BLASTX nr result

ID: Papaver23_contig00027090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00027090
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17868.3| unnamed protein product [Vitis vinifera]               78   9e-13
ref|NP_001031674.1| protein OSB2 [Arabidopsis thaliana] gi|33265...    71   8e-11
ref|NP_567593.1| protein OSB2 [Arabidopsis thaliana] gi|25951776...    71   8e-11
ref|NP_564370.1| protein OSB4 [Arabidopsis thaliana] gi|75334520...    71   1e-10
gb|AAM63642.1| unknown [Arabidopsis thaliana]                          71   1e-10

>emb|CBI17868.3| unnamed protein product [Vitis vinifera]
          Length = 263

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 60/185 (32%), Positives = 75/185 (40%), Gaps = 44/185 (23%)
 Frame = -2

Query: 423 KPFIKTLSSQSTINRILNRVLVL-----------------------------------QK 349
           + F+K LSS ST NR+L  +L                                     Q 
Sbjct: 6   RTFVKLLSSPSTRNRVLLPLLTTLNQSSSSSSSSSLFCHFTAAASAQKYPSRKYKAAQQS 65

Query: 348 SQHYSTSPKDPESVSKSRD-------WPRPNTIPWQSKVANLVNLVXXXXXXXXXXXXXX 190
           S   S S  +P +    RD       WPRP+ IPWQ+KV N VNL+              
Sbjct: 66  SSLLSASVIEPSAEDHPRDRGAPSGDWPRPSEIPWQAKVCNSVNLIGKVHA--------- 116

Query: 189 XXXXXXXXXXXXXXPIKFQESDDGKFWAGTTISQGE--ADGSTAIEIPIIFEGHLAQTAA 16
                         P++FQ+S DGK WA T I+Q    A  S A+ IP+ FEG LA  A 
Sbjct: 117 --------------PVQFQQSSDGKCWAVTVIAQDADAASHSPALWIPLTFEGDLAYIAV 162

Query: 15  CHLKE 1
           CHLKE
Sbjct: 163 CHLKE 167


>ref|NP_001031674.1| protein OSB2 [Arabidopsis thaliana] gi|332658861|gb|AEE84261.1|
           protein OSB2 [Arabidopsis thaliana]
          Length = 371

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
 Frame = -2

Query: 354 QKSQHYSTSPKDPESVSKSR-------------DWPRPNTIPWQSKVANLVNLVXXXXXX 214
           ++ Q      K PE+V+  +             + PRPN I ++S+VAN VNL+      
Sbjct: 51  ERKQRAKAPAKTPEAVTPVKPLEIASVTATTENELPRPNEIAYESEVANWVNLIGFVDQ- 109

Query: 213 XXXXXXXXXXXXXXXXXXXXXXPIKFQESDDGKFWAGTTISQGEADGSTAIEIPIIFEGH 34
                                 P++F+ S DGKFWAGT ISQ  A  S+   IPIIFEG 
Sbjct: 110 ----------------------PVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFEGD 147

Query: 33  LAQTAACHLKE 1
           LA+TAA ++ +
Sbjct: 148 LAKTAARYVSK 158


>ref|NP_567593.1| protein OSB2 [Arabidopsis thaliana]
           gi|259517764|sp|Q8GXH3.2|OSB2_ARATH RecName:
           Full=Protein OSB2, chloroplastic; AltName:
           Full=Organellar single-stranded DNA-binding protein 2;
           AltName: Full=Protein FLORAL ABSCISSION ASSOCIATED;
           AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE
           9; Flags: Precursor gi|2827655|emb|CAA16609.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|7268796|emb|CAB79001.1| hypothetical protein
           [Arabidopsis thaliana] gi|111074390|gb|ABH04568.1|
           At4g20010 [Arabidopsis thaliana]
           gi|332658860|gb|AEE84260.1| protein OSB2 [Arabidopsis
           thaliana]
          Length = 371

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
 Frame = -2

Query: 354 QKSQHYSTSPKDPESVSKSR-------------DWPRPNTIPWQSKVANLVNLVXXXXXX 214
           ++ Q      K PE+V+  +             + PRPN I ++S+VAN VNL+      
Sbjct: 51  ERKQRAKAPAKTPEAVTPVKPLEIASVTATTENELPRPNEIAYESEVANWVNLIGFVDQ- 109

Query: 213 XXXXXXXXXXXXXXXXXXXXXXPIKFQESDDGKFWAGTTISQGEADGSTAIEIPIIFEGH 34
                                 P++F+ S DGKFWAGT ISQ  A  S+   IPIIFEG 
Sbjct: 110 ----------------------PVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFEGD 147

Query: 33  LAQTAACHLKE 1
           LA+TAA ++ +
Sbjct: 148 LAKTAARYVSK 158


>ref|NP_564370.1| protein OSB4 [Arabidopsis thaliana]
           gi|75334520|sp|Q9FYJ2.1|OSB4_ARATH RecName: Full=Protein
           OSB4, chloroplastic; AltName: Full=Organellar
           single-stranded DNA-binding protein 4; Flags: Precursor
           gi|9755375|gb|AAF98182.1|AC000107_5 F17F8.7 [Arabidopsis
           thaliana] gi|332193185|gb|AEE31306.1| protein OSB4
           [Arabidopsis thaliana]
          Length = 360

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
 Frame = -2

Query: 402 SSQSTINRILNRVLVLQKSQHYSTSPKDPESVSK-----------SRDWPRPNTIPWQSK 256
           S + ++N    +  VL   Q  STS  +  S ++           S +WPRP  +P+Q K
Sbjct: 11  SIRPSLNSTARKSWVLSSQQFLSTSSTESSSRTRGGGGGNRAEKSSEEWPRPMEVPYQPK 70

Query: 255 VANLVNLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKFQESDDGKFWAGTTIS----- 91
           +AN ++L+                            P++F  + DGKFWAGT IS     
Sbjct: 71  IANSIDLIGYVHQ-----------------------PVQFDSTLDGKFWAGTVISHEPSS 107

Query: 90  --QGEADGSTAIEIPIIFEGHLAQTAACHLKE 1
             + E+D S+   IP++FEG LA TA  +LK+
Sbjct: 108 DSKSESDSSSNFWIPVLFEGDLAHTANSYLKK 139


>gb|AAM63642.1| unknown [Arabidopsis thaliana]
          Length = 360

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
 Frame = -2

Query: 402 SSQSTINRILNRVLVLQKSQHYSTSPKDPESVSK-----------SRDWPRPNTIPWQSK 256
           S + ++N    +  VL   Q  STS  +  S ++           S +WPRP  +P+Q K
Sbjct: 11  SIRPSLNSTARKSWVLSSQQFLSTSSTESSSRTRGGGGGNRAEKSSEEWPRPMEVPYQPK 70

Query: 255 VANLVNLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKFQESDDGKFWAGTTIS----- 91
           +AN ++L+                            P++F  + DGKFWAGT IS     
Sbjct: 71  IANSIDLIGYVHQ-----------------------PVQFDSTLDGKFWAGTVISHEPSS 107

Query: 90  --QGEADGSTAIEIPIIFEGHLAQTAACHLKE 1
             + E+D S+   IP++FEG LA TA  +LK+
Sbjct: 108 DSKSESDSSSNFWIPVLFEGDLAHTANSYLKK 139


Top