BLASTX nr result

ID: Papaver23_contig00026805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026805
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889207.1| F-box family protein [Arabidopsis lyrata sub...    60   1e-07
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    57   2e-06
ref|NP_177996.1| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    57   2e-06
ref|XP_003599952.1| FBD-associated F-box protein [Medicago trunc...    56   3e-06
ref|NP_177997.1| putative F-box/FBD/LRR-repeat protein [Arabidop...    55   6e-06

>ref|XP_002889207.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335048|gb|EFH65466.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 451

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 9/170 (5%)
 Frame = +3

Query: 3   PKYISFPRLKCLKLHLFKFTDESWNEELFSNSRVLEELILDQCSVSMNFFCISIPTLKLL 182
           P++IS P +K ++L + KF +    E+L S+   LE LI+ + SV  +   + + +  LL
Sbjct: 158 PQFISLPLVKAIELDIVKFANALVLEKLISSCSALESLIISRSSVD-DIDVLRVRSRSLL 216

Query: 183 KIDNWITKGNGLCDCILKIDAPRLVTFLYTSPVAKEFLLSNFPALEEAIIDICFE----- 347
           +  +     +G   C + IDAP+L     +     +F + N  +L EA I+I F      
Sbjct: 217 RFKHIGNCSDGWDGCEVAIDAPKLEYLNISDHSTAKFRIKNSGSLVEANINIIFNMEELP 276

Query: 348 EYDGAELSRLLRAF----AHVKYLNVCNQTIKVIYSDHDLSNNWPTFHNV 485
           + +     +++R F    + VK L + + T++VI+   D S   P FHN+
Sbjct: 277 DPNNRPKRKMIRDFLAEISTVKTLFISSHTLEVIF---DSSCELPVFHNL 323


>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
 Frame = +3

Query: 3   PKYISFPRLKCLKLHLFKFTDESWNEELFSNSRVLEELILDQCS-VSMNFFCISIPTLKL 179
           P  I FP LK L      FT+E   + LFS   VL++L  ++C  V++N   ++IPTLK 
Sbjct: 165 PDGICFPSLKILSFAHVTFTNEKSAQRLFSGCPVLQDLSFEKCYWVNIN-ISVAIPTLKK 223

Query: 180 LKIDNWITKGNGLCDCILKIDAPRLVTFLYTSPVAKEFLLSNFPALEEAIIDICFEEYDG 359
           L I  + +       C+ KIDA  L++  Y S       L N  ++ +A ID+ F     
Sbjct: 224 LDI-FFRSSSLDRNSCMFKIDAVNLLSLSYKSNPTINCFLVNSTSIVDANIDLGFFCVQN 282

Query: 360 AELS------RLLRAFAHVKYLNVCNQTIKVIYSDHDLSNNWPTFHNV 485
            EL        L      V+ L + +QTI+ +       +  P+F N+
Sbjct: 283 NELHVAVFAIELFSRLGSVESLRLSDQTIQCLNYAKSALHLLPSFKNL 330


>ref|NP_177996.1| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75268062|sp|Q9ZV93.1|FDL10_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At1g78750
           gi|3834319|gb|AAC83035.1| Similar to gi|2244754 heat
           shock transcription factor HSF30 homolog from
           Arabidopsis thaliana chromosome 4 contig gb|Z97335
           [Arabidopsis thaliana] gi|332198025|gb|AEE36146.1|
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 458

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 17/178 (9%)
 Frame = +3

Query: 3   PKYISFPRLKCLKLHLFKFTDESWNEELFSNSRVLEELILDQ--CSVSMNFFCISIPTL- 173
           PK++S P LK L L + KF D    E L S   VLE L +++  C     F C+   +L 
Sbjct: 168 PKFVSLPSLKELHLSIVKFADHMALETLISQCPVLENLNINRSFCD-DFEFTCVRSQSLL 226

Query: 174 ---KLLKIDNWITKGNGLCDCILKIDAPRLVTFLYTSPVAKEFLLSNFPALEEAIID--- 335
               +   D  + +     D ++ IDAP+L     +      F+L++  +L EA ID   
Sbjct: 227 SFTHVADTDEMLNE-----DLVVAIDAPKLKYLRLSDHRIASFILNDLASLVEADIDTVF 281

Query: 336 --ICFEEYDGAELSR--LLRAF----AHVKYLNVCNQTIKVIYSDHDLSNNWPTFHNV 485
             IC + ++  +L++  ++R F    + +K L + + T++VIY D+      P F N+
Sbjct: 282 NLICKKMFNPNDLNKRNMIRDFLVGISSIKTLIIASSTLEVIY-DYSRCEPLPLFRNL 338


>ref|XP_003599952.1| FBD-associated F-box protein [Medicago truncatula]
           gi|355489000|gb|AES70203.1| FBD-associated F-box protein
           [Medicago truncatula]
          Length = 418

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 53/151 (35%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
 Frame = +3

Query: 15  SFPRLKCLKLHLFKFTDESWNE-------ELFSNSRVLEELILDQCSVSMNFFCI-SIPT 170
           SF   K +KLH  K    +W E        L SN +++E L L  C +S  F C  S   
Sbjct: 107 SFVETKLIKLHALKEVYFAWMELKNEAIKMLLSNCKMIESLSLKHCWMSTKFECDGSDLN 166

Query: 171 LKLLKID--NWITKGNGLCDCILKIDAPRLVTFLYTSPVAKEFLLSNFPALEEAIIDICF 344
           LK L ID  N+   G        KI+AP+L  F+Y   V   F + N   LEE  +    
Sbjct: 167 LKRLVIDDCNFFNVG-------FKINAPKLTCFMYYGKVIY-FKIENPLYLEEVDLYFSD 218

Query: 345 EEYDGAELSRLLRAFAHVKYLNVCNQTIKVI 437
           EE D          F HVK L VC+ T+KV+
Sbjct: 219 EEDD---------YFNHVKVLTVCSYTLKVL 240


>ref|NP_177997.1| putative F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75268063|sp|Q9ZV94.1|FDL11_ARATH RecName:
           Full=Putative F-box/FBD/LRR-repeat protein At1g78760
           gi|3834318|gb|AAC83034.1| Similar to gi|2244754 heat
           shock transcription factor HSF30 homolog from
           Arabidopsis thaliana chromosome 4 contig gb|Z97335
           [Arabidopsis thaliana] gi|332198026|gb|AEE36147.1|
           putative F-box/FBD/LRR-repeat protein [Arabidopsis
           thaliana]
          Length = 452

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 9/170 (5%)
 Frame = +3

Query: 3   PKYISFPRLKCLKLHLFKFTDESWNEELFSNSRVLEELILDQCSVSMNFFCISIPTLKLL 182
           PK IS P +K ++L + KF++    E++ S+   LE LI+ + SV  +   + + +  LL
Sbjct: 158 PKVISLPLVKVIELDIVKFSNALVLEKIISSCSALESLIISRSSVD-DINVLRVSSRSLL 216

Query: 183 KIDNWITKGNGLCDCILKIDAPRLVTFLYTSPVAKEFLLSNFPALEEAIIDICF--EEYD 356
              +     +G  +  + IDAP+L     +     +F + N  +L EA I+I F  EE  
Sbjct: 217 SFKHIGNCSDGWDELEVAIDAPKLEYLNISDHSTAKFKMKNSGSLVEAKINIIFNMEELP 276

Query: 357 GAE-------LSRLLRAFAHVKYLNVCNQTIKVIYSDHDLSNNWPTFHNV 485
                     +   L   + VK L + + T++VI   HDL    P F N+
Sbjct: 277 HPNDRPKRKMIQDFLAEISSVKKLFISSHTLEVI---HDLGCELPLFRNL 323


Top