BLASTX nr result

ID: Papaver23_contig00026729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026729
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284532.2| PREDICTED: probable NOT transcription comple...   122   4e-26
emb|CBI16210.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_003547475.1| PREDICTED: probable NOT transcription comple...   117   1e-24
ref|XP_002530232.1| CCR4-NOT transcription complex subunit, puta...   115   4e-24
ref|XP_003543494.1| PREDICTED: probable NOT transcription comple...   113   1e-23

>ref|XP_002284532.2| PREDICTED: probable NOT transcription complex subunit VIP2-like
           [Vitis vinifera]
          Length = 666

 Score =  122 bits (305), Expect = 4e-26
 Identities = 74/161 (45%), Positives = 88/161 (54%), Gaps = 3/161 (1%)
 Frame = +1

Query: 1   MGRSGGFSFSESYPSARTQQHQQHAXXXXXXXXXXXXXNNQDF-QLHGSDLFPSSHSPYH 177
           MGRS GF+   SY S R QQ QQHA             NNQD   LHGSD+FPSSHS YH
Sbjct: 364 MGRSAGFNLGGSYSSHRPQQQQQHAPAVSSGGVSFSPVNNQDLLHLHGSDIFPSSHSTYH 423

Query: 178 SQVQSSGQPSMGLRXXXXXXXXXXX--YDLXXXXXXXXXXXXXXXXXXMPSASRLYRDRN 351
           SQ  +SG P +GLR             YD                   M + S+ +RD+ 
Sbjct: 424 SQ--TSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQQMSAVSQAFRDQG 481

Query: 352 MKSTHVPQASPDQYGLLGLLSVIRISDKPVSSLYLGIDLTS 474
           MKS    QA+PD +GLLGLLSVIR+SD  ++SL LGIDLT+
Sbjct: 482 MKSMQATQAAPDPFGLLGLLSVIRMSDPDLTSLALGIDLTT 522


>emb|CBI16210.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  122 bits (305), Expect = 4e-26
 Identities = 74/161 (45%), Positives = 88/161 (54%), Gaps = 3/161 (1%)
 Frame = +1

Query: 1   MGRSGGFSFSESYPSARTQQHQQHAXXXXXXXXXXXXXNNQDF-QLHGSDLFPSSHSPYH 177
           MGRS GF+   SY S R QQ QQHA             NNQD   LHGSD+FPSSHS YH
Sbjct: 326 MGRSAGFNLGGSYSSHRPQQQQQHAPAVSSGGVSFSPVNNQDLLHLHGSDIFPSSHSTYH 385

Query: 178 SQVQSSGQPSMGLRXXXXXXXXXXX--YDLXXXXXXXXXXXXXXXXXXMPSASRLYRDRN 351
           SQ  +SG P +GLR             YD                   M + S+ +RD+ 
Sbjct: 386 SQ--TSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQQMSAVSQAFRDQG 443

Query: 352 MKSTHVPQASPDQYGLLGLLSVIRISDKPVSSLYLGIDLTS 474
           MKS    QA+PD +GLLGLLSVIR+SD  ++SL LGIDLT+
Sbjct: 444 MKSMQATQAAPDPFGLLGLLSVIRMSDPDLTSLALGIDLTT 484


>ref|XP_003547475.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           [Glycine max]
          Length = 662

 Score =  117 bits (292), Expect = 1e-24
 Identities = 71/161 (44%), Positives = 85/161 (52%), Gaps = 3/161 (1%)
 Frame = +1

Query: 1   MGRSGGFSFSESYPSARTQQHQQHAXXXXXXXXXXXXXNNQDF-QLHGSDLFPSSHSPYH 177
           MGRS GFS   SYPS RTQQ QQHA             NNQD   LHG+D+FPSSHS YH
Sbjct: 360 MGRSAGFSLGGSYPSHRTQQQQQHAPSVSSNGVSFSSVNNQDLLHLHGTDIFPSSHSTYH 419

Query: 178 SQVQSSGQPSMGLRXXXXXXXXXXX--YDLXXXXXXXXXXXXXXXXXXMPSASRLYRDRN 351
           SQ  +SG P +GLR             YD                   M +A++ +RD+ 
Sbjct: 420 SQ--TSGPPGIGLRPLTSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQQMSAANQSFRDQG 477

Query: 352 MKSTHVPQASPDQYGLLGLLSVIRISDKPVSSLYLGIDLTS 474
           MKS    Q+SPD +G LGL SV+ ISD  +  L  GIDLT+
Sbjct: 478 MKSMQTAQSSPDPFGALGLFSVVHISDPNLKYLAHGIDLTT 518


>ref|XP_002530232.1| CCR4-NOT transcription complex subunit, putative [Ricinus communis]
           gi|223530236|gb|EEF32138.1| CCR4-NOT transcription
           complex subunit, putative [Ricinus communis]
          Length = 664

 Score =  115 bits (288), Expect = 4e-24
 Identities = 69/160 (43%), Positives = 88/160 (55%), Gaps = 2/160 (1%)
 Frame = +1

Query: 1   MGRSGGFSFSESYPSARTQQHQQHAXXXXXXXXXXXXXNNQDFQLHGSDLFPSSHSPYHS 180
           MGRS GF+   ++ S R QQ QQHA             NNQD  LHGSD+FPSSHS YHS
Sbjct: 364 MGRSAGFNLGGNFSSYRPQQQQQHAPAVSSSGVSFSPVNNQDL-LHGSDIFPSSHSTYHS 422

Query: 181 QVQSSGQPSMGLRXXXXXXXXXXX--YDLXXXXXXXXXXXXXXXXXXMPSASRLYRDRNM 354
           Q  ++G P +GLR             YD                   M + ++ +RD+ M
Sbjct: 423 Q--TNGPPGIGLRPLNSPNTVSGIGSYDQLIQQYQQHQNQSQFRLQQMSAVNQSFRDQGM 480

Query: 355 KSTHVPQASPDQYGLLGLLSVIRISDKPVSSLYLGIDLTS 474
           KS    Q++PD +GLLGLLSVIR+SD  ++SL LGIDLT+
Sbjct: 481 KSMQAAQSAPDPFGLLGLLSVIRMSDPDLTSLALGIDLTT 520


>ref|XP_003543494.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
           [Glycine max]
          Length = 628

 Score =  113 bits (283), Expect = 1e-23
 Identities = 69/161 (42%), Positives = 84/161 (52%), Gaps = 3/161 (1%)
 Frame = +1

Query: 1   MGRSGGFSFSESYPSARTQQHQQHAXXXXXXXXXXXXXNNQDF-QLHGSDLFPSSHSPYH 177
           MGR+ GFS    YPS RTQQ QQHA             NNQD   LHG+D+FPSSHS YH
Sbjct: 326 MGRTAGFSLGGLYPSHRTQQQQQHAPSVSSNGVSFSSVNNQDLLHLHGTDIFPSSHSTYH 385

Query: 178 SQVQSSGQPSMGLRXXXXXXXXXXX--YDLXXXXXXXXXXXXXXXXXXMPSASRLYRDRN 351
           SQ  +SG P +GLR             YD                   M SA++ +RD+ 
Sbjct: 386 SQ--TSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQQMSSANQSFRDQG 443

Query: 352 MKSTHVPQASPDQYGLLGLLSVIRISDKPVSSLYLGIDLTS 474
           MKS    Q++PD +G LGL SV+ ISD  +  L  GIDLT+
Sbjct: 444 MKSMQTAQSNPDPFGALGLFSVVHISDPNLKYLAHGIDLTT 484


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