BLASTX nr result

ID: Papaver23_contig00025215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025215
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...   110   2e-22
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...   110   2e-22
ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S...   106   2e-21
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   100   2e-19
ref|XP_002438972.1| hypothetical protein SORBIDRAFT_10g029210 [S...    99   4e-19

>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/148 (36%), Positives = 82/148 (55%)
 Frame = +3

Query: 18   KKTHYINWSWFTTSKDQGGIGLRSLEHLNMALVAKLAWRFLSEPDTLWGKLIQAKYLRGN 197
            KK H+ +WSW +T K  GG+G R     N A++ +  WR L++PD+L  ++++ +Y   +
Sbjct: 849  KKMHWKSWSWLSTPKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNS 908

Query: 198  SFWNVKKPQRCSSTWSSLLESRNYLKSGCLWLIGDGKTIKVWTDXXXXXXXXXXXXLLAN 377
            SFW   +P+  S TW SLL  R  L  G  W +GDGKTIK+++D             L+ 
Sbjct: 909  SFWEAAQPKSPSFTWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWIPGFRPQLVTTLSP 968

Query: 378  IRTTINTVEDMITKEERKWNIDLIN*LF 461
              T   TV  ++ ++ R W+ DLI  LF
Sbjct: 969  FPTDA-TVSCLMNEDARCWDGDLIRSLF 995


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
            protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/148 (36%), Positives = 82/148 (55%)
 Frame = +3

Query: 18   KKTHYINWSWFTTSKDQGGIGLRSLEHLNMALVAKLAWRFLSEPDTLWGKLIQAKYLRGN 197
            KK H+ +WSW +T K  GG+G R     N A++ +  WR L++PD+L  ++++ +Y   +
Sbjct: 806  KKMHWKSWSWLSTPKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNS 865

Query: 198  SFWNVKKPQRCSSTWSSLLESRNYLKSGCLWLIGDGKTIKVWTDXXXXXXXXXXXXLLAN 377
            SFW   +P+  S TW SLL  R  L  G  W +GDGKTIK+++D             L+ 
Sbjct: 866  SFWEAAQPKSPSFTWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWIPGFRPQLVTTLSP 925

Query: 378  IRTTINTVEDMITKEERKWNIDLIN*LF 461
              T   TV  ++ ++ R W+ DLI  LF
Sbjct: 926  FPTDA-TVSCLMNEDARCWDGDLIRSLF 952


>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
           gi|241922442|gb|EER95586.1| hypothetical protein
           SORBIDRAFT_01g048580 [Sorghum bicolor]
          Length = 517

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/149 (34%), Positives = 80/149 (53%)
 Frame = +3

Query: 21  KTHYINWSWFTTSKDQGGIGLRSLEHLNMALVAKLAWRFLSEPDTLWGKLIQAKYLRGNS 200
           K H+++W   T SK +GG+G R L H N+A++A+ AWR L EPDTL G++++A+Y   ++
Sbjct: 259 KIHWLSWEKLTLSKKRGGLGFRDLYHFNLAMLARQAWRILIEPDTLCGRVLKARYFPNSN 318

Query: 201 FWNVKKPQRCSSTWSSLLESRNYLKSGCLWLIGDGKTIKVWTDXXXXXXXXXXXXLLANI 380
               K       TW S+++  N LK G +W IG G  + +WTD            +    
Sbjct: 319 ILQCKARAGILYTWRSIIDGINLLKEGIIWRIGSGSNVNIWTD-PWIPRGTTRKPITPRG 377

Query: 381 RTTINTVEDMITKEERKWNIDLIN*LFDP 467
           R  I  V D+I      W+ +LI+ +F P
Sbjct: 378 RYLITKVSDLINPSTGTWDENLISDVFWP 406


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/149 (32%), Positives = 82/149 (55%)
 Frame = +3

Query: 21  KTHYINWSWFTTSKDQGGIGLRSLEHLNMALVAKLAWRFLSEPDTLWGKLIQAKYLRGNS 200
           K H+I+W   T SK++GG+G R L   N+A++++ AWR L+ PD+L G++++A+Y   + 
Sbjct: 416 KIHWISWEKLTQSKEKGGLGFRDLHLFNLAMLSRQAWRLLTNPDSLCGQVLKARYFPHSD 475

Query: 201 FWNVKKPQRCSSTWSSLLESRNYLKSGCLWLIGDGKTIKVWTDXXXXXXXXXXXXLLANI 380
             +     R S TW S+L+    LK G +W IG+GK +K+W +            +    
Sbjct: 476 ILHCSPRPRISYTWRSILKGVALLKEGIIWRIGNGKNVKIW-EHPWIPKGITRKPITPRG 534

Query: 381 RTTINTVEDMITKEERKWNIDLIN*LFDP 467
            + +  V ++I     +W+  L+N LF P
Sbjct: 535 ASLLTRVNELINPVTGEWDEQLVNDLFWP 563


>ref|XP_002438972.1| hypothetical protein SORBIDRAFT_10g029210 [Sorghum bicolor]
           gi|241917195|gb|EER90339.1| hypothetical protein
           SORBIDRAFT_10g029210 [Sorghum bicolor]
          Length = 240

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/147 (32%), Positives = 77/147 (52%)
 Frame = +3

Query: 21  KTHYINWSWFTTSKDQGGIGLRSLEHLNMALVAKLAWRFLSEPDTLWGKLIQAKYLRGNS 200
           K H+I+W      K++GG+G R L   N+A++A+ AWR L  PD+L G++++AKY R   
Sbjct: 79  KMHWISWDTMCRRKEEGGLGFRDLHLFNLAMLARQAWRLLMTPDSLCGQVLKAKYYRNCG 138

Query: 201 FWNVKKPQRCSSTWSSLLESRNYLKSGCLWLIGDGKTIKVWTDXXXXXXXXXXXXLLANI 380
             + K+    S TW S+L     LK G +W +GDG +IK+W +            +    
Sbjct: 139 LLDAKEAPGISYTWRSILRGIKALKDGLIWCVGDGNSIKIWLN-PWIPRGVTRMPITPRG 197

Query: 381 RTTINTVEDMITKEERKWNIDLIN*LF 461
            T I  + D+I +    W+  L+  +F
Sbjct: 198 HTLITHISDLIDQNTGDWDQVLVRDIF 224


Top