BLASTX nr result

ID: Papaver23_contig00027194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00027194
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329763.1| predicted protein [Populus trichocarpa] gi|2...    82   2e-13
ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma...    76   1e-11
ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-11
ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal doma...    75   2e-11
ref|XP_002519032.1| double-stranded RNA binding protein, putativ...    75   2e-11

>ref|XP_002329763.1| predicted protein [Populus trichocarpa] gi|222870825|gb|EEF07956.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 45/80 (56%), Positives = 51/80 (63%)
 Frame = +3

Query: 27  EAYAQVEIGGQVFGNGNGSTLDXXXXXXXXXXLMNLKVKLGLDTHKRIGSPRSLQAAVPN 206
           E +AQVEI GQV G G GST D          L +L+   G  T KR GSPR +Q  +PN
Sbjct: 138 EVHAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRTMFGQYTQKRQGSPRPMQ-GMPN 196

Query: 207 KRFKPEFPRVLQRIPPSARY 266
           KR K EFPRVLQR+PPSARY
Sbjct: 197 KRLKQEFPRVLQRMPPSARY 216


>ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 958

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 43/88 (48%), Positives = 51/88 (57%)
 Frame = +3

Query: 3    STSLNYKGEAYAQVEIGGQVFGNGNGSTLDXXXXXXXXXXLMNLKVKLGLDTHKRIGSPR 182
            ST    K E +AQVEI GQ+FG G G T +          L +L+      T KR GSPR
Sbjct: 864  STHFAQKDEVHAQVEIDGQIFGKGFGLTWEEAKMQAAKKALESLRTMFNQGTRKRHGSPR 923

Query: 183  SLQAAVPNKRFKPEFPRVLQRIPPSARY 266
            S+Q  + NKR K E+PR LQRIP SARY
Sbjct: 924  SMQ-GLANKRLKQEYPRTLQRIPYSARY 950


>ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|222847981|gb|EEE85528.1|
            predicted protein [Populus trichocarpa]
          Length = 967

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 43/80 (53%), Positives = 49/80 (61%)
 Frame = +3

Query: 27   EAYAQVEIGGQVFGNGNGSTLDXXXXXXXXXXLMNLKVKLGLDTHKRIGSPRSLQAAVPN 206
            E +AQVEI GQV G G G T D          L +L+   G  T KR GSPR +Q  +PN
Sbjct: 881  EVHAQVEIDGQVLGKGIGLTWDEAKMQAAEKALGSLRTMFGQYTPKRQGSPRLMQ-GMPN 939

Query: 207  KRFKPEFPRVLQRIPPSARY 266
            KR K EFPRVLQR+P SARY
Sbjct: 940  KRLKQEFPRVLQRMPSSARY 959


>ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 960

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 42/88 (47%), Positives = 52/88 (59%)
 Frame = +3

Query: 3    STSLNYKGEAYAQVEIGGQVFGNGNGSTLDXXXXXXXXXXLMNLKVKLGLDTHKRIGSPR 182
            ST L  K E +AQVEI GQ+FG G G T +          L +L+      + KR GSPR
Sbjct: 866  STHLTQKDEVHAQVEIDGQIFGKGFGVTWEEAKMQAAKKALGSLRTMFNQGSLKRHGSPR 925

Query: 183  SLQAAVPNKRFKPEFPRVLQRIPPSARY 266
            S+Q  + NKR KPE+P  LQR+P SARY
Sbjct: 926  SMQ-GLANKRLKPEYPPTLQRVPYSARY 952


>ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
            gi|223541695|gb|EEF43243.1| double-stranded RNA binding
            protein, putative [Ricinus communis]
          Length = 978

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 42/80 (52%), Positives = 48/80 (60%)
 Frame = +3

Query: 27   EAYAQVEIGGQVFGNGNGSTLDXXXXXXXXXXLMNLKVKLGLDTHKRIGSPRSLQAAVPN 206
            E +AQVEI GQV G G GST D          L +L+   G    KR GSPR +   +PN
Sbjct: 892  EVHAQVEIDGQVMGKGIGSTFDEAKMQAAEKALGSLRTTFGRFPPKRQGSPRPVPG-MPN 950

Query: 207  KRFKPEFPRVLQRIPPSARY 266
            K  KPEFPRVLQR+P SARY
Sbjct: 951  KHLKPEFPRVLQRMPSSARY 970


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