BLASTX nr result

ID: Papaver23_contig00025322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025322
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001152419.1| LOC100286059 [Zea mays] gi|195656099|gb|ACG4...    59   2e-09
gb|ACN29168.1| unknown [Zea mays] gi|413920349|gb|AFW60281.1| sp...    59   2e-09
emb|CBI25913.3| unnamed protein product [Vitis vinifera]               50   7e-09
ref|XP_003635431.1| PREDICTED: splicing factor U2af large subuni...    50   8e-09
gb|AFW60280.1| hypothetical protein ZEAMMB73_339264 [Zea mays]         57   1e-08

>ref|NP_001152419.1| LOC100286059 [Zea mays] gi|195656099|gb|ACG47517.1| splicing factor
           U2AF 65 kDa subunit [Zea mays]
          Length = 596

 Score = 58.9 bits (141), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = -2

Query: 566 KVVTCLELVSADELRDDEEYNDIVEDMREEGAKFG 462
           KVV   ++V+ADELRDDEEYNDIVEDMREEG K+G
Sbjct: 496 KVVCLTQVVTADELRDDEEYNDIVEDMREEGRKYG 530



 Score = 29.3 bits (64), Expect(2) = 2e-09
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 630 DQENIL*QAQHHMDTQKIVLQEGSNLP 550
           +QE+IL QAQ  +  QK+V Q G  LP
Sbjct: 468 EQESILLQAQQQVQMQKLVYQVGGALP 494


>gb|ACN29168.1| unknown [Zea mays] gi|413920349|gb|AFW60281.1| splicing factor U2AF
           subunit [Zea mays]
          Length = 594

 Score = 58.9 bits (141), Expect(2) = 2e-09
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = -2

Query: 566 KVVTCLELVSADELRDDEEYNDIVEDMREEGAKFG 462
           KVV   ++V+ADELRDDEEYNDIVEDMREEG K+G
Sbjct: 494 KVVCLTQVVTADELRDDEEYNDIVEDMREEGRKYG 528



 Score = 29.3 bits (64), Expect(2) = 2e-09
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 630 DQENIL*QAQHHMDTQKIVLQEGSNLP 550
           +QE+IL QAQ  +  QK+V Q G  LP
Sbjct: 466 EQESILLQAQQQVQMQKLVYQVGGALP 492


>emb|CBI25913.3| unnamed protein product [Vitis vinifera]
          Length = 6467

 Score = 49.7 bits (117), Expect(2) = 7e-09
 Identities = 21/35 (60%), Positives = 28/35 (80%)
 Frame = -2

Query: 566  KVVTCLELVSADELRDDEEYNDIVEDMREEGAKFG 462
            KV+   E+++ DELRDDE Y +I+EDMR+EG KFG
Sbjct: 6366 KVLCLTEVINIDELRDDEAYEEILEDMRDEGGKFG 6400



 Score = 36.6 bits (83), Expect(2) = 7e-09
 Identities = 19/31 (61%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -1

Query: 630  DQENIL*QAQHHMDTQKIVLQEGS-NLPGIG 541
            +Q+NIL QAQ H+  QKI LQ G  NLPG G
Sbjct: 6324 EQDNILAQAQQHIAIQKIALQAGGLNLPGAG 6354


>ref|XP_003635431.1| PREDICTED: splicing factor U2af large subunit B-like, partial
           [Vitis vinifera]
          Length = 238

 Score = 49.7 bits (117), Expect(2) = 8e-09
 Identities = 21/35 (60%), Positives = 28/35 (80%)
 Frame = -2

Query: 566 KVVTCLELVSADELRDDEEYNDIVEDMREEGAKFG 462
           KV+   E+++ DELRDDE Y +I+EDMR+EG KFG
Sbjct: 137 KVLCLTEVINIDELRDDEAYEEILEDMRDEGGKFG 171



 Score = 36.6 bits (83), Expect(2) = 8e-09
 Identities = 19/31 (61%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -1

Query: 630 DQENIL*QAQHHMDTQKIVLQEGS-NLPGIG 541
           +Q+NIL QAQ H+  QKI LQ G  NLPG G
Sbjct: 95  EQDNILAQAQQHIAIQKIALQAGGLNLPGAG 125


>gb|AFW60280.1| hypothetical protein ZEAMMB73_339264 [Zea mays]
          Length = 549

 Score = 56.6 bits (135), Expect(2) = 1e-08
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -2

Query: 566 KVVTCLELVSADELRDDEEYNDIVEDMREEGAKF 465
           KVV   ++V+ADELRDDEEYNDIVEDMREEG K+
Sbjct: 494 KVVCLTQVVTADELRDDEEYNDIVEDMREEGRKY 527



 Score = 29.3 bits (64), Expect(2) = 1e-08
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 630 DQENIL*QAQHHMDTQKIVLQEGSNLP 550
           +QE+IL QAQ  +  QK+V Q G  LP
Sbjct: 466 EQESILLQAQQQVQMQKLVYQVGGALP 492