BLASTX nr result

ID: Papaver23_contig00026741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026741
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containi...    81   2e-13
emb|CBI15328.3| unnamed protein product [Vitis vinifera]               81   2e-13
ref|XP_002514631.1| pentatricopeptide repeat-containing protein,...    81   2e-13

>ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like [Glycine max]
          Length = 509

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 46/84 (54%), Positives = 55/84 (65%)
 Frame = -1

Query: 258 STELLKQEDGDSLPLNKRLDLHFSXXXXXXXXXXXXXXXXLSPDAGRTTVLGFHQWISSR 79
           S+ELLK+ D D+L +++RL+L FS                 SP AGRT VLGFHQW+SS 
Sbjct: 71  SSELLKEPDSDALSVSQRLNLSFSHITPTPNLILQTLNL--SPQAGRT-VLGFHQWLSSN 127

Query: 78  PGFQHTDQTYSYLVDYFGRKKDFK 7
           P F HTD T SY VDYFGR+KDFK
Sbjct: 128 PQFSHTDDTLSYFVDYFGRRKDFK 151


>ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like isoform 1 [Glycine max]
           gi|356576706|ref|XP_003556471.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 509

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 44/84 (52%), Positives = 54/84 (64%)
 Frame = -1

Query: 258 STELLKQEDGDSLPLNKRLDLHFSXXXXXXXXXXXXXXXXLSPDAGRTTVLGFHQWISSR 79
           S+ELLK+ D D+L +++RL L FS                 S ++GRT VLGFHQW+SS 
Sbjct: 72  SSELLKEPDSDALSVSQRLHLSFSHITPTPNLILQTLNL--SHESGRT-VLGFHQWLSSN 128

Query: 78  PGFQHTDQTYSYLVDYFGRKKDFK 7
           P F HTD T SY VDYFGR+KDFK
Sbjct: 129 PQFSHTDDTLSYFVDYFGRRKDFK 152


>ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like [Vitis vinifera]
          Length = 516

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 43/86 (50%), Positives = 55/86 (63%)
 Frame = -1

Query: 258 STELLKQEDGDSLPLNKRLDLHFSXXXXXXXXXXXXXXXXLSPDAGRTTVLGFHQWISSR 79
           S+ELLK  D + +P+ +RL L FS                 SPDAGRT VLGF++W+SS 
Sbjct: 78  SSELLKDPDSEPVPIIQRLQLSFSHITPSPPLILQTLNT--SPDAGRT-VLGFYKWLSSN 134

Query: 78  PGFQHTDQTYSYLVDYFGRKKDFKII 1
           P F H+D+T S+ VDYFGR+KDFK I
Sbjct: 135 PKFVHSDETISFFVDYFGRRKDFKAI 160


>emb|CBI15328.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 43/86 (50%), Positives = 55/86 (63%)
 Frame = -1

Query: 258 STELLKQEDGDSLPLNKRLDLHFSXXXXXXXXXXXXXXXXLSPDAGRTTVLGFHQWISSR 79
           S+ELLK  D + +P+ +RL L FS                 SPDAGRT VLGF++W+SS 
Sbjct: 94  SSELLKDPDSEPVPIIQRLQLSFSHITPSPPLILQTLNT--SPDAGRT-VLGFYKWLSSN 150

Query: 78  PGFQHTDQTYSYLVDYFGRKKDFKII 1
           P F H+D+T S+ VDYFGR+KDFK I
Sbjct: 151 PKFVHSDETISFFVDYFGRRKDFKAI 176


>ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546235|gb|EEF47737.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 569

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 41/84 (48%), Positives = 54/84 (64%)
 Frame = -1

Query: 258 STELLKQEDGDSLPLNKRLDLHFSXXXXXXXXXXXXXXXXLSPDAGRTTVLGFHQWISSR 79
           S EL+K  + DSL + +RL+LHFS                LSPDAGRT VLGFHQW+   
Sbjct: 128 SAELIKNPNSDSLSILQRLNLHFSHINNSITPSIILQTLNLSPDAGRT-VLGFHQWLVKV 186

Query: 78  PGFQHTDQTYSYLVDYFGRKKDFK 7
             F++TD+T S+ +DYFGR+KDF+
Sbjct: 187 ANFKNTDETISFFIDYFGRRKDFQ 210


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