BLASTX nr result

ID: Papaver23_contig00026680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026680
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         157   2e-36
emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera]   156   2e-36
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           155   4e-36
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]   154   8e-36
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   152   3e-35

>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  157 bits (396), Expect = 2e-36
 Identities = 71/130 (54%), Positives = 98/130 (75%), Gaps = 1/130 (0%)
 Frame = +2

Query: 107 KL*KHFWGEAMNIAVYLINQSPSRPLDGEAAEKVWRDKEPTYDHFKVFGCRAFVHIPKDQ 286
           KL   FW EA++ AV++IN SP   L  E  +KVW  K+ +YDH +VFGC+AFVH+P+D+
Sbjct: 599 KLPSSFWAEAVSTAVHVINLSPVIALKNEVPDKVWCGKDVSYDHLRVFGCKAFVHVPRDE 658

Query: 287 RSKLDDKAKQCVFLGYGTEKFGYRFWDPVEKKVIRSRDAVFLED*TIEDFEKIEMPKLQD 466
           RSKLD K +QC+F+GYG ++FGYR +DPVEKK++RSRD VF E+ TIED +K++ P+ +D
Sbjct: 659 RSKLDSKTRQCIFIGYGFDEFGYRLYDPVEKKLVRSRDVVFFENQTIEDIDKVKQPESRD 718

Query: 467 DMTL-DPNPV 493
             +L D  PV
Sbjct: 719 SGSLVDIEPV 728


>emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera]
          Length = 885

 Score =  156 bits (395), Expect = 2e-36
 Identities = 76/161 (47%), Positives = 111/161 (68%), Gaps = 2/161 (1%)
 Frame = +2

Query: 107 KL*KHFWGEAMNIAVYLINQSPSRPLDGEAAEKVWRDKEPTYDHFKVFGCRAFVHIPKDQ 286
           +L + FWGEA+N  V+++N +P  PL+ +  +++W + E +YD+ +VFGC+AFVHIPKD+
Sbjct: 391 QLPRSFWGEALNTVVHVLNLTPCVPLEFDVPDRIWSNNEISYDYLRVFGCKAFVHIPKDK 450

Query: 287 RSKLDDKAKQCVFLGYGTEKFGYRFWDPVEKKVIRSRDAVFLED*TIEDFEKIEMPKLQ- 463
           RSKLD K + CVF+GYG ++ GYRF+D V+KK++RSRDA+F+ED TI+D EK ++ K Q 
Sbjct: 451 RSKLDAKTRPCVFIGYGQDELGYRFYDQVQKKLVRSRDAMFMEDHTIQDIEKTDVTKFQY 510

Query: 464 DDMTLDPNPVVPTLEQHXXXXXXXXXXXXAHEDVP-VGDVE 583
            D  +D +PV  T                AH+D P +GDVE
Sbjct: 511 SDNLIDFDPVPLT-------HLPTQVEDEAHDDQPNIGDVE 544


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  155 bits (393), Expect = 4e-36
 Identities = 70/123 (56%), Positives = 94/123 (76%)
 Frame = +2

Query: 101 HFKL*KHFWGEAMNIAVYLINQSPSRPLDGEAAEKVWRDKEPTYDHFKVFGCRAFVHIPK 280
           H KL K FWGEA+  A Y++N SP  PL  +A EK+W  ++ +YD  +VFGC+A+VH+PK
Sbjct: 599 HSKLPKAFWGEALVTAAYVLNHSPCVPLQYKAPEKIWLGRDISYDQLRVFGCKAYVHVPK 658

Query: 281 DQRSKLDDKAKQCVFLGYGTEKFGYRFWDPVEKKVIRSRDAVFLED*TIEDFEKIEMPKL 460
           D+RSKLD K ++CVF+GYG +  GY+F+DPVEKK++RSRD VF+ED TIED +K+E  K 
Sbjct: 659 DERSKLDVKTRECVFIGYGQDMLGYKFYDPVEKKLVRSRDVVFVEDQTIEDIDKVE--KS 716

Query: 461 QDD 469
            DD
Sbjct: 717 TDD 719


>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score =  154 bits (390), Expect = 8e-36
 Identities = 77/163 (47%), Positives = 108/163 (66%), Gaps = 4/163 (2%)
 Frame = +2

Query: 107 KL*KHFWGEAMNIAVYLINQSPSRPLDGEAAEKVWRDKEPTYDHFKVFGCRAFVHIPKDQ 286
           +L + FWGEA+N  V+++N +P  PL+ +  +++W   E +YDH +VFGC+AFVHIPKD+
Sbjct: 484 QLPRSFWGEALNTVVHVLNLTPCVPLEFDVPDRIWSKNEISYDHLRVFGCKAFVHIPKDE 543

Query: 287 RSKLDDKAKQCVFLGYGTEKFGYRFWDPVEKKVIRSRDAVFLED*TIEDFEK---IEMPK 457
           RSKLD K + CVF+GYG ++ GYRF+DPV+KK++RSRD VF+ED TI+D EK   +E   
Sbjct: 544 RSKLDAKTRPCVFIGYGQDELGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEKTNPMESQH 603

Query: 458 LQDDMTLDPNPVVPTLEQHXXXXXXXXXXXXAHEDV-PVGDVE 583
             D + LDP P+     Q             AH+D   +GDVE
Sbjct: 604 SGDLIDLDPAPLTNLPTQ---------VEDEAHDDQHDMGDVE 637


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score =  152 bits (385), Expect = 3e-35
 Identities = 69/103 (66%), Positives = 82/103 (79%)
 Frame = +2

Query: 107 KL*KHFWGEAMNIAVYLINQSPSRPLDGEAAEKVWRDKEPTYDHFKVFGCRAFVHIPKDQ 286
           KL K FWGEA+  A YLIN+SPS PL  E  E+VW +KE +Y H KVFGCRAF H+PK+Q
Sbjct: 604 KLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQ 663

Query: 287 RSKLDDKAKQCVFLGYGTEKFGYRFWDPVEKKVIRSRDAVFLE 415
           R+KLDDK+  C+F+GYG E+FGYR WDPV+KKVIRSRD VF E
Sbjct: 664 RTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRE 706