BLASTX nr result

ID: Papaver23_contig00026826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026826
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538371.1| PREDICTED: FACT complex subunit SPT16-like [...    76   2e-12
ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [...    76   3e-12
emb|CAN64798.1| hypothetical protein VITISV_017317 [Vitis vinifera]    76   3e-12
ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like i...    75   5e-12
ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncat...    75   7e-12

>ref|XP_003538371.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1068

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 6/158 (3%)
 Frame = +3

Query: 6    LLQFHFHHPIMVGTEKTTDIQFHL----MPTSVGQERSDTYTSGDRDKDLADFVRRIGMV 173
            LL FH H+ IMVG +KT D+QF++    M  +VG  +  TY   + +++  +  R+   +
Sbjct: 740  LLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNVGGGKRSTYDPDELEEEQRERQRK-NKI 798

Query: 174  RWDSQGYFPRVEHLNKCELYGVPPSNKCELYGVLPSYDKELTTFPVGASAVFALTFQALL 353
              + Q +  RV      +L+G P  N  +L    P  +      P  +S     T   L+
Sbjct: 799  NVEFQTFVNRVN-----DLWGQPQFNGLDLEFDQPLRELGFPGVPHKSSVFIVPTSACLV 853

Query: 354  LLVAIPFIVIPLDDIEIVNLAKLESGE--IDMTVVFKD 461
             L+  PF+V+ L +IEIVNL ++  G+   DMTVVFKD
Sbjct: 854  ELIETPFLVVTLSEIEIVNLERVGLGQKNFDMTVVFKD 891


>ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1083

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 6/158 (3%)
 Frame = +3

Query: 6    LLQFHFHHPIMVGTEKTTDIQFHL----MPTSVGQERSDTYTSGDRDKDLADFVRRIGMV 173
            L+ FH H+ IMVGT+KT D+QF++    +  ++G  +   Y   + +++  +  R+   V
Sbjct: 736  LIHFHLHNHIMVGTKKTKDVQFYVEVMDVVQTLGSGKRSAYDPDEIEEEQRERDRK-NKV 794

Query: 174  RWDSQGYFPRVEHLNKCELYGVPPSNKCELYGVLPSYDKELTTFPVGASAVFALTFQALL 353
              D Q +  RV      +L+G P  +  +L    P  +      P  +SA    T   L+
Sbjct: 795  NMDFQSFVNRVN-----DLWGQPQFSGLDLEFDQPLRELGFHGVPYKSSAFIVPTSSCLV 849

Query: 354  LLVAIPFIVIPLDDIEIVNLAKLESGE--IDMTVVFKD 461
             L+  PF+VI L +IEIVNL ++  G+   DMT+VFKD
Sbjct: 850  ELIETPFLVITLAEIEIVNLERVGLGQKNFDMTIVFKD 887


>emb|CAN64798.1| hypothetical protein VITISV_017317 [Vitis vinifera]
          Length = 1083

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 6/158 (3%)
 Frame = +3

Query: 6    LLQFHFHHPIMVGTEKTTDIQFHL----MPTSVGQERSDTYTSGDRDKDLADFVRRIGMV 173
            L+ FH H+ IMVGT+KT D+QF++    +  ++G  +   Y   + +++  +  R+   V
Sbjct: 736  LIHFHLHNHIMVGTKKTKDVQFYVEVMDVVQTLGSGKRSAYDPDEIEEEQRERDRK-NKV 794

Query: 174  RWDSQGYFPRVEHLNKCELYGVPPSNKCELYGVLPSYDKELTTFPVGASAVFALTFQALL 353
              D Q +  RV      +L+G P  +  +L    P  +      P  +SA    T   L+
Sbjct: 795  NMDFQSFVNRVN-----DLWGQPQFSGLDLEFDQPLRELGFHGVPYKSSAFIVPTSSCLV 849

Query: 354  LLVAIPFIVIPLDDIEIVNLAKLESGE--IDMTVVFKD 461
             L+  PF+VI L +IEIVNL ++  G+   DMT+VFKD
Sbjct: 850  ELIETPFLVITLAEIEIVNLERVGLGQKNFDMTIVFKD 887


>ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like isoform 1 [Glycine max]
            gi|356539783|ref|XP_003538373.1| PREDICTED: FACT complex
            subunit SPT16-like isoform 2 [Glycine max]
          Length = 1069

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
 Frame = +3

Query: 6    LLQFHFHHPIMVGTEKTTDIQFHL----MPTSVGQERSDTYTSGDRDKDLADFVRRIGMV 173
            LL FH H+ IMVG +KT D+QF++    M  +VG  +   Y   + +++  +  R+   +
Sbjct: 740  LLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNVGSGKRSAYDPDELEEEQRERQRK-NKI 798

Query: 174  RWDSQGYFPRVEHLNKCELYGVPPSNKCELYGVLPSYDKELTTFPVGASAVFALTFQALL 353
              + Q +  RV      +L+G P  N  +L    P  +      P  +S     T   L+
Sbjct: 799  NVEFQTFVNRVN-----DLWGQPQFNGLDLEFDQPLRELGFPGVPHKSSVFIVPTSACLV 853

Query: 354  LLVAIPFIVIPLDDIEIVNLAKLESGE--IDMTVVFKD 461
             L+  PF+V+ L +IEIVNL ++  G+   DMTVVFKD
Sbjct: 854  ELIETPFLVVTLSEIEIVNLERVGLGQKNFDMTVVFKD 891


>ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncatula]
            gi|355489677|gb|AES70880.1| FACT complex subunit SPT16
            [Medicago truncatula]
          Length = 1066

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
 Frame = +3

Query: 6    LLQFHFHHPIMVGTEKTTDIQFHL----MPTSVGQERSDTYTSGDRDKDLADFVRRIGMV 173
            LL FH H+ IMVG +KT D+QF++    M  +VG  +   Y   + +++  +  R+   +
Sbjct: 739  LLHFHLHNHIMVGNKKTKDVQFYVEVMDMVQNVGGGKRSAYDPDELEEEQRERERK-NKI 797

Query: 174  RWDSQGYFPRVEHLNKCELYGVPPSNKCELYGVLPSYDKELTTFPVGASAVFALTFQALL 353
              + Q +  RV      +L+G P  N  +L    P  +      P  +S     T   L+
Sbjct: 798  NVEFQSFVNRVN-----DLWGQPQFNGLDLEFDQPLRELGFPGVPHKSSVFIVPTSACLV 852

Query: 354  LLVAIPFIVIPLDDIEIVNLAKLESGE--IDMTVVFKD 461
             L+  PF+V+ L +IEIVNL ++  G+   DMT+VFKD
Sbjct: 853  ELIETPFLVVTLSEIEIVNLERVGLGQKNFDMTIVFKD 890


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