHNPFTRDFKQLPKS 159


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 54.7 bits (130), Expect(2) = 1e-09
 Identities = 39/123 (31%), Positives = 51/123 (41%), Gaps = 21/123 (17%)
 Frame = +2

Query: 131 YKVISFNELYGDKASS----SVEVYSLKSNSWNCYQTVPYKFHL-----------RSNEV 265
           YKV+ F   YGD         V+VYSLKSNSW      PY               R   V
Sbjct: 157 YKVVRFIHFYGDSPDGFFHCEVKVYSLKSNSWKRIDDYPYDLRFILPPDYHPRCRRGYGV 216

Query: 266 LVSGALHWFTDTPDRGY---SSSIISFDISGENLGEVPQTEELLGYGCTK---TMGVLDE 427
             + A+HW      +G    S  I++FD+  E    +PQ +    Y   +    +GVL  
Sbjct: 217 FANSAVHWKATVVGKGKENGSDLIVAFDLGAEEFKIIPQPD----YSSNEHEMNVGVLGG 272

Query: 428 CLC 436
           CLC
Sbjct: 273 CLC 275



 Score = 32.7 bits (73), Expect(2) = 1e-09
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +1

Query: 4   DLIGSCNGLVCLWSWSYRSFPCLIWNPATKDYKEIPYS 117
           +++GSCNGL+ L +     F   ++NP+T++ K IP S
Sbjct: 92  EVMGSCNGLLALLN---SDFSIALYNPSTREKKMIPVS 126


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 55.1 bits (131), Expect(2) = 2e-09
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
 Frame = +2

Query: 131 YKVISFNELYG-DKAS--SSVEVYSLKSNSWNCYQTVPY-KFHLRSNEVLVSGALHWF-T 295
           YK++   +  G D+ S  S V+V+SL+ NSW     +PY   +   N +  +GALHW  +
Sbjct: 153 YKLVRIAQFGGVDRKSFESEVKVFSLRKNSWRRIADMPYCVLYPGENGIYANGALHWLVS 212

Query: 296 DTPDRGYSSSIISFDISGENLGEVPQTEELLGYGCTKTMGVLDECL 433
             PD   + +I++ D+  E+   VP+  E +   C   +GVL  CL
Sbjct: 213 QDPDSTVADTIVALDLGVEDYHVVPK-PEFVDMNCNMGVGVLQGCL 257



 Score = 31.6 bits (70), Expect(2) = 2e-09
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +1

Query: 7   LIGSCNGLVCLWSWSYRSFPCLIWNPATKDYKEIPY 114
           ++GSCNGL+C+ +         +WNP+ + ++ +PY
Sbjct: 91  ILGSCNGLLCICN---IVDDIALWNPSIRAHRVVPY 123


>ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223543895|gb|EEF45421.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 358

 Score = 50.1 bits (118), Expect(2) = 2e-08
 Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
 Frame = +2

Query: 110 HTQQINAYKVISFNELYGDKASSSVEVYSLKSNSWNCYQTVPYKFHLRSNEVLVSGALHW 289
           +   IN YK++  +          V VYS+K NSW      PY        + ++GA+HW
Sbjct: 153 YAHSINDYKLVKIS------CRGCVFVYSVKENSWRSVGGFPYSILALDPGIQLNGAIHW 206

Query: 290 FTDTPDRGYSSSII-SFDISGENLGEVPQTEELLG-YGCTKTMGVLDECLC 436
                     S II +FD+  E   +VP    +   YG    +GV  ECLC
Sbjct: 207 VVSRSKDSTKSQIIGAFDLVEEKFWDVPPPVSVHNFYG----IGVFGECLC 253



 Score = 33.5 bits (75), Expect(2) = 2e-08
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = +1

Query: 10  IGSCNGLVCLWSWSYRSFPCLIWNPATKDYKEIPYSTNKR 129
           IGSCNGL+C+ S        L+ NP+T+  +EIP   N+R
Sbjct: 102 IGSCNGLLCVAS---EPGVLLLLNPSTRAAQEIPRLGNRR 138


>ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487555|gb|AES68758.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 382

 Score = 44.3 bits (103), Expect(2) = 3e-08
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = +1

Query: 1   YDLIGSCNGLVCLWSWSYRSFPCLIWNPATKDYKEIP 111
           Y  IGSCNG+VCL    Y S   + WNP+T+ +KE+P
Sbjct: 119 YRFIGSCNGIVCLADNEYTSL-VICWNPSTRKFKELP 154



 Score = 38.5 bits (88), Expect(2) = 3e-08
 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
 Frame = +2

Query: 149 NELYGDKASSSVEVYSLKSNSWNCYQTVPY---KFHLRSNEVLVSGALHWFTDTPDRGYS 319
           +E Y     + V V++L +N W   Q  P+      ++  E  VSG ++W          
Sbjct: 191 DEDYSFVNKTQVMVHTLGTNIWRTIQEYPFGGLPVPVKKGE-FVSGTINWLFSEESLECP 249

Query: 320 SSIISFDISGENLGEV-PQTEELLGYGCTKTMGVLDECLC 436
             I+SFD++ E+  ++ P     +  G    +GVL +CLC
Sbjct: 250 CFIVSFDLAKESYQKISPPNLGGVDVGDLSVLGVLRDCLC 289


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