BLASTX nr result

ID: Papaver23_contig00027142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00027142
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|2...    73   1e-10
ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [...    73   1e-10
ref|XP_004136275.1| PREDICTED: pre-rRNA-processing protein TSR2 ...    72   2e-10
gb|AAS79569.1| hypothetical protein [Ipomoea trifida] gi|1171659...    71   4e-10
ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|2...    70   9e-10

>ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|222838085|gb|EEE76450.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 45/130 (34%), Positives = 67/130 (51%)
 Frame = +2

Query: 215 SDHQLAPQASSLFAEGICHILSHWVTLVIEVAEQIGVPSTEITEYLTRSRGKFMSDKVKQ 394
           S  QL   + S F EGIC ILS W  L + V  + G              G+      +Q
Sbjct: 18  SSKQLTADSISQFREGICLILSKWSALQLAVENEWG--------------GRGSGLLAEQ 63

Query: 395 LAADIFMWFAQSKDERQVKSLGYLIQETVRSKFKCSVGDGSTILVSSKLKMLHQELVQGN 574
           LA+DI  WF QSK+   +  L  ++ E + S     + DGS   V+ KL ++H+E ++GN
Sbjct: 64  LASDILSWFTQSKEPLFIDDLEGILDEAMLS-LNTMIDDGSIEEVAEKLMIMHEECLEGN 122

Query: 575 YKSIEELRQS 604
           Y SI++LR++
Sbjct: 123 YSSIQKLREA 132


>ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [Ricinus communis]
           gi|223548223|gb|EEF49714.1| Pre-rRNA-processing protein
           TSR2, putative [Ricinus communis]
          Length = 213

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 45/132 (34%), Positives = 66/132 (50%)
 Frame = +2

Query: 224 QLAPQASSLFAEGICHILSHWVTLVIEVAEQIGVPSTEITEYLTRSRGKFMSDKVKQLAA 403
           QL P++  LF EGI  ILS W  L + V  + G              G+       Q+  
Sbjct: 18  QLPPESVPLFQEGIFLILSRWSALQLAVENEWG--------------GRGSRQLADQIGF 63

Query: 404 DIFMWFAQSKDERQVKSLGYLIQETVRSKFKCSVGDGSTILVSSKLKMLHQELVQGNYKS 583
           DIF WF QSK+   +  L  ++ E + S     + DGS   V+ KL ++H+E ++GNY +
Sbjct: 64  DIFSWFTQSKEPLYIDDLENILDEGMIS-LNTMIEDGSVEEVAEKLMIMHEECLEGNYHT 122

Query: 584 IEELRQSTSWIG 619
           IE+LRQ+    G
Sbjct: 123 IEQLRQARPTAG 134


>ref|XP_004136275.1| PREDICTED: pre-rRNA-processing protein TSR2 homolog [Cucumis
           sativus] gi|449496991|ref|XP_004160283.1| PREDICTED:
           pre-rRNA-processing protein TSR2 homolog [Cucumis
           sativus]
          Length = 193

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 46/126 (36%), Positives = 64/126 (50%)
 Frame = +2

Query: 227 LAPQASSLFAEGICHILSHWVTLVIEVAEQIGVPSTEITEYLTRSRGKFMSDKVKQLAAD 406
           L   A  LF EGI  +LS W  L + V  + G              G+    KV+ L A+
Sbjct: 9   LPAHAFPLFQEGIGLVLSRWSALQLAVENEWG--------------GRDSRRKVELLCAE 54

Query: 407 IFMWFAQSKDERQVKSLGYLIQETVRSKFKCSVGDGSTILVSSKLKMLHQELVQGNYKSI 586
           IF WF Q+K++  +  L  ++ E + S     V DGS   V+ KL ++H+E V GN+ SI
Sbjct: 55  IFTWFTQNKEQLYIDDLEIILDEAMLS-LSTQVDDGSIEEVAEKLIIMHEECVDGNFSSI 113

Query: 587 EELRQS 604
           E LRQS
Sbjct: 114 ERLRQS 119


>gb|AAS79569.1| hypothetical protein [Ipomoea trifida] gi|117165980|dbj|BAF36282.1|
           hypothetical protein [Ipomoea trifida]
          Length = 201

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 40/127 (31%), Positives = 69/127 (54%)
 Frame = +2

Query: 224 QLAPQASSLFAEGICHILSHWVTLVIEVAEQIGVPSTEITEYLTRSRGKFMSDKVKQLAA 403
           QL  +A +   EGI  +LS W +L + VA + G              G+    K ++L+ 
Sbjct: 10  QLTVEAEAQLQEGINLVLSRWASLQMAVANEWG--------------GRGSHQKSQELSE 55

Query: 404 DIFMWFAQSKDERQVKSLGYLIQETVRSKFKCSVGDGSTILVSSKLKMLHQELVQGNYKS 583
            IF +F QSK++  +  L  ++ E + S F   VGDGS   V+ K+ ++H++  +GN++S
Sbjct: 56  RIFSFFTQSKEQVYIDDLEEILDEFMLSDFNTEVGDGSIEEVAEKMMIMHEQCTEGNFES 115

Query: 584 IEELRQS 604
           I EL+++
Sbjct: 116 INELKRT 122


>ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|222857990|gb|EEE95537.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 46/132 (34%), Positives = 67/132 (50%)
 Frame = +2

Query: 224 QLAPQASSLFAEGICHILSHWVTLVIEVAEQIGVPSTEITEYLTRSRGKFMSDKVKQLAA 403
           QL   + S F EGI  ILS W  L + V  + G             RG  +    +QLA+
Sbjct: 20  QLTADSISQFREGIRLILSKWSALQLAVENEWG------------GRGSHLL--AEQLAS 65

Query: 404 DIFMWFAQSKDERQVKSLGYLIQETVRSKFKCSVGDGSTILVSSKLKMLHQELVQGNYKS 583
           DIF WF QSK+   +  L  ++ E + S     + DGS   V+ KL ++H+E ++GNY S
Sbjct: 66  DIFSWFTQSKEPLYIDDLESIMDEAMLS-LNTMIEDGSVEEVAEKLMIMHEECLEGNYSS 124

Query: 584 IEELRQSTSWIG 619
           I++LR     +G
Sbjct: 125 IQKLRDEGPRMG 136


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