BLASTX nr result

ID: Papaver23_contig00027483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00027483
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_198999.1| putative F-box/LRR-repeat protein [Arabidopsis ...    59   4e-07
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               57   1e-06
ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    57   3e-06

>ref|NP_198999.1| putative F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75262537|sp|Q9FJ30.1|FBL88_ARATH RecName:
           Full=Putative F-box/LRR-repeat protein At5g41840
           gi|10177368|dbj|BAB10659.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007352|gb|AED94735.1|
           putative F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 540

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
 Frame = +2

Query: 110 EDDGLRGCTLKVHAPNLETFDYYGSIAKEYVLTTFPLLVKAAVQFRFIPYAATREQRIGH 289
           E++   G +L    PNL   +Y   I  +Y   +F  LV+A ++ R  P     +Q    
Sbjct: 259 EENINEGVSLSFDNPNLVYLEYSDVIVDKYKQVSFDSLVEANLRLRKTP-----DQDETD 313

Query: 290 GEAISQFLRAIANVKHLYVSDDTLQALSFADDLLEKLPTCHNTKKLTI----FDEVTALV 457
              +++ L  I NVK LY+SDDTL+ LS      E++P   N  +LTI    +    +L 
Sbjct: 314 KVNVTKLLMGIHNVKILYLSDDTLEVLSCC---RERIPVFDNLLELTIKTTPYVGWKSLP 370

Query: 458 ALLKATPNLESLVFD 502
            LLK+ P+LE+LVF+
Sbjct: 371 PLLKSCPSLETLVFE 385


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
 Frame = +2

Query: 44  KCCSVDEEVKIDNW--EDEWFPRGEDDGLRGCT-------LKVHAPNLETFDYYGSIAKE 196
           K C V EE+ I+ W  +++W        L+          L V APNLE       ++++
Sbjct: 148 KLCPVLEELVIERWRLDEQWVFNVSAPTLKSLAIYFSKYKLVVDAPNLEYLSITDFVSED 207

Query: 197 YVLTTFPLLVKAAVQFRFIPYAATREQRIGHGEAISQFLRAIANVKHLYVSDDTLQALSF 376
           Y+++    LVKA V     P     + +I +   I + LR I+NVKHL +S +TL +LS 
Sbjct: 208 YLMSNLSSLVKAYVNVG--PTIRGIDDQILYRGRIYELLRGISNVKHLSLSGETLHSLSG 265

Query: 377 ADDLLEKLPTCHNTKKLTIFDE----VTALVALLKATPNLESLVFD 502
                E LP  H+  +L +  +    +  L   L  +PNLE L+ +
Sbjct: 266 MFCGYE-LPAFHSVTRLELEVDYGYGLEFLKEFLDTSPNLEILILE 310


>ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75249810|sp|Q94B46.1|FBL74_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g14096
           gi|14596145|gb|AAK68800.1| Unknown protein [Arabidopsis
           thaliana] gi|22136112|gb|AAM91134.1| unknown protein
           [Arabidopsis thaliana] gi|332657971|gb|AEE83371.1|
           F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 468

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
 Frame = +2

Query: 134 TLKVHAPNLETFDYYGSIAKEYVLTTFPLLVKAAVQFRFIPYAATREQRIGHGEAI---S 304
           ++ +  PNL    +  ++A +Y    F  LV+A +  R +       Q  G  + +   +
Sbjct: 226 SVSIDTPNLVYLKFTDTVAGKYPKVNFDSLVEAHIDLRLLQ----GHQGYGENDMVGNAT 281

Query: 305 QFLRAIANVKHLYVSDDTLQALSFADDLLEKLPTCHNTKKLTIFDEV----TALVALLKA 472
            F+  I NVK LY+S +TLQ L+++ D    +P  +N   LTI         +L  LLK 
Sbjct: 282 DFIMRICNVKTLYLSSNTLQVLTYSCD---AIPIFNNLTHLTIESNPEVGWQSLPGLLKN 338

Query: 473 TPNLESLVF 499
           +PNLE+L+F
Sbjct: 339 SPNLETLIF 347


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