BLASTX nr result

ID: Papaver23_contig00026672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026672
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...    61   2e-07
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    58   2e-06
ref|XP_002862357.1| hypothetical protein ARALYDRAFT_333370 [Arab...    56   6e-06

>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
           gi|223528011|gb|EEF30092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 57/183 (31%), Positives = 83/183 (45%), Gaps = 23/183 (12%)
 Frame = -3

Query: 631 VLANGSLYWLDYRQK-----KIVAFDLADEEFRWLPTVPQCFDGGQKVSYQIKVVGGNLC 467
           V+ NG L+WL  R +     ++++FDLADE+FR +P  P     G+  S+   + G   C
Sbjct: 235 VVVNGRLHWLSCRYRNQSLRRLISFDLADEQFREVPC-PVGASFGRHCSHLATLRG---C 290

Query: 466 LVHIEKG-QRIDIWAYKKMQKNGNDDKEMGHQSWGWTLEFTI-----------PSSSILD 323
           L  + +G +R+ IW  K          E G +   W  EFTI           P+ SI +
Sbjct: 291 LSGVVQGFRRLYIWVMK----------EYGVKE-SWVKEFTIGVKLPRELEPYPNQSI-N 338

Query: 322 KLDLHEPFALTK------NNEVLLWLNNKCLYCYDRKTETLKEIVDEDDNLRTFQGIPHM 161
             + H P + TK      N E+LL      L CYD K+   KE++   D       I H+
Sbjct: 339 LQEFHLPLSQTKVLCLLNNGEILLEFRCGTLVCYDTKSGAFKELIIFQDLPEWSNAIVHV 398

Query: 160 NSL 152
            SL
Sbjct: 399 GSL 401


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
 Frame = -3

Query: 634 GVLANGSLYWLDYRQ------KKIVAFDLADEEFRWLPTVPQCFDGGQKVSYQIKVVGGN 473
           G+ ANG+L+WL  +         IVA DL  E++  +P  P+  D     +  + V+ G 
Sbjct: 200 GIYANGALHWLVSQDPDSTVADTIVALDLGVEDYHVVPK-PEFVD--MNCNMGVGVLQGC 256

Query: 472 LCLVHIEKGQRIDIWAYKKMQKNGNDDKEMGHQSWGWTLEFTIPSSSILDKLDLHEPFAL 293
           L L+   + +R+D+W  ++        KE       W+  F++    ++  L   +P A 
Sbjct: 257 LSLLAYARSERVDVWVMEEYMV-----KE------SWSKLFSVARLEVIGILRSLKPLAY 305

Query: 292 TKN-NEVLLWLNNKCLYCYDRKTETLKEIVDEDDNLRTFQGIPHMNSLVSLKA--LGEKF 122
           +K+ NEVL+  +N  L+ YD K + +  +  +   + TF+    + SLV L A  L  + 
Sbjct: 306 SKSGNEVLIEHDNVNLFWYDLKRKEVVNVWIQGVPI-TFEAEICVGSLVPLNANRLRRRP 364

Query: 121 KSRIRQNKEKKK*DHFL 71
           K   ++ K +KK D FL
Sbjct: 365 KHEHKETKNRKKRDDFL 381


>ref|XP_002862357.1| hypothetical protein ARALYDRAFT_333370 [Arabidopsis lyrata subsp.
           lyrata] gi|297307786|gb|EFH38615.1| hypothetical protein
           ARALYDRAFT_333370 [Arabidopsis lyrata subsp. lyrata]
          Length = 400

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 13/201 (6%)
 Frame = -3

Query: 634 GVLANGSLYWLDYRQKKIVA------FDLADEEFRWLPTVPQCFDGGQKVSYQIKVVGGN 473
           GVLAN  L+W+  R++ I+A      FDLA ++   L + P+      +    I V+ G 
Sbjct: 210 GVLANNHLHWILPRRQGIIAFNAIIRFDLASDDLGVL-SFPRAL--YTEDDMDIGVLDGC 266

Query: 472 LCLVHIEKGQRIDIWAYKKMQKNGNDDKEMGHQSW-GWTLEFTIPSSSILDKLDLHEPFA 296
           +CL+  ++   +D+W  K+            ++ W  WT  F +P    ++ +D   P  
Sbjct: 267 VCLMCYDEFSHVDVWVLKE------------YEDWKSWTKLFRVPKPESVESVDFMRPMV 314

Query: 295 LTKN-NEVLLWLNNKC-LYCYDRKTETLKEIVDEDDNLRTFQGIPHMNSLVSLKALGEKF 122
            +K+ +++LL +NN   L  +D ++++L  +  E D+  +F     ++SLV L   G+  
Sbjct: 315 YSKDRSKILLEINNAANLMWFDLESKSLTTVGIECDS--SFTADILVSSLV-LGCKGDPT 371

Query: 121 KSRIRQN----KEKKK*DHFL 71
           K++ R++    K  K+ D FL
Sbjct: 372 KAQRRKDQMMPKSNKRWDGFL 392


Top