BLASTX nr result

ID: Papaver23_contig00027117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00027117
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein...    65   6e-09
ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854...    63   2e-08
ref|XP_002305685.1| PAF1 complex component [Populus trichocarpa]...    63   2e-08
gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryz...    62   6e-08
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...    62   6e-08

>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
           sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA
           polymerase-associated protein RTF1 homolog [Cucumis
           sativus]
          Length = 660

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/33 (90%), Positives = 33/33 (100%)
 Frame = -2

Query: 499 IEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 401
           IEATVG++VPENDGRRH+LTLTVSDYKRRRGLL
Sbjct: 628 IEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660


>ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854406 [Vitis vinifera]
          Length = 493

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = -2

Query: 499 IEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 401
           IEATVG RVPENDGRRH+LTLTV DYKRRRGLL
Sbjct: 461 IEATVGCRVPENDGRRHALTLTVGDYKRRRGLL 493


>ref|XP_002305685.1| PAF1 complex component [Populus trichocarpa]
           gi|222848649|gb|EEE86196.1| PAF1 complex component
           [Populus trichocarpa]
          Length = 662

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = -2

Query: 499 IEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 401
           IEATVG RVPENDGRRH+LTLTV DYKRRRGLL
Sbjct: 630 IEATVGCRVPENDGRRHALTLTVGDYKRRRGLL 662


>gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryza sativa Japonica
           Group] gi|77556035|gb|ABA98831.1| Plus-3 domain
           containing protein, expressed [Oryza sativa Japonica
           Group] gi|215697432|dbj|BAG91426.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 522

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -2

Query: 499 IEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 401
           IEAT+G +VP+NDGRRH+LTLTVSDYKRRRGLL
Sbjct: 490 IEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 522


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
           max]
          Length = 656

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = -2

Query: 499 IEATVGKRVPENDGRRHSLTLTVSDYKRRRGLL 401
           IEATVG RV ENDGRRH+LTLTVSDYKRRRGLL
Sbjct: 624 IEATVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


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