BLASTX nr result
ID: Papaver23_contig00025322
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver23_contig00025322 (816 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001152419.1| LOC100286059 [Zea mays] gi|195656099|gb|ACG4... 59 2e-09 gb|ACN29168.1| unknown [Zea mays] gi|413920349|gb|AFW60281.1| sp... 59 2e-09 emb|CBI25913.3| unnamed protein product [Vitis vinifera] 50 7e-09 ref|XP_003635431.1| PREDICTED: splicing factor U2af large subuni... 50 8e-09 gb|AFW60280.1| hypothetical protein ZEAMMB73_339264 [Zea mays] 57 1e-08 >ref|NP_001152419.1| LOC100286059 [Zea mays] gi|195656099|gb|ACG47517.1| splicing factor U2AF 65 kDa subunit [Zea mays] Length = 596 Score = 58.9 bits (141), Expect(2) = 2e-09 Identities = 27/35 (77%), Positives = 31/35 (88%) Frame = -2 Query: 566 KVVTCLELVSADELRDDEEYNDIVEDMREEGAKFG 462 KVV ++V+ADELRDDEEYNDIVEDMREEG K+G Sbjct: 496 KVVCLTQVVTADELRDDEEYNDIVEDMREEGRKYG 530 Score = 29.3 bits (64), Expect(2) = 2e-09 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -1 Query: 630 DQENIL*QAQHHMDTQKIVLQEGSNLP 550 +QE+IL QAQ + QK+V Q G LP Sbjct: 468 EQESILLQAQQQVQMQKLVYQVGGALP 494 >gb|ACN29168.1| unknown [Zea mays] gi|413920349|gb|AFW60281.1| splicing factor U2AF subunit [Zea mays] Length = 594 Score = 58.9 bits (141), Expect(2) = 2e-09 Identities = 27/35 (77%), Positives = 31/35 (88%) Frame = -2 Query: 566 KVVTCLELVSADELRDDEEYNDIVEDMREEGAKFG 462 KVV ++V+ADELRDDEEYNDIVEDMREEG K+G Sbjct: 494 KVVCLTQVVTADELRDDEEYNDIVEDMREEGRKYG 528 Score = 29.3 bits (64), Expect(2) = 2e-09 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -1 Query: 630 DQENIL*QAQHHMDTQKIVLQEGSNLP 550 +QE+IL QAQ + QK+V Q G LP Sbjct: 466 EQESILLQAQQQVQMQKLVYQVGGALP 492 >emb|CBI25913.3| unnamed protein product [Vitis vinifera] Length = 6467 Score = 49.7 bits (117), Expect(2) = 7e-09 Identities = 21/35 (60%), Positives = 28/35 (80%) Frame = -2 Query: 566 KVVTCLELVSADELRDDEEYNDIVEDMREEGAKFG 462 KV+ E+++ DELRDDE Y +I+EDMR+EG KFG Sbjct: 6366 KVLCLTEVINIDELRDDEAYEEILEDMRDEGGKFG 6400 Score = 36.6 bits (83), Expect(2) = 7e-09 Identities = 19/31 (61%), Positives = 22/31 (70%), Gaps = 1/31 (3%) Frame = -1 Query: 630 DQENIL*QAQHHMDTQKIVLQEGS-NLPGIG 541 +Q+NIL QAQ H+ QKI LQ G NLPG G Sbjct: 6324 EQDNILAQAQQHIAIQKIALQAGGLNLPGAG 6354 >ref|XP_003635431.1| PREDICTED: splicing factor U2af large subunit B-like, partial [Vitis vinifera] Length = 238 Score = 49.7 bits (117), Expect(2) = 8e-09 Identities = 21/35 (60%), Positives = 28/35 (80%) Frame = -2 Query: 566 KVVTCLELVSADELRDDEEYNDIVEDMREEGAKFG 462 KV+ E+++ DELRDDE Y +I+EDMR+EG KFG Sbjct: 137 KVLCLTEVINIDELRDDEAYEEILEDMRDEGGKFG 171 Score = 36.6 bits (83), Expect(2) = 8e-09 Identities = 19/31 (61%), Positives = 22/31 (70%), Gaps = 1/31 (3%) Frame = -1 Query: 630 DQENIL*QAQHHMDTQKIVLQEGS-NLPGIG 541 +Q+NIL QAQ H+ QKI LQ G NLPG G Sbjct: 95 EQDNILAQAQQHIAIQKIALQAGGLNLPGAG 125 >gb|AFW60280.1| hypothetical protein ZEAMMB73_339264 [Zea mays] Length = 549 Score = 56.6 bits (135), Expect(2) = 1e-08 Identities = 26/34 (76%), Positives = 30/34 (88%) Frame = -2 Query: 566 KVVTCLELVSADELRDDEEYNDIVEDMREEGAKF 465 KVV ++V+ADELRDDEEYNDIVEDMREEG K+ Sbjct: 494 KVVCLTQVVTADELRDDEEYNDIVEDMREEGRKY 527 Score = 29.3 bits (64), Expect(2) = 1e-08 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -1 Query: 630 DQENIL*QAQHHMDTQKIVLQEGSNLP 550 +QE+IL QAQ + QK+V Q G LP Sbjct: 466 EQESILLQAQQQVQMQKLVYQVGGALP 492