BLASTX nr result

ID: Papaver23_contig00026549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026549
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   100   4e-19
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    94   3e-17
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    92   1e-16
ref|XP_002515858.1| conserved hypothetical protein [Ricinus comm...    92   2e-16
gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Ja...    90   7e-16

>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  100 bits (249), Expect = 4e-19
 Identities = 62/177 (35%), Positives = 90/177 (50%)
 Frame = -3

Query: 809  LVSFLLHTDAYVGKWILSCIYGAIHDEDKIVQWSAIQQLSENYNLSGILLGDLNTTLAES 630
            +VSFL  +DA+V K  ++ +YG  HD +K   W  +       +L  ++LGD N  L  S
Sbjct: 695  VVSFL--SDAFVCK--ITWMYGNPHDNEKRAFWRLMYSRFPVQSLPWLVLGDFNEVLDPS 750

Query: 629  VKQGGSSASHKRHAYVAQIFRNLGLTDVIWSGDPFTWSNHRAGEHLIRVRLYRALANTSW 450
             K GG      R         N  L D+ + G  F+W   R G   I+ RL RAL N +W
Sbjct: 751  EKWGGGPPLPWRIKLFRDFLNNGHLRDLHFKGPGFSWFAMRHGRVFIKERLDRALGNIAW 810

Query: 449  HKNFPHAQLTNLIPIGSDHAPVLLVTNQVNTNKSRPFCLFEYWLAHKDCKSVIEHAW 279
              + P+ Q+ +L  IGSDH P+LL +N    NK+R F   + W  H++   VI+ +W
Sbjct: 811  SSSQPNTQILHLPKIGSDHRPLLLDSNPKMLNKTRLFRFEQMWTTHEEYSDVIQRSW 867


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 58/171 (33%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
 Frame = -3

Query: 773 GKWILSCIYGAIHDEDKIVQWSAIQQLSENYNLSGILLGDLNTTLAESVKQGGSSASHKR 594
           G  I  C+YG  H E K   W+ ++ L +N     ++ GD N  L    KQGG   +   
Sbjct: 344 GLAIQPCLYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQGGRMKAQSA 403

Query: 593 HAYVAQIFRNLGLTDVIWSGDPFTWSNH-RAGEHLIRVRLYRALANTSWHKNFPHAQLTN 417
                    + GL D+ + GD FTW NH  + E  IR RL RA+AN  W   FP A++ N
Sbjct: 404 MDEFRHALTDCGLDDLGFEGDAFTWRNHSHSQEGYIRERLDRAVANPEWRAMFPAARVIN 463

Query: 416 LIPIGSDHAPVLLVTNQVN-----TNKSRPFCLFEYWLAHKDCKSVIEHAW 279
             P  SDH PV++     N      N    F     WL  +  K V++ AW
Sbjct: 464 GDPRHSDHRPVIIELEGKNKGVRGRNGHNDFRFEAAWLEEEKFKEVVKEAW 514


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 3/166 (1%)
 Frame = -3

Query: 767 WILSCIYGAIHDEDKIVQWSAIQQLSENYNLSGILLGDLNTTLAESVKQGGSSASHKRHA 588
           W    IYG     +K + WS +++L +  +L  +  GD N   +   K+GG+    +   
Sbjct: 100 WNAMGIYGWPETSNKHLTWSLLRRLKQQCSLPVLFFGDFNEITSIEEKEGGAPRCERVMD 159

Query: 587 YVAQIFRNLGLTDVIWSGDPFTWSNHRAGEHLIRVRLYRALANTSWHKNFPHAQLTNLIP 408
              ++  +  + D+ + G+ FTW    +   LIR RL R LAN  W  NFP  ++ +L  
Sbjct: 160 AFREVIDDCAVKDLGYVGNRFTWQRGNSPSTLIRERLDRMLANDEWCDNFPSWEVVHLPR 219

Query: 407 IGSDHAPVLLVTNQVNTNKSRPFCLFEY---WLAHKDCKSVIEHAW 279
             SDHAP+LL T  VN +  R   LF++   WL+ ++C  ++E AW
Sbjct: 220 YRSDHAPLLLKTG-VNDSFRRGNKLFKFEAMWLSKEECGKIVEEAW 264


>ref|XP_002515858.1| conserved hypothetical protein [Ricinus communis]
           gi|223545013|gb|EEF46527.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 53/174 (30%), Positives = 81/174 (46%)
 Frame = -3

Query: 749 YGAIHDEDKIVQWSAIQQLSENYNLSGILLGDLNTTLAESVKQGGSSASHKRHAYVAQIF 570
           YG    E +   W  I  L    + S + +GD ++ ++ S K+GG     K+    +   
Sbjct: 83  YGEPTKEFREEVWKRISSLKPPPHSSLVCVGDFSSIVSPSEKKGGRRPDDKQLQLFSDFV 142

Query: 569 RNLGLTDVIWSGDPFTWSNHRAGEHLIRVRLYRALANTSWHKNFPHAQLTNLIPIGSDHA 390
               L DV + G  +TWSN + G+  +  RL RALA+  W   FP+AQ+ +   +GSDH 
Sbjct: 143 NRNELIDVGFKGTMYTWSNKQLGDKCVMERLDRALASLEWRCQFPNAQIIHEYMLGSDHH 202

Query: 389 PVLLVTNQVNTNKSRPFCLFEYWLAHKDCKSVIEHAWKXXXXXXXXXXXSTKLE 228
           P++L+    + +K R F   E W     CK V+E  W             TKL+
Sbjct: 203 PLVLMEQAGSFSKKRLFRFEEKWKLRDRCKEVVEDCWMEHQREDSGWNCVTKLQ 256


>gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1739

 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
 Frame = -3

Query: 761  LSCIYGAIHDEDKIVQWSAIQQ-LSENYNLSGILLGDLNTTLAESVKQGGSSASHKRHAY 585
            L CIYG          WS I   +  + +     +GDLN  +  + K G +  +  R   
Sbjct: 872  LLCIYGDPSHRATSAMWSEISSFVVHSSHKPTFCMGDLNEIMHANEKYGLAPPNQNRINI 931

Query: 584  VAQIFRNLGLTDVIWSGDPFTWSNHRAGEHLIRVRLYRALANTSWHKNFPHAQLTNLIPI 405
                  NLGL D+ ++G  +TWSN + G+ L+  RL R LAN  W  N+P+  + +L  +
Sbjct: 932  FKHHVNNLGLMDMGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPNTTVYHLPML 991

Query: 404  GSDHAPVLLVTNQVNTNKSRPFCLFEYWLAHKDCKSVIEHAW 279
             SDHAP++ + N  N    R F    +WL   D       AW
Sbjct: 992  YSDHAPIIAILNPKNRRPKRSFMFENWWLLEPDFNQHAHSAW 1033


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